TGME49_272510 | aspartyl protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_272510SP0.0047990.9910580.004144CS pos: 21-22. STA-AK. Pr: 0.4462
No Results

  • Fasta :-

    >TGME49_272510 MKVWQLTVLASLWGTALHSTAAKIQHSNVSIPLSKIDTIYEKEHVKQLHQLRKMANRMKT IPEFLQLRQHPLSSVSEIPLHDQVIASKKLATYYGEISIGSEPERAFKVLFDTGSCEFWV PDETCLSMQCIGHTKYRRSASFQPRFNQNGKPSLMNVVYLSGTLQGYDGYDTVHLGNGIS VPHTNIGFGTLVDIPLLRDLAWDGIVGLGFKNHEISSRGVVPFLDHIVQTKALESKHLGN QFAYYLNADGGSMTFGGADLSKKEYPTEEFSWIPVDPSDSYWTVKVIGVHKEPRSTSSLA TVTKQLENGQTAVTQTDGKKSIVDTGTYLIYAPATVMENELSDISVSSCDDKKRLPDLIL QFLGNPQHGGDSVVEVRLSPDDYVLEFLEDDGSRECMLGIAMDDAAEEDALDGWTLGQVF LRCYYTVFDRDNLQIGFARAKH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_272510.fa Sequence name : TGME49_272510 Sequence length : 442 VALUES OF COMPUTED PARAMETERS Coef20 : 4.470 CoefTot : -0.030 ChDiff : -14 ZoneTo : 36 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.465 1.082 0.055 0.501 MesoH : -0.332 0.320 -0.329 0.291 MuHd_075 : 15.520 13.980 5.779 3.853 MuHd_095 : 16.674 19.061 6.011 5.699 MuHd_100 : 13.850 16.024 5.085 4.871 MuHd_105 : 13.781 14.156 4.813 3.980 Hmax_075 : 8.300 19.950 2.685 6.020 Hmax_095 : 16.200 16.100 2.149 6.080 Hmax_100 : 15.000 14.100 1.793 5.600 Hmax_105 : 16.100 15.400 2.203 6.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6030 0.3970 DFMC : 0.3184 0.6816 This protein is probably imported in chloroplast. f(Ser) = 0.1389 f(Arg) = 0.0000 CMi = 1.98413 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 442 TGME49_272510 MKVWQLTVLASLWGTALHSTAAKIQHSNVSIPLSKIDTIYEKEHVKQLHQLRKMANRMKTIPEFLQLRQHPLSSVSEIPL 80 HDQVIASKKLATYYGEISIGSEPERAFKVLFDTGSCEFWVPDETCLSMQCIGHTKYRRSASFQPRFNQNGKPSLMNVVYL 160 SGTLQGYDGYDTVHLGNGISVPHTNIGFGTLVDIPLLRDLAWDGIVGLGFKNHEISSRGVVPFLDHIVQTKALESKHLGN 240 QFAYYLNADGGSMTFGGADLSKKEYPTEEFSWIPVDPSDSYWTVKVIGVHKEPRSTSSLATVTKQLENGQTAVTQTDGKK 320 SIVDTGTYLIYAPATVMENELSDISVSSCDDKKRLPDLILQFLGNPQHGGDSVVEVRLSPDDYVLEFLEDDGSRECMLGI 400 AMDDAAEEDALDGWTLGQVFLRCYYTVFDRDNLQIGFARAKH 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_272510 2 -----MK|VW 0.058 . TGME49_272510 23 LHSTAAK|IQ 0.073 . TGME49_272510 35 VSIPLSK|ID 0.065 . TGME49_272510 42 IDTIYEK|EH 0.064 . TGME49_272510 46 YEKEHVK|QL 0.075 . TGME49_272510 52 KQLHQLR|KM 0.082 . TGME49_272510 53 QLHQLRK|MA 0.112 . TGME49_272510 57 LRKMANR|MK 0.111 . TGME49_272510 59 KMANRMK|TI 0.067 . TGME49_272510 68 PEFLQLR|QH 0.065 . TGME49_272510 88 DQVIASK|KL 0.061 . TGME49_272510 89 QVIASKK|LA 0.114 . TGME49_272510 105 IGSEPER|AF 0.113 . TGME49_272510 108 EPERAFK|VL 0.130 . TGME49_272510 135 QCIGHTK|YR 0.065 . TGME49_272510 137 IGHTKYR|RS 0.101 . TGME49_272510 138 GHTKYRR|SA 0.337 . TGME49_272510 145 SASFQPR|FN 0.183 . TGME49_272510 151 RFNQNGK|PS 0.064 . TGME49_272510 198 VDIPLLR|DL 0.089 . TGME49_272510 211 IVGLGFK|NH 0.057 . TGME49_272510 218 NHEISSR|GV 0.152 . TGME49_272510 231 DHIVQTK|AL 0.071 . TGME49_272510 236 TKALESK|HL 0.090 . TGME49_272510 262 GGADLSK|KE 0.065 . TGME49_272510 263 GADLSKK|EY 0.111 . TGME49_272510 285 DSYWTVK|VI 0.072 . TGME49_272510 291 KVIGVHK|EP 0.055 . TGME49_272510 294 GVHKEPR|ST 0.187 . TGME49_272510 304 SLATVTK|QL 0.099 . TGME49_272510 319 VTQTDGK|KS 0.059 . TGME49_272510 320 TQTDGKK|SI 0.145 . TGME49_272510 352 VSSCDDK|KR 0.062 . TGME49_272510 353 SSCDDKK|RL 0.096 . TGME49_272510 354 SCDDKKR|LP 0.167 . TGME49_272510 377 DSVVEVR|LS 0.071 . TGME49_272510 394 LEDDGSR|EC 0.081 . TGME49_272510 422 LGQVFLR|CY 0.108 . TGME49_272510 430 YYTVFDR|DN 0.098 . TGME49_272510 439 LQIGFAR|AK 0.111 . TGME49_272510 441 IGFARAK|H- 0.069 . ____________________________^_________________

