TGME49_260510 | ubiquitin thioesterase otubain-like family protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_260510OTHER0.9731950.0170160.009789
No Results

  • Fasta :-

    >TGME49_260510 MTAHISAVSFTFFWSLKDERPAKKPGRKPGGSSGKLTLIHTKTVSSDFVAHQKNLQHKRG QQRPYSLRVRPVGFSVWNIFGRGSPELRCVLASSYGHELYAAKYLEISRGGLLLRHWRPS AVHFPFSSRGALPCHLPSLLLLAEIVSNGGKSVFIEQFTLAFLVNKLNMADSNGGVEPVA DPNTSAGPMAEAPRTPQENEGNSLPEWQQEIESQPLVGKVESLDCLCRDFEGNPALCAKA RTFVKEQQQRRDACCSPSPTEDRAQGAEENEREAGHSHEDALHGAEGTWTMRRVRKDGCC FYRAYMYGVFLCFLRQREKIKSFIKRINDELLPKVQEVNAGAETVADFAEETVENLEKLE SPEANTQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSELYLPFLTAYATVEDYCSHEVD PMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEVPVRHIFPHSDDAQIHLIYRPGHYDFF FYSPRQAGAHQST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_260510.fa Sequence name : TGME49_260510 Sequence length : 493 VALUES OF COMPUTED PARAMETERS Coef20 : 4.520 CoefTot : 0.388 ChDiff : -10 ZoneTo : 17 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.559 0.322 0.590 MesoH : -0.174 0.475 -0.295 0.270 MuHd_075 : 18.064 6.821 5.191 1.301 MuHd_095 : 14.717 14.303 4.235 3.192 MuHd_100 : 18.670 14.771 6.178 3.288 MuHd_105 : 17.210 12.151 6.975 2.493 Hmax_075 : 15.517 9.800 1.415 4.305 Hmax_095 : 14.788 14.000 0.872 5.302 Hmax_100 : 18.500 15.700 2.676 5.310 Hmax_105 : 15.700 13.000 2.421 4.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8644 0.1356 DFMC : 0.8256 0.1744
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 493 TGME49_260510 MTAHISAVSFTFFWSLKDERPAKKPGRKPGGSSGKLTLIHTKTVSSDFVAHQKNLQHKRGQQRPYSLRVRPVGFSVWNIF 80 GRGSPELRCVLASSYGHELYAAKYLEISRGGLLLRHWRPSAVHFPFSSRGALPCHLPSLLLLAEIVSNGGKSVFIEQFTL 160 AFLVNKLNMADSNGGVEPVADPNTSAGPMAEAPRTPQENEGNSLPEWQQEIESQPLVGKVESLDCLCRDFEGNPALCAKA 240 RTFVKEQQQRRDACCSPSPTEDRAQGAEENEREAGHSHEDALHGAEGTWTMRRVRKDGCCFYRAYMYGVFLCFLRQREKI 320 KSFIKRINDELLPKVQEVNAGAETVADFAEETVENLEKLESPEANTQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSEL 400 YLPFLTAYATVEDYCSHEVDPMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEVPVRHIFPHSDDAQIHLIYRPGHYDFF 