TGME49_266140 | peptidase, M50 family protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_266140OTHER0.9997000.0000380.000262
No Results

  • Fasta :-

    >TGME49_266140 MSGAVRIDARGMIIREGEDPELGRPLRSAAESHATDLRASGRTLEQRQVSTRSSQPRGSI LGCLRRTFVRPFCCFPDAAGARPEGAYTGFWLPPILGLAPIFWLTIFAAIGCGILAQFYW QPLLLTGLVVLGYILSVALHEFAHAATAFKGGDESVVYSGYLTLDYLRYTSPLFSLGLPL LFLLLGNVALPGAAVLIQHENLRGAQWRTLTALAGPLATFLSGLLFSGLLHLSLLSADYY YTILHMGLACLIYFEAMSFIINMIPLPPLDGWAALEPWLPHSCFLKKAMDDPTLQRIVPL LVLAALFPVFARVPFFGHAVNVVAVTIFRAPPDLTPLAMQYFAVPYSQWRYMHPIPVPVD MRRASVSSSEFLEDFLLQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_266140.fa Sequence name : TGME49_266140 Sequence length : 378 VALUES OF COMPUTED PARAMETERS Coef20 : 3.630 CoefTot : 0.138 ChDiff : 0 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.229 2.465 0.441 0.882 MesoH : 1.199 1.229 0.096 0.603 MuHd_075 : 23.546 12.222 5.322 7.172 MuHd_095 : 18.022 9.367 2.805 3.556 MuHd_100 : 5.824 2.166 1.385 0.673 MuHd_105 : 8.494 5.961 3.456 3.093 Hmax_075 : 4.433 15.517 0.881 5.133 Hmax_095 : 6.562 8.400 -0.149 3.465 Hmax_100 : 6.500 10.000 -0.330 3.480 Hmax_105 : 5.000 9.567 0.565 4.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7231 0.2769 DFMC : 0.8552 0.1448
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 378 TGME49_266140 MSGAVRIDARGMIIREGEDPELGRPLRSAAESHATDLRASGRTLEQRQVSTRSSQPRGSILGCLRRTFVRPFCCFPDAAG 80 ARPEGAYTGFWLPPILGLAPIFWLTIFAAIGCGILAQFYWQPLLLTGLVVLGYILSVALHEFAHAATAFKGGDESVVYSG 160 YLTLDYLRYTSPLFSLGLPLLFLLLGNVALPGAAVLIQHENLRGAQWRTLTALAGPLATFLSGLLFSGLLHLSLLSADYY 240 YTILHMGLACLIYFEAMSFIINMIPLPPLDGWAALEPWLPHSCFLKKAMDDPTLQRIVPLLVLAALFPVFARVPFFGHAV 320 NVVAVTIFRAPPDLTPLAMQYFAVPYSQWRYMHPIPVPVDMRRASVSSSEFLEDFLLQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_266140 6 -MSGAVR|ID 0.084 . TGME49_266140 10 AVRIDAR|GM 0.101 . TGME49_266140 15 ARGMIIR|EG 0.115 . TGME49_266140 24 EDPELGR|PL 0.084 . TGME49_266140 27 ELGRPLR|SA 0.496 . TGME49_266140 38 SHATDLR|AS 0.110 . TGME49_266140 42 DLRASGR|TL 0.123 . TGME49_266140 47 GRTLEQR|QV 0.144 . TGME49_266140 52 QRQVSTR|SS 0.192 . TGME49_266140 57 TRSSQPR|GS 0.165 . TGME49_266140 65 SILGCLR|RT 0.071 . TGME49_266140 66 ILGCLRR|TF 0.102 . TGME49_266140 70 LRRTFVR|PF 0.103 . TGME49_266140 82 PDAAGAR|PE 0.110 . TGME49_266140 150 HAATAFK|GG 0.070 . TGME49_266140 168 LTLDYLR|YT 0.083 . TGME49_266140 203 IQHENLR|GA 0.108 . TGME49_266140 208 LRGAQWR|TL 0.131 . TGME49_266140 286 PHSCFLK|KA 0.080 . TGME49_266140 287 HSCFLKK|AM 0.115 . TGME49_266140 296 DDPTLQR|IV 0.078 . TGME49_266140 312 LFPVFAR|VP 0.079 . TGME49_266140 329 VAVTIFR|AP 0.072 . TGME49_266140 350 VPYSQWR|YM 0.112 . TGME49_266140 362 PVPVDMR|RA 0.086 . TGME49_266140 363 VPVDMRR|AS 0.120 . ____________________________^_________________

