TGME49_272420 | phosphatidylcholine-sterol O-acyltransferase, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_272420OTHER0.5821350.4170590.000806
No Results

  • Fasta :-

    >TGME49_272420 MDFLSGGRKGRVCAKRFRLSPILWFASALVLIPLGCSPFKTDVALSSPFSPYRPSIHSAS TSASAQEPPASVHPTPSAVPSDPQVASRVGPHGATKSGFSRATRENVPAFPSRDPSFSTS VPSSTVSETDSGIFVVSSQDPVANQDHGISSVPSTASEPDSGVDHALFVIPGIAGSGLFA TVTNASVASCGKSPISYPNPFRVWASLSLLLPPATHQKCWIDMMKMVVDENGEVYTGQEG VRVEVDGYGGIHAIDYLDYYMNNTYGVPASAYMHVMLRTLMSLHYSQFVTLRGVPYDWRL PPWQLDYAQLKTDIEDRYTEMNNRKVDLIAHSLGSIILCYFLNRIVDQAWKDKYIGSMTI VAAATGGSFKAIKSLLSGYDDATDVDIWNVIDISLFPAGLLRDLLQTMGSIFALLPDPAI YGPDHVVARVARPTQVPASSSASAFAPLTGRSDRAAKKAEGTTPTALRWSHSGEMRRLDA VLTDEVGGPESGARELKSEQAFSLLSELAKDNVEVEKEEAEGETNTRFHKYPDFAPGDQM EEEELAKAEERRDALLREFQLQNRLSHEDRAARQRERYSLFVEKEQRRLEEALRVAQEQR LEEDVYTLSNWTSLLPANLQRRVKTAQEKMAGVVADPGVPVRCIWSKFSQPTTDVAYYYP TGSLDTHPIRIFDYGDNTVPLASLSLCASWPSTVQTKVFDNLDHMFLFADRGFNNFIFDI FSPDANPFLSSLLGEQEEVMKRDIPSPQESVPAGRGAIMADST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_272420.fa Sequence name : TGME49_272420 Sequence length : 763 VALUES OF COMPUTED PARAMETERS Coef20 : 4.477 CoefTot : -1.980 ChDiff : -22 ZoneTo : 104 KR : 12 DE : 4 CleavSite : 106 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.988 1.912 0.360 0.765 MesoH : 0.318 0.678 -0.153 0.348 MuHd_075 : 31.861 22.399 9.582 8.043 MuHd_095 : 29.367 18.248 9.094 6.500 MuHd_100 : 33.786 20.891 8.420 6.848 MuHd_105 : 42.229 21.633 11.273 9.013 Hmax_075 : 14.817 14.233 2.865 5.810 Hmax_095 : 9.362 7.700 2.177 3.500 Hmax_100 : 14.000 12.000 3.407 4.750 Hmax_105 : 16.100 14.400 3.788 5.927 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5561 0.4439 DFMC : 0.3648 0.6352 This protein is probably imported in mitochondria. f(Ser) = 0.1731 f(Arg) = 0.0769 CMi = 0.97403 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 763 TGME49_272420 MDFLSGGRKGRVCAKRFRLSPILWFASALVLIPLGCSPFKTDVALSSPFSPYRPSIHSASTSASAQEPPASVHPTPSAVP 80 SDPQVASRVGPHGATKSGFSRATRENVPAFPSRDPSFSTSVPSSTVSETDSGIFVVSSQDPVANQDHGISSVPSTASEPD 160 SGVDHALFVIPGIAGSGLFATVTNASVASCGKSPISYPNPFRVWASLSLLLPPATHQKCWIDMMKMVVDENGEVYTGQEG 240 VRVEVDGYGGIHAIDYLDYYMNNTYGVPASAYMHVMLRTLMSLHYSQFVTLRGVPYDWRLPPWQLDYAQLKTDIEDRYTE 320 MNNRKVDLIAHSLGSIILCYFLNRIVDQAWKDKYIGSMTIVAAATGGSFKAIKSLLSGYDDATDVDIWNVIDISLFPAGL 400 LRDLLQTMGSIFALLPDPAIYGPDHVVARVARPTQVPASSSASAFAPLTGRSDRAAKKAEGTTPTALRWSHSGEMRRLDA 480 VLTDEVGGPESGARELKSEQAFSLLSELAKDNVEVEKEEAEGETNTRFHKYPDFAPGDQMEEEELAKAEERRDALLREFQ 560 LQNRLSHEDRAARQRERYSLFVEKEQRRLEEALRVAQEQRLEEDVYTLSNWTSLLPANLQRRVKTAQEKMAGVVADPGVP 640 VRCIWSKFSQPTTDVAYYYPTGSLDTHPIRIFDYGDNTVPLASLSLCASWPSTVQTKVFDNLDHMFLFADRGFNNFIFDI 720 FSPDANPFLSSLLGEQEEVMKRDIPSPQESVPAGRGAIMADST 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .....................................................P.......................... 