  • Fasta :-

    >TGME49_272510 ATGAAAGTCTGGCAGCTTACAGTTCTCGCGTCGCTGTGGGGTACAGCGCTGCACTCAACG GCGGCGAAGATCCAACACAGCAACGTCTCTATACCTTTGTCCAAAATAGACACTATCTAT GAGAAAGAGCATGTCAAGCAGCTTCACCAGCTGCGAAAGATGGCTAATCGAATGAAAACG ATACCTGAGTTCCTTCAACTTAGGCAGCACCCGCTATCGTCGGTGTCGGAGATTCCGTTA CACGACCAAGTTATTGCGTCAAAAAAACTAGCCACTTACTATGGAGAAATAAGTATAGGA AGTGAACCTGAGAGGGCATTCAAAGTTCTGTTCGACACTGGATCGTGCGAGTTCTGGGTG CCAGATGAGACCTGTCTGTCCATGCAGTGCATTGGTCACACGAAGTATAGGAGAAGCGCA TCATTTCAGCCGAGGTTTAATCAAAACGGCAAGCCAAGCCTCATGAATGTCGTGTACCTG AGTGGCACACTCCAAGGCTACGACGGCTACGACACGGTGCACCTCGGCAATGGCATTTCT GTACCGCATACGAACATTGGGTTCGGCACGCTGGTGGACATTCCTCTACTGAGAGATCTT GCCTGGGATGGCATCGTTGGTCTTGGATTCAAGAACCACGAGATCTCCAGTAGGGGAGTA GTTCCGTTCCTTGACCATATCGTCCAAACGAAGGCCCTAGAATCCAAACATCTTGGGAAC CAGTTTGCTTACTACCTCAACGCGGACGGCGGTTCCATGACTTTTGGTGGCGCTGACTTG TCAAAGAAAGAATACCCCACGGAGGAATTCAGTTGGATTCCTGTGGACCCTTCAGACAGT TACTGGACAGTTAAAGTTATCGGTGTTCATAAAGAACCCCGATCCACCAGCTCGCTTGCC ACTGTGACGAAACAGCTAGAAAACGGGCAAACCGCAGTAACTCAAACGGATGGGAAAAAG TCGATTGTTGACACCGGCACCTACCTCATATACGCGCCTGCAACCGTTATGGAGAATGAG CTCAGTGACATCTCAGTTTCTTCCTGCGACGACAAAAAGAGACTTCCTGATTTGATTCTG CAGTTCCTGGGTAATCCGCAGCATGGAGGTGATTCTGTAGTAGAGGTGCGACTGAGCCCG GACGACTACGTCCTTGAATTCCTTGAAGATGATGGAAGCCGCGAGTGTATGCTTGGCATA GCTATGGATGACGCTGCAGAAGAAGATGCACTCGACGGCTGGACACTAGGACAGGTATTC CTCCGCTGTTACTATACAGTTTTCGATAGAGACAACTTGCAAATTGGATTTGCTCGGGCC AAACACTGAGAAATGGTGCTTTCTTCACCATGTTCGCAACATTGTACGTGAGTCGCGTAG TGATCCCACGTGGTGCAGTGAACAAATTGGTATCAATGAGTTGGCGCTCCACATGATTGC AACTCGTCTTCGAAAGTTACTACCGCTACGAAGTGATCACTGCATGACGTGACTCGGGAA GCAACCCTTAGATGCTCTCCAGGTATC
  • Download Fasta

  • Fasta :-

    MKVWQLTVLASLWGTALHSTAAKIQHSNVSIPLSKIDTIYEKEHVKQLHQLRKMANRMKT IPEFLQLRQHPLSSVSEIPLHDQVIASKKLATYYGEISIGSEPERAFKVLFDTGSCEFWV PDETCLSMQCIGHTKYRRSASFQPRFNQNGKPSLMNVVYLSGTLQGYDGYDTVHLGNGIS VPHTNIGFGTLVDIPLLRDLAWDGIVGLGFKNHEISSRGVVPFLDHIVQTKALESKHLGN QFAYYLNADGGSMTFGGADLSKKEYPTEEFSWIPVDPSDSYWTVKVIGVHKEPRSTSSLA TVTKQLENGQTAVTQTDGKKSIVDTGTYLIYAPATVMENELSDISVSSCDDKKRLPDLIL QFLGNPQHGGDSVVEVRLSPDDYVLEFLEDDGSRECMLGIAMDDAAEEDALDGWTLGQVF LRCYYTVFDRDNLQIGFARAKH

  • title: catalytic residue
  • coordinates: D112,D324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_272510261 SGADLSKKEY0.995unspTGME49_272510261 SGADLSKKEY0.995unspTGME49_272510261 SGADLSKKEY0.995unspTGME49_272510321 SDGKKSIVDT0.997unspTGME49_272510347 SDISVSSCDD0.994unspTGME49_272510379 SEVRLSPDDY0.998unspTGME49_27251034 SSIPLSKIDT0.993unspTGME49_272510139 SKYRRSASFQ0.99unsp

TGME49_072510      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India