480 FYSPRQAGAHQST 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_260510 17 TFFWSLK|DE 0.069 . TGME49_260510 20 WSLKDER|PA 0.084 . TGME49_260510 23 KDERPAK|KP 0.159 . TGME49_260510 24 DERPAKK|PG 0.094 . TGME49_260510 27 PAKKPGR|KP 0.105 . TGME49_260510 28 AKKPGRK|PG 0.091 . TGME49_260510 35 PGGSSGK|LT 0.067 . TGME49_260510 42 LTLIHTK|TV 0.077 . TGME49_260510 53 DFVAHQK|NL 0.068 . TGME49_260510 58 QKNLQHK|RG 0.069 . TGME49_260510 59 KNLQHKR|GQ 0.147 . TGME49_260510 63 HKRGQQR|PY 0.101 . TGME49_260510 68 QRPYSLR|VR 0.080 . TGME49_260510 70 PYSLRVR|PV 0.151 . TGME49_260510 82 VWNIFGR|GS 0.105 . TGME49_260510 88 RGSPELR|CV 0.125 . TGME49_260510 103 HELYAAK|YL 0.079 . TGME49_260510 109 KYLEISR|GG 0.066 . TGME49_260510 115 RGGLLLR|HW 0.098 . TGME49_260510 118 LLLRHWR|PS 0.214 . TGME49_260510 129 HFPFSSR|GA 0.086 . TGME49_260510 151 IVSNGGK|SV 0.146 . TGME49_260510 166 LAFLVNK|LN 0.061 . TGME49_260510 194 PMAEAPR|TP 0.089 . TGME49_260510 219 SQPLVGK|VE 0.054 . TGME49_260510 228 SLDCLCR|DF 0.102 . TGME49_260510 239 NPALCAK|AR 0.074 . TGME49_260510 241 ALCAKAR|TF 0.132 . TGME49_260510 245 KARTFVK|EQ 0.066 . TGME49_260510 250 VKEQQQR|RD 0.075 . TGME49_260510 251 KEQQQRR|DA 0.304 . TGME49_260510 263 PSPTEDR|AQ 0.123 . TGME49_260510 272 GAEENER|EA 0.113 . TGME49_260510 292 EGTWTMR|RV 0.097 . TGME49_260510 293 GTWTMRR|VR 0.105 . TGME49_260510 295 WTMRRVR|KD 0.236 . TGME49_260510 296 TMRRVRK|DG 0.391 . TGME49_260510 303 DGCCFYR|AY 0.105 . TGME49_260510 315 VFLCFLR|QR 0.076 . TGME49_260510 317 LCFLRQR|EK 0.081 . TGME49_260510 319 FLRQREK|IK 0.062 . TGME49_260510 321 RQREKIK|SF 0.108 . TGME49_260510 325 KIKSFIK|RI 0.065 . TGME49_260510 326 IKSFIKR|IN 0.344 . TGME49_260510 334 NDELLPK|VQ 0.058 . TGME49_260510 358 TVENLEK|LE 0.069 . TGME49_260510 387 YIVVFAR|LL 0.079 . TGME49_260510 395 LASTHIK|LN 0.071 . TGME49_260510 457 PGEVPVR|HI 0.098 . TGME49_260510 473 QIHLIYR|PG 0.078 . TGME49_260510 485 FFFYSPR|QA 0.155 . ____________________________^_________________