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_272420 8 DFLSGGR|KG 0.060 . TGME49_272420 9 FLSGGRK|GR 0.073 . TGME49_272420 11 SGGRKGR|VC 0.265 . TGME49_272420 15 KGRVCAK|RF 0.063 . TGME49_272420 16 GRVCAKR|FR 0.208 . TGME49_272420 18 VCAKRFR|LS 0.078 . TGME49_272420 40 LGCSPFK|TD 0.056 . TGME49_272420 53 SPFSPYR|PS 0.104 . TGME49_272420 88 DPQVASR|VG 0.085 . TGME49_272420 96 GPHGATK|SG 0.076 . TGME49_272420 101 TKSGFSR|AT 0.160 . TGME49_272420 104 GFSRATR|EN 0.329 . TGME49_272420 113 VPAFPSR|DP 0.130 . TGME49_272420 192 SVASCGK|SP 0.071 . TGME49_272420 202 SYPNPFR|VW 0.068 . TGME49_272420 218 PPATHQK|CW 0.086 . TGME49_272420 225 CWIDMMK|MV 0.082 . TGME49_272420 242 TGQEGVR|VE 0.083 . TGME49_272420 278 YMHVMLR|TL 0.081 . TGME49_272420 292 SQFVTLR|GV 0.112 . TGME49_272420 299 GVPYDWR|LP 0.071 . TGME49_272420 311 LDYAQLK|TD 0.064 . TGME49_272420 317 KTDIEDR|YT 0.097 . TGME49_272420 324 YTEMNNR|KV 0.107 . TGME49_272420 325 TEMNNRK|VD 0.073 . TGME49_272420 344 LCYFLNR|IV 0.141 . TGME49_272420 351 IVDQAWK|DK 0.066 . TGME49_272420 353 DQAWKDK|YI 0.087 . TGME49_272420 370 ATGGSFK|AI 0.068 . TGME49_272420 373 GSFKAIK|SL 0.091 . TGME49_272420 402 FPAGLLR|DL 0.111 . TGME49_272420 429 PDHVVAR|VA 0.171 . TGME49_272420 432 VVARVAR|PT 0.263 . TGME49_272420 451 FAPLTGR|SD 0.109 . TGME49_272420 454 LTGRSDR|AA 0.592 *ProP* TGME49_272420 457 RSDRAAK|KA 0.235 . TGME49_272420 458 SDRAAKK|AE 0.126 . TGME49_272420 468 TTPTALR|WS 0.108 . TGME49_272420 476 SHSGEMR|RL 0.165 . TGME49_272420 477 HSGEMRR|LD 0.107 . TGME49_272420 494 GPESGAR|EL 0.096 . TGME49_272420 497 SGARELK|SE 0.147 . TGME49_272420 510 LLSELAK|DN 0.097 . TGME49_272420 517 DNVEVEK|EE 0.069 . TGME49_272420 527 EGETNTR|FH 0.073 . TGME49_272420 530 TNTRFHK|YP 0.149 . TGME49_272420 547 EEEELAK|AE 0.059 . TGME49_272420 551 LAKAEER|RD 0.068 . TGME49_272420 552 AKAEERR|DA 0.244 . TGME49_272420 557 RRDALLR|EF 0.083 . TGME49_272420 564 EFQLQNR|LS 0.075 . TGME49_272420 570 RLSHEDR|AA 0.197 . TGME49_272420 573 HEDRAAR|QR 0.175 . TGME49_272420 575 DRAARQR|ER 0.089 . TGME49_272420 577 AARQRER|YS 0.105 . TGME49_272420 584 YSLFVEK|EQ 0.064 . TGME49_272420 587 FVEKEQR|RL 0.093 . TGME49_272420 588 VEKEQRR|LE 0.121 . TGME49_272420 594 RLEEALR|VA 0.085 . TGME49_272420 600 RVAQEQR|LE 0.099 . TGME49_272420 621 LPANLQR|RV 0.144 . TGME49_272420 622 PANLQRR|VK 0.216 . TGME49_272420 624 NLQRRVK|TA 0.168 . TGME49_272420 629 VKTAQEK|MA 0.079 . TGME49_272420 642 DPGVPVR|CI 0.118 . TGME49_272420 647 VRCIWSK|FS 0.079 . TGME49_272420 670 LDTHPIR|IF 0.104 . TGME49_272420 697 PSTVQTK|VF 0.069 . TGME49_272420 711 MFLFADR|GF 0.083 . TGME49_272420 741 EQEEVMK|RD 0.061 . TGME49_272420 742 QEEVMKR|DI 0.183 . TGME49_272420 755 ESVPAGR|GA 0.126 . ____________________________^_________________

