TGME49_261500 | hydrolase

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_IDPredictionOTHERSPmTPCS_Position
TGME49_261500OTHER0.9962380.0035790.000183
No Results

  • Fasta :-

    >TGME49_261500 MGISSSNLGDAILFPAPASSYATQLPGLLWIEEDFKPKVPRGSLSAEAVAEQEAVHRQER AKQRLFPAFFIEAPGGESQCTILYWHGNSCDLGQIYEEMDVLSKFLNAHVLAIEFPGYGL APPLNGPGPEDLAAAAIRAESSGEAAPRRTTSGLAKNQMGELINKWSRSAFNFLIWLGVA PASVICFGRSIGTGPASYLAAALAEENVHIGGVVLHAPYITVHKIVQEYASLGTWLISNH WSNAANLEKMGAASCPLLIVHGLDDEVIPTSHGRRLFEAYKSEKKEGFFPADSSHNSYYI IDDLGKPMETFLQDKSLAANAPAVRVSIPAYVREAPVWQLQTLEASGASPAAEAASATSA ASAALSSLPSSPVSPERLAEAKEALEDSQSPATEAVVEASRGGPAVVAATTHAVDRSNSA LGNLIATATGSKGGQRDVALTHGQRERDENAQKDSEDGLAASRRFSHILESGLFSKGSLD EIRGEALREVTRDGTENAHTS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_261500.fa Sequence name : TGME49_261500 Sequence length : 501 VALUES OF COMPUTED PARAMETERS Coef20 : 3.849 CoefTot : -0.459 ChDiff : -19 ZoneTo : 31 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.871 1.900 0.293 0.752 MesoH : 0.421 0.766 -0.140 0.421 MuHd_075 : 17.292 17.987 5.408 5.110 MuHd_095 : 15.063 14.303 4.542 4.041 MuHd_100 : 19.966 13.828 6.156 3.144 MuHd_105 : 21.341 16.174 7.251 4.525 Hmax_075 : 14.700 13.417 2.683 5.063 Hmax_095 : 11.462 14.788 2.001 5.775 Hmax_100 : 11.100 11.300 1.825 4.300 Hmax_105 : 12.250 14.117 2.268 5.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9440 0.0560 DFMC : 0.9513 0.0487
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 501 TGME49_261500 MGISSSNLGDAILFPAPASSYATQLPGLLWIEEDFKPKVPRGSLSAEAVAEQEAVHRQERAKQRLFPAFFIEAPGGESQC 80 TILYWHGNSCDLGQIYEEMDVLSKFLNAHVLAIEFPGYGLAPPLNGPGPEDLAAAAIRAESSGEAAPRRTTSGLAKNQMG 160 ELINKWSRSAFNFLIWLGVAPASVICFGRSIGTGPASYLAAALAEENVHIGGVVLHAPYITVHKIVQEYASLGTWLISNH 240 WSNAANLEKMGAASCPLLIVHGLDDEVIPTSHGRRLFEAYKSEKKEGFFPADSSHNSYYIIDDLGKPMETFLQDKSLAAN 