  • Fasta :-

    >TGME49_260510 ATGACGGCACATATAAGCGCGGTTTCCTTCACTTTTTTCTGGTCCCTAAAAGATGAAAGG CCCGCCAAGAAACCGGGGAGAAAGCCTGGGGGTTCTAGTGGTAAACTGACTCTGATACAT ACGAAAACTGTATCCAGTGATTTCGTTGCACACCAAAAAAACCTCCAACATAAACGTGGG CAACAACGCCCGTATTCACTGCGGGTGCGACCTGTCGGTTTTTCCGTCTGGAACATCTTC GGCCGAGGGTCACCGGAGCTCCGCTGCGTTCTCGCCTCCTCATACGGGCACGAATTGTAT GCTGCGAAGTATCTCGAAATTTCGCGTGGCGGCCTCCTGCTTCGGCACTGGCGTCCATCT GCCGTTCACTTCCCTTTTTCTTCTCGTGGTGCTTTGCCTTGCCACCTTCCCTCCTTGCTT CTTCTGGCCGAAATCGTGTCTAACGGGGGAAAAAGCGTGTTTATCGAACAGTTTACTCTC GCCTTCCTTGTGAACAAATTGAACATGGCGGATTCAAACGGAGGGGTCGAACCTGTTGCA GACCCTAACACCTCTGCAGGGCCGATGGCAGAAGCACCACGGACACCTCAAGAGAATGAA GGGAATTCGTTGCCAGAATGGCAGCAGGAAATCGAGAGCCAGCCACTTGTAGGGAAAGTG GAGAGTCTGGACTGTTTGTGTCGGGATTTCGAAGGGAACCCTGCGCTCTGTGCCAAGGCG CGGACGTTCGTCAAGGAACAACAGCAGAGAAGGGATGCCTGCTGCAGCCCGAGTCCAACA GAAGACAGAGCTCAAGGCGCAGAAGAGAACGAGAGGGAAGCCGGACATTCTCACGAGGAT GCTCTGCACGGAGCTGAGGGCACATGGACCATGAGAAGAGTACGCAAGGACGGATGCTGC TTTTACCGCGCGTACATGTACGGCGTCTTCCTCTGCTTTCTCCGTCAACGCGAGAAAATC AAAAGCTTCATTAAACGCATCAACGACGAATTGCTGCCCAAAGTACAGGAAGTCAACGCT GGCGCAGAGACTGTGGCCGACTTCGCTGAAGAAACTGTGGAGAACCTGGAGAAGCTGGAA TCCCCTGAAGCCAACACGCAGACGCTCGACGACATCTTCAACGATACCTGCAGCAGCAAT TACATTGTTGTCTTTGCGCGCCTTCTCGCTTCGACACACATTAAGTTGAACAGTGAATTG TACTTGCCGTTCCTGACCGCGTACGCAACGGTGGAGGACTACTGCTCTCACGAAGTGGAT CCGATGTGGGTGGAAGCTGAGCAGCCTCAAATCATGGCGTTGACAGCGATGACACAGATG CCTGTAGAGATTGTCTATTTCGATCAGTCGCCCGGCGAGGTGCCAGTTCGTCATATTTTC CCGCACTCGGACGACGCCCAGATCCATTTGATTTATCGGCCGGGACACTACGACTTTTTC TTTTATTCCCCTCGACAGGCCGGTGCTCACCAGAGCACGTAGGATGCCGTCGAGTATCAA CACTGTTTCGAGCCACGCAGTGTGAAGGACGTGTAGACCTTGACTATGTGGACCAAAACG TCTTCACAATTGCATCACTTTTTGCAAAGTATGCTGCGCAGTGGCTTACGGTGGAAAGCG GAAGATGACATGCAGCCATGGTTGTCAGTGTCTCTACGTGCTAAATGCTAGTCTAAAACA ACAGCGTACTCGGTGCTCTCCAATGCATCAACTTATTATTTTCTAT
  • Download Fasta

  • Fasta :-

    MTAHISAVSFTFFWSLKDERPAKKPGRKPGGSSGKLTLIHTKTVSSDFVAHQKNLQHKRG QQRPYSLRVRPVGFSVWNIFGRGSPELRCVLASSYGHELYAAKYLEISRGGLLLRHWRPS AVHFPFSSRGALPCHLPSLLLLAEIVSNGGKSVFIEQFTLAFLVNKLNMADSNGGVEPVA DPNTSAGPMAEAPRTPQENEGNSLPEWQQEIESQPLVGKVESLDCLCRDFEGNPALCAKA RTFVKEQQQRRDACCSPSPTEDRAQGAEENEREAGHSHEDALHGAEGTWTMRRVRKDGCC FYRAYMYGVFLCFLRQREKIKSFIKRINDELLPKVQEVNAGAETVADFAEETVENLEKLE SPEANTQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSELYLPFLTAYATVEDYCSHEVD PMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEVPVRHIFPHSDDAQIHLIYRPGHYDFF FYSPRQAGAHQST

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_260510277 SEAGHSHEDA0.998unspTGME49_260510277 SEAGHSHEDA0.998unspTGME49_260510277 SEAGHSHEDA0.998unspTGME49_260510361 SEKLESPEAN0.991unspTGME49_26051084 SFGRGSPELR0.991unspTGME49_260510258 SCCSPSPTED0.993unsp

TGME49_060510      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India