  • Fasta :-

    >TGME49_272420 CGTTTTCGGAGCTCATCCAGCGTTTACTAACTTGACTATGTATTGCATTCGTCACACTGC TGCATCGTCGAAAGCATGCGCGAGCGCTAAGGCTTTCCCGGTTCCGTAAATCCGAAGCTT GTCGGATTAAGCTCAGGTACGGCCGTTCACTTGACAAAACAGCCAACGGCGGTTTTTCAA CTCTCTGCTTGTGATGTCCCGTAAGGCAACACCATCCCTGTCTTTGTGTAGTCGGTCGTC TTGCCGCATTCGAATTTTTTTTTACTCCGATTAGTTGTCTGCGGAAACGAGCACACCGTA TCTTGACCCGGTGGAAGTGCTCATGGGTAGGCTTTTCTGTGTCGTGTAGCTCACCTTGTA AGCGTTTTCTTCCATTTTCTTCAGTTCATCTGTTTTCTGGCGCAGTTTCCGGTCACCTTA CATGTCGCACTGCCGTTTTCCACAGCGGTCAGTGTTCCGCTCCTTCCAGAATGGACTTCC TCTCTGGAGGAAGGAAGGGTAGAGTTTGCGCAAAACGTTTCCGACTCTCACCCATTCTTT GGTTTGCCAGTGCCCTCGTCCTCATTCCTCTCGGCTGTTCTCCCTTCAAGACGGACGTTG CGTTGTCGTCGCCTTTCTCCCCGTACCGGCCTTCCATTCATTCCGCTTCCACTTCTGCTT CCGCTCAAGAACCGCCGGCGTCTGTACATCCGACTCCATCCGCTGTTCCCTCGGATCCCC AAGTAGCGAGCCGAGTGGGACCTCACGGAGCCACAAAAAGCGGTTTTTCTCGTGCTACTC GCGAAAATGTTCCCGCCTTTCCCTCGCGTGACCCTTCATTTTCGACTTCCGTCCCGTCCT CTACCGTCTCTGAGACAGACAGCGGGATATTCGTTGTTTCTAGTCAAGACCCGGTAGCGA ATCAGGATCATGGAATTTCCTCTGTGCCGTCCACTGCGAGTGAGCCTGACTCGGGCGTGG ACCATGCACTGTTTGTTATTCCAGGCATAGCAGGAAGTGGCCTCTTCGCTACAGTTACGA ATGCCTCAGTTGCGTCATGCGGCAAATCCCCAATTAGTTATCCCAACCCCTTTCGTGTCT GGGCTTCACTGAGTCTCCTGCTTCCACCCGCTACTCATCAGAAGTGCTGGATTGATATGA TGAAGATGGTGGTCGACGAAAACGGAGAGGTGTACACCGGTCAAGAAGGCGTTCGCGTTG AGGTCGACGGATATGGCGGGATTCACGCGATTGATTACCTAGACTACTACATGAACAACA CCTACGGCGTCCCTGCCAGCGCGTACATGCATGTGATGCTCCGCACTCTCATGTCGCTCC ACTACTCGCAGTTCGTCACTCTCCGAGGGGTTCCTTACGACTGGCGCTTACCCCCTTGGC AACTGGACTATGCGCAACTCAAGACAGACATCGAGGACCGATACACGGAAATGAACAACA GAAAAGTTGACCTGATCGCCCACAGCTTGGGCAGCATTATTCTGTGTTACTTCTTGAACC GCATCGTCGACCAAGCGTGGAAAGACAAATACATCGGCTCGATGACGATCGTTGCGGCGG CGACTGGAGGCAGTTTCAAGGCGATAAAATCCCTGCTTTCGGGGTACGACGACGCAACTG ATGTAGATATCTGGAATGTCATCGATATCAGCCTGTTCCCCGCAGGTCTCTTGAGAGACT TGCTGCAAACCATGGGGTCGATTTTCGCACTTCTTCCGGATCCCGCGATCTACGGCCCGG ACCATGTGGTCGCGCGTGTCGCGCGTCCAACGCAGGTGCCGGCTTCATCCTCGGCATCTG CGTTTGCTCCGTTAACAGGCAGAAGCGACAGAGCTGCAAAAAAGGCTGAGGGAACGACGC CAACTGCGTTGCGTTGGTCTCATTCTGGGGAGATGCGCCGTCTCGACGCCGTTCTGACGG ACGAGGTAGGGGGACCGGAGAGTGGAGCAAGAGAGCTAAAGAGTGAACAGGCCTTCTCGC TGCTTTCTGAACTCGCGAAGGATAACGTGGAAGTCGAGAAAGAGGAGGCGGAGGGAGAAA CGAATACACGGTTTCACAAGTATCCTGACTTTGCTCCCGGTGATCAAATGGAAGAGGAAG AACTGGCGAAGGCAGAAGAACGGCGAGATGCACTGCTTCGAGAGTTTCAGTTGCAGAACC GTCTTTCGCATGAAGACAGGGCGGCAAGGCAAAGAGAGAGATACAGTCTGTTCGTCGAGA AGGAACAGCGGCGTTTGGAAGAGGCGCTTCGCGTGGCGCAGGAACAGAGGCTCGAGGAGG ATGTTTATACACTGTCCAATTGGACTTCGCTTCTTCCTGCAAATTTACAACGAAGAGTCA AGACTGCGCAAGAAAAGATGGCAGGTGTTGTGGCGGATCCCGGGGTCCCTGTCCGCTGTA TTTGGAGCAAGTTTTCTCAGCCCACGACGGATGTTGCGTACTACTACCCAACCGGGTCTT TAGATACTCACCCTATTCGCATCTTCGATTACGGCGACAATACGGTCCCTCTGGCCTCTC TTTCACTCTGCGCCTCTTGGCCCTCCACCGTGCAAACAAAAGTTTTCGACAATCTTGACC ACATGTTCCTCTTTGCGGATCGGGGATTCAATAATTTCATTTTCGATATCTTCAGTCCTG ATGCTAACCCGTTCTTGTCCTCCCTTTTGGGGGAACAGGAGGAAGTGATGAAACGTGATA TCCCCAGTCCGCAGGAGTCCGTGCCTGCTGGACGCGGTGCGATTATGGCAGACAGCACGT AG
  • Download Fasta