320 APAVRVSIPAYVREAPVWQLQTLEASGASPAAEAASATSAASAALSSLPSSPVSPERLAEAKEALEDSQSPATEAVVEAS 400 RGGPAVVAATTHAVDRSNSALGNLIATATGSKGGQRDVALTHGQRERDENAQKDSEDGLAASRRFSHILESGLFSKGSLD 480 EIRGEALREVTRDGTENAHTS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_261500 36 WIEEDFK|PK 0.057 . TGME49_261500 38 EEDFKPK|VP 0.064 . TGME49_261500 41 FKPKVPR|GS 0.120 . TGME49_261500 57 EQEAVHR|QE 0.093 . TGME49_261500 60 AVHRQER|AK 0.273 . TGME49_261500 62 HRQERAK|QR 0.062 . TGME49_261500 64 QERAKQR|LF 0.101 . TGME49_261500 104 EMDVLSK|FL 0.062 . TGME49_261500 138 LAAAAIR|AE 0.140 . TGME49_261500 148 SGEAAPR|RT 0.100 . TGME49_261500 149 GEAAPRR|TT 0.176 . TGME49_261500 156 TTSGLAK|NQ 0.078 . TGME49_261500 165 MGELINK|WS 0.063 . TGME49_261500 168 LINKWSR|SA 0.177 . TGME49_261500 189 SVICFGR|SI 0.306 . TGME49_261500 224 PYITVHK|IV 0.067 . TGME49_261500 249 NAANLEK|MG 0.063 . TGME49_261500 274 IPTSHGR|RL 0.108 . TGME49_261500 275 PTSHGRR|LF 0.159 . TGME49_261500 281 RLFEAYK|SE 0.076 . TGME49_261500 284 EAYKSEK|KE 0.062 . TGME49_261500 285 AYKSEKK|EG 0.069 . TGME49_261500 306 IIDDLGK|PM 0.064 . TGME49_261500 315 ETFLQDK|SL 0.077 . TGME49_261500 325 ANAPAVR|VS 0.081 . TGME49_261500 333 SIPAYVR|EA 0.081 . TGME49_261500 377 SPVSPER|LA 0.174 . TGME49_261500 382 ERLAEAK|EA 0.066 . TGME49_261500 401 AVVEASR|GG 0.077 . TGME49_261500 416 TTHAVDR|SN 0.214 . TGME49_261500 432 ATATGSK|GG 0.056 . TGME49_261500 436 GSKGGQR|DV 0.136 . TGME49_261500 445 ALTHGQR|ER 0.065 . TGME49_261500 447 THGQRER|DE 0.137 . TGME49_261500 453 RDENAQK|DS 0.103 . TGME49_261500 463 DGLAASR|RF 0.083 . TGME49_261500 464 GLAASRR|FS 0.310 . TGME49_261500 476 ESGLFSK|GS 0.073 . TGME49_261500 483 GSLDEIR|GE 0.088 . TGME49_261500 488 IRGEALR|EV 0.116 . TGME49_261500 492 ALREVTR|DG 0.106 . ____________________________^_________________

