TGME49_277990 | OTU family cysteine protease

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_277990OTHER0.9997210.0000370.000241
No Results

  • Fasta :-

    >TGME49_277990 MEVIVRCSNTRHRLILPTEATVEDLLVRVHALTGLSPARQVLKVGFPPQLVCFARGSEQR LVDAGVHAKDVIIVEERKGALNQLPEESLAPGRGPEERIDACDEKKGEPPKDRKELDEDG RENLHAPGKNRDVGSSDRRSEAHSQHLGNARTTLVSGRLPPSSSALSFPPSGVRTPEPSA GSPTPGLTEPLVSSSQNRRSESLAARGRSAGSSAPVPADGGGRRGTTETPSEKKARERSR EAVTGEIAQPGLVGEVFRFVVPSDNSCLFTCLSLLAAPDKQPQDLRDLVAAVIAGDPESF SSAILGKPRQEYIHWISEPTSWGGYVELAILAQQLRHEVLVVDVETRRKDFYGDRGTGKR IYLLYDGVHYDAVLALPRQRAFPGEFEKGEDRRGGGALFRVGAENRFCFCVFSPDDAETE AKVVELASELQRKRSFVNLKEMSLLCLVCGVGIRDQDEMRAHAKETGHANFEKIQAKQLE DLEVKRKRVEAIKHKKEMKSEEKGVT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_277990.fa Sequence name : TGME49_277990 Sequence length : 506 VALUES OF COMPUTED PARAMETERS Coef20 : 4.483 CoefTot : -0.098 ChDiff : -1 ZoneTo : 18 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.976 1.571 0.189 0.495 MesoH : -0.633 0.361 -0.334 0.213 MuHd_075 : 21.384 13.452 5.018 4.361 MuHd_095 : 27.686 18.584 8.718 5.808 MuHd_100 : 30.991 18.622 9.395 6.020 MuHd_105 : 28.721 15.554 8.773 5.225 Hmax_075 : 9.683 14.933 1.418 4.865 Hmax_095 : 12.600 14.900 2.260 5.060 Hmax_100 : 12.600 14.900 2.260 5.060 Hmax_105 : 13.417 14.817 4.185 4.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9205 0.0795 DFMC : 0.9400 0.0600
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 506 TGME49_277990 MEVIVRCSNTRHRLILPTEATVEDLLVRVHALTGLSPARQVLKVGFPPQLVCFARGSEQRLVDAGVHAKDVIIVEERKGA 80 LNQLPEESLAPGRGPEERIDACDEKKGEPPKDRKELDEDGRENLHAPGKNRDVGSSDRRSEAHSQHLGNARTTLVSGRLP 160 PSSSALSFPPSGVRTPEPSAGSPTPGLTEPLVSSSQNRRSESLAARGRSAGSSAPVPADGGGRRGTTETPSEKKARERSR 240 EAVTGEIAQPGLVGEVFRFVVPSDNSCLFTCLSLLAAPDKQPQDLRDLVAAVIAGDPESFSSAILGKPRQEYIHWISEPT 320 SWGGYVELAILAQQLRHEVLVVDVETRRKDFYGDRGTGKRIYLLYDGVHYDAVLALPRQRAFPGEFEKGEDRRGGGALFR 400 VGAENRFCFCVFSPDDAETEAKVVELASELQRKRSFVNLKEMSLLCLVCGVGIRDQDEMRAHAKETGHANFEKIQAKQLE 480 DLEVKRKRVEAIKHKKEMKSEEKGVT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_277990 6 -MEVIVR|CS 0.073 . TGME49_277990 11 VRCSNTR|HR 0.077 . TGME49_277990 13 CSNTRHR|LI 0.123 . TGME49_277990 28 VEDLLVR|VH 0.062 . TGME49_277990 39 TGLSPAR|QV 0.146 . TGME49_277990 43 PARQVLK|VG 0.059 . TGME49_277990 55 QLVCFAR|GS 0.153 . TGME49_277990 60 ARGSEQR|LV 0.225 . TGME49_277990 69 DAGVHAK|DV 0.139 . TGME49_277990 77 VIIVEER|KG 0.065 . TGME49_277990 78 IIVEERK|GA 