TGME49_271070 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
TGME49_271070SP0.3264690.6588580.014673CS pos: 31-32. CAA-LQ. Pr: 0.9237
No Results

  • Fasta :-

    >TGME49_271070 MAGVPEPRILCDTMRYLVTVLAIFFFQKCAALQPHLPPQSLRLFVGHALMPQMFQWQPET YGWKSSPRKTVRGPHKQNRVFFSGSSSEFDTLQMVRQYSSRDYVSNAVLRRLSRSSQGDT DLDESDNSLLPGCLEVRDMPYCVKAREVPGDGACLFVSVAASLWWNAFETHADLNDPAFV DMVGSLRQLAVDTLQDTNATPLALEGDEVLSRRTLVTMAAADYNMTPAAYCERMRLPGTW GGGPEIVAMSHALRRVIVVYEKHSPSMQSGDSQSGSAFDTHPHRLSRPPATDSPSDSGQN PIKLKVVACLGFPENVAEEPLHILFTSSAGDGQAADHFLPLFPVVSQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_271070.fa Sequence name : TGME49_271070 Sequence length : 347 VALUES OF COMPUTED PARAMETERS Coef20 : 4.075 CoefTot : -0.362 ChDiff : -7 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.635 1.835 0.170 0.619 MesoH : -0.512 0.315 -0.372 0.205 MuHd_075 : 15.552 12.895 3.414 2.672 MuHd_095 : 28.374 14.876 5.241 6.721 MuHd_100 : 28.470 13.936 6.172 6.381 MuHd_105 : 31.401 15.694 7.042 6.152 Hmax_075 : 16.683 19.833 3.174 6.370 Hmax_095 : 8.138 13.825 0.717 4.524 Hmax_100 : 14.400 14.600 3.716 4.830 Hmax_105 : 16.600 18.800 4.179 5.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8569 0.1431 DFMC : 0.8944 0.1056
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 347 TGME49_271070 MAGVPEPRILCDTMRYLVTVLAIFFFQKCAALQPHLPPQSLRLFVGHALMPQMFQWQPETYGWKSSPRKTVRGPHKQNRV 80 FFSGSSSEFDTLQMVRQYSSRDYVSNAVLRRLSRSSQGDTDLDESDNSLLPGCLEVRDMPYCVKAREVPGDGACLFVSVA 160 ASLWWNAFETHADLNDPAFVDMVGSLRQLAVDTLQDTNATPLALEGDEVLSRRTLVTMAAADYNMTPAAYCERMRLPGTW 240 GGGPEIVAMSHALRRVIVVYEKHSPSMQSGDSQSGSAFDTHPHRLSRPPATDSPSDSGQNPIKLKVVACLGFPENVAEEP 320 LHILFTSSAGDGQAADHFLPLFPVVSQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_271070 8 AGVPEPR|IL 0.095 . TGME49_271070 15 ILCDTMR|YL 0.127 . TGME49_271070 28 AIFFFQK|CA 0.069 . TGME49_271070 42 LPPQSLR|LF 0.085 . TGME49_271070 64 PETYGWK|SS 0.065 . TGME49_271070 68 GWKSSPR|KT 0.106 . TGME49_271070 69 WKSSPRK|TV 0.130 . TGME49_271070 72 SPRKTVR|GP 0.173 . TGME49_271070 76 TVRGPHK|QN 0.077 . TGME49_271070 79 GPHKQNR|VF 0.138 . TGME49_271070 96 DTLQMVR|QY 0.072 . TGME49_271070 101 VRQYSSR|DY 0.114 . TGME49_271070 110 VSNAVLR|RL 0.095 . TGME49_271070 111 SNAVLRR|LS 0.184 . TGME49_271070 114 VLRRLSR|SS 0.310 . TGME49_271070 137 PGCLEVR|DM 0.081 . TGME49_271070 144 DMPYCVK|AR 0.060 . TGME49_271070 146 PYCVKAR|EV 0.138 . TGME49_271070 187 DMVGSLR|QL 0.073 . TGME49_271070 212 GDEVLSR|RT 0.072 . TGME49_271070 213 DEVLSRR|TL 0.109 . TGME49_271070 233 PAAYCER|MR 0.084 . TGME49_271070 235 AYCERMR|LP 0.096 . TGME49_271070 254 AMSHALR|RV 0.133 . TGME49_271070 255 MSHALRR|VI 0.200 . TGME49_271070 262 VIVVYEK|HS 0.058 . TGME49_271070 284 FDTHPHR|LS 0.075 . TGME49_271070 287 HPHRLSR|PP 0.207 . TGME49_271070 303 SGQNPIK|LK 0.063 . TGME49_271070 305 QNPIKLK|VV 0.071 . ____________________________^_________________