  • Fasta :-

    >TGME49_261500 ATGGGCATTTCATCGAGCAATCTGGGGGATGCGATCCTCTTCCCTGCTCCGGCTTCTTCG TACGCCACTCAGCTTCCCGGCCTGCTGTGGATCGAAGAAGATTTCAAGCCCAAGGTTCCC CGCGGGAGTCTCTCTGCGGAGGCGGTGGCGGAGCAAGAAGCCGTCCACCGGCAAGAACGC GCGAAGCAGAGACTGTTCCCCGCCTTCTTCATCGAGGCTCCTGGCGGGGAGAGTCAGTGC ACCATCCTCTACTGGCATGGCAACTCTTGCGACCTTGGACAGATCTACGAAGAGATGGAT GTCCTCTCGAAGTTTCTCAACGCCCATGTGCTCGCAATCGAGTTTCCAGGCTACGGTCTG GCGCCTCCTCTGAATGGACCTGGACCTGAAGACCTCGCGGCGGCGGCCATCCGCGCAGAG AGTTCTGGCGAGGCTGCGCCCCGGCGCACAACTTCTGGACTCGCGAAAAATCAGATGGGG GAATTAATCAACAAGTGGAGTCGCTCGGCCTTCAACTTCCTCATCTGGTTGGGCGTCGCC CCCGCCAGTGTGATCTGCTTTGGCCGAAGCATCGGAACGGGCCCAGCGAGCTACTTGGCG GCGGCCTTGGCCGAGGAGAATGTTCACATTGGAGGCGTCGTTCTGCATGCGCCCTACATC ACTGTGCACAAGATCGTACAAGAATATGCTTCTCTCGGGACCTGGTTGATTTCAAATCAC TGGAGCAACGCAGCGAACCTGGAGAAAATGGGGGCAGCCTCCTGTCCTCTTCTGATCGTC CACGGACTGGACGACGAGGTCATCCCCACCAGCCACGGCCGGAGACTCTTCGAAGCTTAC AAATCCGAGAAAAAAGAGGGATTCTTCCCTGCAGACTCCTCCCACAACAGCTACTACATC ATCGATGACCTAGGCAAGCCGATGGAGACGTTTCTGCAAGACAAGAGTTTGGCCGCGAAT GCGCCTGCAGTGCGGGTCTCGATTCCTGCGTACGTGAGGGAGGCGCCGGTGTGGCAGCTC CAGACCCTTGAGGCTTCGGGGGCTTCGCCGGCCGCGGAAGCAGCTTCAGCGACTTCTGCA GCAAGTGCAGCTCTCTCGAGTTTGCCCTCTTCTCCCGTCTCTCCAGAGAGACTGGCAGAG GCGAAGGAAGCGCTCGAAGACTCTCAGTCGCCTGCGACAGAGGCGGTCGTTGAGGCCTCT CGCGGAGGCCCCGCGGTCGTGGCGGCGACGACGCATGCGGTCGACCGGAGCAACTCTGCT CTCGGAAACTTAATTGCCACAGCGACAGGGTCCAAGGGAGGCCAGCGAGACGTCGCACTC ACACATGGTCAGAGAGAACGCGACGAGAACGCGCAGAAGGACTCTGAAGACGGCCTCGCC GCGTCCAGGCGTTTCTCGCACATACTCGAAAGCGGACTCTTCTCTAAAGGCTCTCTCGAT GAAATCAGGGGTGAAGCGCTACGCGAGGTCACCCGAGACGGAACAGAAAACGCCCACACT TCATAAGAAGAAAGTTACGCATCGACAGAGAGACAGCGCACGCGTGGAAAAGGGGGCAAA CAGTTGCTGACCTCGATACATACATATATACAAATATATATATATATATATATGTATATA GATACATAGATACATAGATACATGCACATATACAAGTATATATATGTGTGTATGTGTTTA GAGAAAGAGAAAGAGAGGTCAACAGGT
  • Download Fasta

  • Fasta :-

    MGISSSNLGDAILFPAPASSYATQLPGLLWIEEDFKPKVPRGSLSAEAVAEQEAVHRQER AKQRLFPAFFIEAPGGESQCTILYWHGNSCDLGQIYEEMDVLSKFLNAHVLAIEFPGYGL APPLNGPGPEDLAAAAIRAESSGEAAPRRTTSGLAKNQMGELINKWSRSAFNFLIWLGVA PASVICFGRSIGTGPASYLAAALAEENVHIGGVVLHAPYITVHKIVQEYASLGTWLISNH WSNAANLEKMGAASCPLLIVHGLDDEVIPTSHGRRLFEAYKSEKKEGFFPADSSHNSYYI IDDLGKPMETFLQDKSLAANAPAVRVSIPAYVREAPVWQLQTLEASGASPAAEAASATSA ASAALSSLPSSPVSPERLAEAKEALEDSQSPATEAVVEASRGGPAVVAATTHAVDRSNSA LGNLIATATGSKGGQRDVALTHGQRERDENAQKDSEDGLAASRRFSHILESGLFSKGSLD EIRGEALREVTRDGTENAHTS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_261500374 SSSPVSPERL0.998unspTGME49_261500374 SSSPVSPERL0.998unspTGME49_261500374 SSSPVSPERL0.998unspTGME49_261500466 SSRRFSHILE0.995unspTGME49_261500141 SIRAESSGEA0.996unspTGME49_261500371 SSLPSSPVSP0.994unsp

TGME49_061500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India