0.094 . TGME49_277990 93 ESLAPGR|GP 0.089 . TGME49_277990 98 GRGPEER|ID 0.103 . TGME49_277990 105 IDACDEK|KG 0.062 . TGME49_277990 106 DACDEKK|GE 0.089 . TGME49_277990 111 KKGEPPK|DR 0.070 . TGME49_277990 113 GEPPKDR|KE 0.089 . TGME49_277990 114 EPPKDRK|EL 0.087 . TGME49_277990 121 ELDEDGR|EN 0.072 . TGME49_277990 129 NLHAPGK|NR 0.065 . TGME49_277990 131 HAPGKNR|DV 0.235 . TGME49_277990 138 DVGSSDR|RS 0.080 . TGME49_277990 139 VGSSDRR|SE 0.226 . TGME49_277990 151 QHLGNAR|TT 0.086 . TGME49_277990 158 TTLVSGR|LP 0.071 . TGME49_277990 174 FPPSGVR|TP 0.075 . TGME49_277990 198 VSSSQNR|RS 0.097 . TGME49_277990 199 SSSQNRR|SE 0.276 . TGME49_277990 206 SESLAAR|GR 0.136 . TGME49_277990 208 SLAARGR|SA 0.263 . TGME49_277990 223 PADGGGR|RG 0.074 . TGME49_277990 224 ADGGGRR|GT 0.146 . TGME49_277990 233 TETPSEK|KA 0.060 . TGME49_277990 234 ETPSEKK|AR 0.090 . TGME49_277990 236 PSEKKAR|ER 0.139 . TGME49_277990 238 EKKARER|SR 0.169 . TGME49_277990 240 KARERSR|EA 0.164 . TGME49_277990 258 LVGEVFR|FV 0.176 . TGME49_277990 280 LLAAPDK|QP 0.067 . TGME49_277990 286 KQPQDLR|DL 0.103 . TGME49_277990 307 SSAILGK|PR 0.076 . TGME49_277990 309 AILGKPR|QE 0.082 . TGME49_277990 336 ILAQQLR|HE 0.078 . TGME49_277990 347 VVDVETR|RK 0.075 . TGME49_277990 348 VDVETRR|KD 0.108 . TGME49_277990 349 DVETRRK|DF 0.084 . TGME49_277990 355 KDFYGDR|GT 0.101 . TGME49_277990 359 GDRGTGK|RI 0.067 . TGME49_277990 360 DRGTGKR|IY 0.126 . TGME49_277990 378 AVLALPR|QR 0.066 . TGME49_277990 380 LALPRQR|AF 0.081 . TGME49_277990 388 FPGEFEK|GE 0.069 . TGME49_277990 392 FEKGEDR|RG 0.087 . TGME49_277990 393 EKGEDRR|GG 0.209 . TGME49_277990 400 GGGALFR|VG 0.079 . TGME49_277990 406 RVGAENR|FC 0.097 . TGME49_277990 422 DAETEAK|VV 0.071 . TGME49_277990 432 LASELQR|KR 0.089 . TGME49_277990 433 ASELQRK|RS 0.089 . TGME49_277990 434 SELQRKR|SF 0.197 . TGME49_277990 440 RSFVNLK|EM 0.058 . TGME49_277990 454 VCGVGIR|DQ 0.101 . TGME49_277990 460 RDQDEMR|AH 0.097 . TGME49_277990 464 EMRAHAK|ET 0.102 . TGME49_277990 473 GHANFEK|IQ 0.080 . TGME49_277990 477 FEKIQAK|QL 0.083 . TGME49_277990 485 LEDLEVK|RK 0.053 . TGME49_277990 486 EDLEVKR|KR 0.122 . TGME49_277990 487 DLEVKRK|RV 0.121 . TGME49_277990 488 LEVKRKR|VE 0.143 . TGME49_277990 493 KRVEAIK|HK 0.064 . TGME49_277990 495 VEAIKHK|KE 0.070 . TGME49_277990 496 EAIKHKK|EM 0.112 . TGME49_277990 499 KHKKEMK|SE 0.115 . TGME49_277990 503 EMKSEEK|GV 0.077 . ____________________________^_________________