  • Fasta :-

    >TGME49_266140 GTTCGAAATGATGCCGTGAAAATTCATGCCAGGCATGCACCCCACCTTCCAAGCTACCTT CATCATCTCACGGCCACACAAAGTGCTTTGCTCGCTAGTAATGCACACTTGGCTGAAGTG GAATGCCCCGCGCATGTCTCAAGCGAGTCATTAGCGGTCGGACGAGAGAAAGCCATGAGA AAACGAGTCGGATGGAAAACCTTTTCACTTCCCCGAGTATGAGCGAGTCTGAGCAGAAGT TCTACCGCTTTAAAATGTTTTTTGTCTGACCGTTTGTCTTTCCTTGTTTCTGATCCTGTG CCAGCGCGGCCGTGTTGCGTAACTTCGCTACCGCAGTCCAGCCAACTCGGCATGCAATTT TCTTCGTCGAAGAATGCGAACTACATTTGCGCGCGTGTCTCGTGTTTGTCTGCGACAAGG TACTTGAGTTCTTCTACTGCTTGACATTTGCAGTCCGCGTTCAAGTGTAGGTCCTTTGCG GGCCACCGACTCTTTCGCTGGACTGGTGCCCGCCTATTCTCGGGGAGAGTTCACTGCCGT ACACGAATCATACGAATTAACATTAGAACGACCCTATGGTGTCGGAACGCTGTCCGTTTC TCGCAATTTCTAGTCTGTAACGGGGCCACTCATGCGTCGCGGTCTCTACTGAACGAACTG GCAGACGGGCAGCGGAGTGTGGATCAGCGTCCGCCGTTTTCCGCGTCCTTTGCTAATCTT TGAGAAAGATTTTTTTTTCTCTGAATAGGCAGACCCCCGCAGCCTGTTTGTTGCGTGACT CGTGTGGAGCCAAGCCTAACAGTCCGTGCGGAGATAAAATTGCAAGGAGCGACGGGGCCA CCGCAAAGGGAATCTAAAGAGCGGATCCAGGTTCTGTCCTAATCTTTCAACGATGAGTCG CCGCGGCTTCTGTTTTCCACGACACTCACGCAATAAACAAAGTTAAGCTGGACAGTTCCG AAACCAAAGCTGTCTGTCCCGCGAGGCTCGCAGCAGCGAACCCTTCAGTCACAAACCACA TTGGTTTGCCAGCAAGTCAACCGTCGAAAAAATGTCGGGCGCTGTGCGTATCGACGCGCG AGGGATGATCATTCGGGAAGGAGAAGATCCTGAACTCGGACGACCTCTGCGCTCTGCTGC TGAGTCGCACGCAACCGATTTGCGAGCCTCTGGAAGGACGCTAGAACAAAGGCAGGTTTC GACGAGGTCGTCGCAACCAAGGGGCAGCATTCTCGGCTGTCTCCGCCGAACTTTTGTCAG ACCTTTCTGTTGCTTTCCCGACGCTGCAGGTGCCCGCCCAGAGGGTGCATACACCGGGTT CTGGCTGCCACCCATCCTCGGGCTCGCCCCCATTTTCTGGCTCACCATTTTCGCGGCAAT AGGATGCGGAATTCTTGCACAGTTCTACTGGCAACCGCTTCTCCTTACCGGTCTTGTCGT TCTTGGGTACATTCTCTCCGTCGCTCTCCACGAGTTCGCGCATGCGGCAACTGCATTCAA GGGCGGGGACGAGTCTGTCGTCTACTCAGGCTACCTCACCCTCGATTACTTGAGATACAC CTCGCCTCTCTTCTCCTTGGGTCTTCCTCTTCTCTTTCTTCTCCTAGGCAATGTCGCACT TCCAGGTGCAGCAGTATTGATTCAGCATGAGAACCTCCGAGGAGCCCAGTGGAGGACGCT TACAGCGCTGGCGGGGCCGCTCGCAACCTTCCTTTCTGGCCTTCTTTTCTCGGGTCTTCT CCATCTAAGTCTCCTCAGCGCCGATTACTACTACACGATTCTCCACATGGGCTTGGCATG TCTGATATACTTCGAGGCGATGAGCTTCATCATCAACATGATTCCTCTACCTCCTCTCGA CGGCTGGGCGGCGCTAGAGCCGTGGCTCCCGCATTCGTGCTTCCTCAAGAAGGCCATGGA CGACCCGACTTTGCAGCGCATTGTTCCTCTCTTGGTTCTTGCTGCGCTCTTTCCTGTCTT CGCGAGGGTGCCTTTCTTCGGCCACGCCGTGAACGTGGTGGCTGTCACTATTTTTCGAGC TCCGCCAGATTTGACGCCTTTGGCGATGCAGTACTTTGCCGTCCCGTACAGTCAGTGGCG ATACATGCACCCAATTCCCGTCCCAGTGGACATGCGGCGTGCTTCCGTCTCGTCCTCGGA GTTTTTGGAGGATTTTCTGCTGCAGTGAAAGGCCAAAATCCTTTTCTGTCGGTGACAAAG TGCCTGAAGTAGCAGTTAAGTGTAGGAGACTCGCACAGGATCCGCACATCCCAACGGTAA ACAGCGTTCACCCAGTTCCCTGGTGGAGCACCATGCAAAGGATGTACTCATTGTGTTAAT CAGACCGAGGGAGGCTCTGAGGGGTAAAAGCCGCGCGTGAATCTTAGTCACCCACACGAC TGTGGAGCTGGTTTTTTGCGCGCTGACGCCGAGTTTGGAAGAAAGAGTTGCCATGAGTCT CGCTGTCTCTTCTGCAGCGGAAACTGTTGGCGCGACACCGTGTGCGGAGACCAGGGATGC CCTAATGCACCTTGTTTCCTAGTACCTAGCTTACCACTCATGTAAACCGTTGTGGTTTTT TGAGCATGCACCAGTATTCATTTTGGTGTTACGACTTTCGGCACTAAGACACCCTAGAAC TCACACACCGAAGGTTTCGAAGCCGTACCGATCTGGATCGCAGATCGTGTGCACAATTCA ATGCTGTCTCAGTGATGATCGTCGCCAGTATTACCATCCGTTTTCAAGACGCTGTCCGTT ATACACAAGCAACTAGGATTAAGTCGGA
  • Download Fasta