  • Fasta :-

    >TGME49_271070 ATGGCTGGAGTTCCCGAACCTAGGATTCTCTGCGACACGATGAGATATCTTGTCACTGTC TTGGCGATTTTCTTCTTCCAAAAGTGTGCAGCTCTGCAGCCTCATCTTCCACCTCAGAGC CTGCGACTCTTCGTCGGACACGCTCTTATGCCACAGATGTTTCAATGGCAGCCTGAAACC TATGGATGGAAATCCTCCCCTAGAAAAACCGTCCGTGGACCGCATAAACAGAACAGGGTA TTTTTTTCAGGCTCGTCCTCCGAGTTCGATACCTTGCAGATGGTCCGCCAGTACAGTTCT CGAGATTACGTGTCCAATGCTGTCTTGCGGAGGCTTTCCCGTAGCAGCCAAGGTGATACC GATTTGGATGAGTCTGACAACAGTCTCCTACCTGGATGCTTGGAAGTTCGGGACATGCCC TACTGCGTGAAAGCTAGAGAGGTACCCGGCGATGGCGCCTGCCTCTTCGTGTCAGTGGCT GCAAGCTTGTGGTGGAACGCCTTCGAGACGCATGCAGACCTTAATGATCCTGCATTCGTG GACATGGTCGGCTCTCTTCGACAGCTGGCGGTCGACACGCTGCAGGACACAAATGCTACA CCGCTTGCCCTAGAAGGCGACGAGGTGTTGTCACGGCGCACTCTTGTCACTATGGCTGCG GCGGATTACAATATGACTCCCGCTGCGTACTGTGAGAGAATGCGCCTGCCGGGCACTTGG GGTGGAGGCCCGGAGATCGTTGCTATGAGCCATGCACTCCGACGAGTTATCGTTGTCTAT GAGAAGCACAGTCCGAGTATGCAGAGCGGAGACTCTCAAAGCGGCTCCGCTTTTGACACC CACCCCCACCGTCTTAGTCGTCCTCCCGCGACCGATAGTCCTTCCGACAGCGGACAGAAC CCAATTAAATTAAAGGTGGTTGCTTGTTTGGGGTTTCCAGAAAACGTTGCGGAAGAACCC CTTCATATTCTGTTTACCAGCTCTGCGGGAGATGGCCAAGCAGCGGATCATTTTCTCCCT CTGTTCCCTGTTGTGTCACAGTAA
  • Download Fasta

  • Fasta :-

    MAGVPEPRILCDTMRYLVTVLAIFFFQKCAALQPHLPPQSLRLFVGHALMPQMFQWQPET YGWKSSPRKTVRGPHKQNRVFFSGSSSEFDTLQMVRQYSSRDYVSNAVLRRLSRSSQGDT DLDESDNSLLPGCLEVRDMPYCVKAREVPGDGACLFVSVAASLWWNAFETHADLNDPAFV DMVGSLRQLAVDTLQDTNATPLALEGDEVLSRRTLVTMAAADYNMTPAAYCERMRLPGTW GGGPEIVAMSHALRRVIVVYEKHSPSMQSGDSQSGSAFDTHPHRLSRPPATDSPSDSGQN PIKLKVVACLGFPENVAEEPLHILFTSSAGDGQAADHFLPLFPVVSQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_271070113 SLRRLSRSSQ0.995unspTGME49_271070113 SLRRLSRSSQ0.995unspTGME49_271070113 SLRRLSRSSQ0.995unspTGME49_271070116 SLSRSSQGDT0.998unspTGME49_271070264 SYEKHSPSMQ0.993unspTGME49_271070272 SQSGDSQSGS0.991unspTGME49_271070293 SPATDSPSDS0.996unspTGME49_27107087 SSGSSSEFDT0.996unspTGME49_27107099 SVRQYSSRDY0.997unsp

TGME49_071070      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India