  • Fasta :-

    >TGME49_277990 ATCGTTTTCGGATGTCAGGAAGAAGCGTAGTCACGGCAGAACGCGTATCTCCCACAGCGT GCAACTTTGCTCCGGTTCCAAAAGACAACACACATTGCTCTCAGTTTTGCTGGCTTGTCG CGGCTTCTCCAATGGGAGAGTTCCGGCGACGCAGCACGAAATCAACGACAGAGATTGGTT TTTGTCTTCGCGAAAATAAGAGTTCTTCTGTGGACCTCACGGTCTCCGCGGTGGAGAGCG GTCCTCCGAATGGGTTCAGCTCAGGCCGATCACCCGCGGTCAGAAACTCTCAAATCGACG GAGGCTGGTTCTCTGGAACGAGGAACAACGAAGAGTGCGCCTGTTTTTCTGTGCGAGTGT CTGCGTGGGTGTCGCGACCCCGAGGCTCGCGTCAGCCAGAGTTCTGTTGAATAAGCCTCT GGAAGTGCAGAACTCAGGCGATCCCTTCCGGCTACGATACGCTGAGGTCGAGAAGGACGA ACGAGACGAGGAAAACGACGTTTTCAGACATCTTTGAGGCCTCCTTGACTCCGCAAGCTG GCCCCGAAAGTCTCAAACAGAAAGGCCGACGTGACTGCGACAAGACGAGGCTGTGCGTGC TGGTGAAACCTGCTCGACTTCTCTCCTCTCTCTCTGTGGAAAGAGAGAGAGCTCATATTT CCAGAGCAAAAGATCTCCGCGTTCCCTGCCTTTTCTGCTCTCTTCGACGCTTTACTGAAC ACACCGGAAAGCGACCGGACGAAAGACGCGTCTCACCGCGGGGTGTATGTACACCTCCTC CTGCGCAGCTGGCGAGGCGGCCGCGGTTGCGTCTCGACTCTCCCCAAGACTCGAGGCGCC GTGTGTGTGTTTGTGTGTCTGTTCGGTGCGTTTGAGTTCGACTTTTTGTTGCTTTTTCCT CTCTTTTCTTCTCGTCGCCTTCCTGGAGCGCCACACCGCCTGCAAAAGCGTTCCTCAACG TTCTTCGTCTCCCCGATACTCTCTGTCTCTCTGCCTCTCTGTCTCTCTGCCTTGTCGCCG TCCACCCTGAAGCATGGAGGTCATCGTGAGGTGCAGCAACACCCGGCACCGCTTGATTCT GCCGACAGAGGCGACGGTCGAGGACCTGCTGGTTCGCGTCCACGCCTTGACGGGTCTCAG CCCTGCGAGACAAGTTCTGAAAGTTGGCTTCCCGCCTCAGCTCGTCTGCTTCGCGCGAGG CAGCGAGCAGAGACTCGTCGACGCCGGTGTGCATGCGAAGGACGTCATCATCGTCGAGGA GCGGAAAGGAGCGTTGAACCAGCTGCCTGAGGAGTCGCTTGCGCCTGGGCGAGGCCCCGA AGAACGGATCGACGCGTGCGACGAGAAGAAGGGAGAGCCTCCGAAGGACAGAAAAGAACT CGACGAAGATGGCAGAGAGAATCTGCATGCGCCGGGAAAGAACCGAGACGTGGGTTCGAG CGACCGGCGATCAGAGGCTCACTCGCAACACCTTGGAAACGCCAGAACCACATTAGTCTC AGGACGGCTTCCACCCAGCAGCAGCGCCCTCTCTTTTCCGCCCTCGGGTGTACGTACACC TGAGCCGTCGGCTGGATCGCCCACCCCTGGCCTGACCGAGCCGCTGGTTTCTTCCTCGCA GAACAGACGGTCCGAGAGTCTCGCAGCTCGAGGGAGGTCTGCAGGGTCGTCTGCACCTGT GCCTGCGGATGGAGGCGGGAGGCGCGGTACGACGGAGACTCCGTCTGAGAAGAAAGCGAG AGAGAGGTCGCGAGAGGCGGTCACAGGCGAAATCGCGCAGCCTGGCCTCGTCGGCGAGGT CTTTCGTTTCGTCGTTCCGTCAGACAACAGCTGCTTGTTCACCTGTTTGTCGCTCTTGGC GGCGCCGGACAAGCAGCCGCAAGACCTGAGAGACCTCGTGGCGGCTGTGATCGCGGGCGA CCCTGAGTCGTTTTCCAGTGCAATTCTCGGGAAGCCTCGCCAGGAGTACATCCACTGGAT TTCCGAGCCGACCAGCTGGGGAGGGTACGTCGAGCTGGCGATCTTGGCGCAGCAGCTGCG GCACGAGGTCTTGGTGGTGGACGTCGAAACGAGGAGGAAAGACTTCTACGGAGACCGAGG AACGGGGAAGAGGATCTATCTTCTTTACGACGGCGTACACTACGACGCGGTGCTCGCGCT GCCGCGACAGAGAGCTTTTCCGGGGGAGTTTGAGAAGGGAGAGGACAGACGCGGAGGAGG CGCGCTCTTCCGCGTCGGTGCGGAGAACCGATTCTGCTTCTGTGTGTTCTCTCCCGACGA CGCAGAGACGGAGGCGAAAGTCGTCGAGCTCGCGAGTGAGCTGCAGAGGAAAAGGAGCTT CGTGAACTTGAAGGAGATGTCTCTCCTCTGCCTCGTCTGCGGAGTCGGCATTCGAGACCA AGACGAGATGCGTGCGCATGCAAAGGAAACAGGTCACGCGAACTTTGAGAAGATTCAGGC GAAGCAGTTGGAGGATCTGGAGGTGAAGAGGAAACGAGTCGAGGCTATAAAACATAAGAA GGAGATGAAGAGCGAGGAGAAGGGAGTCACGTAGAAGAGACGATGATGGTGAGAGTGGGG GAAGCGGTGTTTTTCGGAAGACGAGGTCGCTGGGAGAAGCGAGAGGAAATAAATGTACAG GGTCCCATAGAGGAGGAGGAGAAGAGCACAAGAAAGGCGTTTCTTTCTGTTTTGCAGTCG AACGTGAAGAGAGTGTTCGACACCGCAGGTCTTCAACACAGGGATGCTCGAGCGTTTTGG GAATACTTTTCAAGACTCGCCTTCCAGATGTTTTCGGTTCTTTTTTTCTCGACGCCCTCG CAGGTCCGTTTCCAGTGTATGTTCATCGTCAGGGAAGATCGACTGTCTGGCGCGTCGAGC TTCAGAACCGTCTACGTTCTCCAGACTGCGTCTCTGTGTTTCGCTGCGCCTGACTGTCGC ACAGTGAACGACTCTGAAGATGGAAACAGGAAATCGGAGTCGATTTTATAACTCGTGGTG TGCACTGTCCAGACACAGTCTTGTTGAAGAGGCTGTTAGCCGTG
  • Download Fasta