  • Fasta :-

    MDFLSGGRKGRVCAKRFRLSPILWFASALVLIPLGCSPFKTDVALSSPFSPYRPSIHSAS TSASAQEPPASVHPTPSAVPSDPQVASRVGPHGATKSGFSRATRENVPAFPSRDPSFSTS VPSSTVSETDSGIFVVSSQDPVANQDHGISSVPSTASEPDSGVDHALFVIPGIAGSGLFA TVTNASVASCGKSPISYPNPFRVWASLSLLLPPATHQKCWIDMMKMVVDENGEVYTGQEG VRVEVDGYGGIHAIDYLDYYMNNTYGVPASAYMHVMLRTLMSLHYSQFVTLRGVPYDWRL PPWQLDYAQLKTDIEDRYTEMNNRKVDLIAHSLGSIILCYFLNRIVDQAWKDKYIGSMTI VAAATGGSFKAIKSLLSGYDDATDVDIWNVIDISLFPAGLLRDLLQTMGSIFALLPDPAI YGPDHVVARVARPTQVPASSSASAFAPLTGRSDRAAKKAEGTTPTALRWSHSGEMRRLDA VLTDEVGGPESGARELKSEQAFSLLSELAKDNVEVEKEEAEGETNTRFHKYPDFAPGDQM EEEELAKAEERRDALLREFQLQNRLSHEDRAARQRERYSLFVEKEQRRLEEALRVAQEQR LEEDVYTLSNWTSLLPANLQRRVKTAQEKMAGVVADPGVPVRCIWSKFSQPTTDVAYYYP TGSLDTHPIRIFDYGDNTVPLASLSLCASWPSTVQTKVFDNLDHMFLFADRGFNNFIFDI FSPDANPFLSSLLGEQEEVMKRDIPSPQESVPAGRGAIMADST

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_272420161 SSEPDSGVDH0.997unspTGME49_272420161 SSEPDSGVDH0.997unspTGME49_272420161 SSEPDSGVDH0.997unspTGME49_272420377 SKSLLSGYDD0.997unspTGME49_272420566 SQNRLSHEDR0.997unspTGME49_272420746 SRDIPSPQES0.991unspTGME49_27242050 SSSPFSPYRP0.995unspTGME49_272420127 SSSTVSETDS0.996unsp

TGME49_072420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India