  • Fasta :-

    MSGAVRIDARGMIIREGEDPELGRPLRSAAESHATDLRASGRTLEQRQVSTRSSQPRGSI LGCLRRTFVRPFCCFPDAAGARPEGAYTGFWLPPILGLAPIFWLTIFAAIGCGILAQFYW QPLLLTGLVVLGYILSVALHEFAHAATAFKGGDESVVYSGYLTLDYLRYTSPLFSLGLPL LFLLLGNVALPGAAVLIQHENLRGAQWRTLTALAGPLATFLSGLLFSGLLHLSLLSADYY YTILHMGLACLIYFEAMSFIINMIPLPPLDGWAALEPWLPHSCFLKKAMDDPTLQRIVPL LVLAALFPVFARVPFFGHAVNVVAVTIFRAPPDLTPLAMQYFAVPYSQWRYMHPIPVPVD MRRASVSSSEFLEDFLLQ

    No Results
  • title: active site
  • coordinates: H140,E141,H144,N262,D270
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_26614054 SSTRSSQPRG0.99unspTGME49_26614054 SSTRSSQPRG0.99unspTGME49_26614054 SSTRSSQPRG0.99unspTGME49_266140365 SMRRASVSSS0.998unspTGME49_26614040 SDLRASGRTL0.996unspTGME49_26614050 SQRQVSTRSS0.996unsp

TGME49_066140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India