  • Fasta :-

    MEVIVRCSNTRHRLILPTEATVEDLLVRVHALTGLSPARQVLKVGFPPQLVCFARGSEQR LVDAGVHAKDVIIVEERKGALNQLPEESLAPGRGPEERIDACDEKKGEPPKDRKELDEDG RENLHAPGKNRDVGSSDRRSEAHSQHLGNARTTLVSGRLPPSSSALSFPPSGVRTPEPSA GSPTPGLTEPLVSSSQNRRSESLAARGRSAGSSAPVPADGGGRRGTTETPSEKKARERSR EAVTGEIAQPGLVGEVFRFVVPSDNSCLFTCLSLLAAPDKQPQDLRDLVAAVIAGDPESF SSAILGKPRQEYIHWISEPTSWGGYVELAILAQQLRHEVLVVDVETRRKDFYGDRGTGKR IYLLYDGVHYDAVLALPRQRAFPGEFEKGEDRRGGGALFRVGAENRFCFCVFSPDDAETE AKVVELASELQRKRSFVNLKEMSLLCLVCGVGIRDQDEMRAHAKETGHANFEKIQAKQLE DLEVKRKRVEAIKHKKEMKSEEKGVT

  • title: VCP interaction site
  • coordinates: I4,R13,K43,F46,P48,L50,H67,A68,K69,D70,V71,E75
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_277990321 SSEPTSWGGY0.993unspTGME49_277990321 SSEPTSWGGY0.993unspTGME49_277990321 SSEPTSWGGY0.993unspTGME49_277990500 SKEMKSEEKG0.996unspTGME49_277990136 SDVGSSDRRS0.997unspTGME49_277990231 STETPSEKKA0.996unsp

TGME49_077990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India