TGME49_280710 | 20S proteasome subunit beta 7, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_280710OTHER0.9998550.0000820.000063
No Results

  • Fasta :-

    >TGME49_280710 MASVTPLDVHLMKATTEDAAPGFAPKDTTVPIVTTSSVLGITYNNGILLVADTLASYGRM TRFKDASRFFTLGSHTAVASTGDYSDHQMMERTLSRYALKDFLHDDNSVRTAHQYAALLS RLMYQKRSRMDPWWLSVVVAGYQGERSEAREVSEEQKKPFTLGYVDMYGTFYEEEVIATG LGRYFAVTLMRNRHRPDMSEEEARQLLEECMRILFYRDCGASNRIQFTKVTAEGVSVEEP YVLDSKWDYEHYVKKTMDMGLAGCAW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_280710.fa Sequence name : TGME49_280710 Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 3.913 CoefTot : 0.122 ChDiff : -6 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.200 0.083 0.511 MesoH : -0.289 0.234 -0.309 0.181 MuHd_075 : 32.204 7.477 6.428 3.596 MuHd_095 : 17.090 12.075 5.926 2.709 MuHd_100 : 16.029 11.873 5.069 2.781 MuHd_105 : 11.934 9.502 3.822 2.409 Hmax_075 : 8.167 6.533 -0.754 3.001 Hmax_095 : 5.400 8.800 -0.271 2.940 Hmax_100 : 5.400 8.600 -0.271 2.790 Hmax_105 : 13.067 8.500 1.021 2.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9579 0.0421 DFMC : 0.9161 0.0839
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 TGME49_280710 MASVTPLDVHLMKATTEDAAPGFAPKDTTVPIVTTSSVLGITYNNGILLVADTLASYGRMTRFKDASRFFTLGSHTAVAS 80 TGDYSDHQMMERTLSRYALKDFLHDDNSVRTAHQYAALLSRLMYQKRSRMDPWWLSVVVAGYQGERSEAREVSEEQKKPF 160 TLGYVDMYGTFYEEEVIATGLGRYFAVTLMRNRHRPDMSEEEARQLLEECMRILFYRDCGASNRIQFTKVTAEGVSVEEP 240 YVLDSKWDYEHYVKKTMDMGLAGCAW 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_280710 13 LDVHLMK|AT 0.065 . TGME49_280710 26 APGFAPK|DT 0.082 . TGME49_280710 59 TLASYGR|MT 0.105 . TGME49_280710 62 SYGRMTR|FK 0.401 . TGME49_280710 64 GRMTRFK|DA 0.125 . TGME49_280710 68 RFKDASR|FF 0.088 . TGME49_280710 92 DHQMMER|TL 0.081 . TGME49_280710 96 MERTLSR|YA 0.106 . TGME49_280710 100 LSRYALK|DF 0.078 . TGME49_280710 110 HDDNSVR|TA 0.109 . TGME49_280710 121 YAALLSR|LM 0.087 . TGME49_280710 126 SRLMYQK|RS 0.061 . TGME49_280710 127 RLMYQKR|SR 0.273 . TGME49_280710 129 MYQKRSR|MD 0.092 . TGME49_280710 146 AGYQGER|SE 0.088 . TGME49_280710 150 GERSEAR|EV 0.192 . TGME49_280710 157 EVSEEQK|KP 0.065 . TGME49_280710 158 VSEEQKK|PF 0.096 . TGME49_280710 183 IATGLGR|YF 0.088 . TGME49_280710 191 FAVTLMR|NR 0.076 . TGME49_280710 193 VTLMRNR|HR 0.066 . TGME49_280710 195 LMRNRHR|PD 0.107 . TGME49_280710 204 MSEEEAR|QL 0.100 . TGME49_280710 212 LLEECMR|IL 0.083 . TGME49_280710 217 MRILFYR|DC 0.242 . TGME49_280710 224 DCGASNR|IQ 0.088 . TGME49_280710 229 NRIQFTK|VT 0.079 . TGME49_280710 246 PYVLDSK|WD 0.055 . TGME49_280710 254 DYEHYVK|KT 0.061 . TGME49_280710 255 YEHYVKK|TM 0.157 . ____________________________^_________________

  • Fasta :-

    >TGME49_280710 ATGGCGTCGGTGACCCCCCTGGATGTCCATTTGATGAAGGCGACGACGGAAGACGCAGCG CCAGGCTTCGCGCCGAAAGACACGACCGTCCCGATCGTCACAACTTCGTCAGTGCTAGGA ATCACCTACAACAATGGAATTCTCTTGGTCGCCGACACTCTCGCGTCTTACGGCCGGATG ACGCGCTTCAAGGACGCCTCGCGGTTCTTCACCCTGGGCTCGCACACTGCGGTCGCGTCC ACCGGGGACTACTCCGACCACCAAATGATGGAGCGAACGCTTTCGCGGTACGCTCTGAAG GACTTCCTCCACGACGACAACTCCGTTCGGACCGCACACCAGTACGCAGCTTTGCTGTCG CGACTGATGTATCAGAAGCGAAGTCGGATGGATCCCTGGTGGTTGAGCGTAGTCGTCGCA GGGTACCAAGGCGAGCGGTCGGAAGCGCGCGAAGTCTCCGAGGAGCAGAAGAAACCCTTC ACTCTCGGATACGTCGACATGTATGGCACTTTCTACGAGGAAGAGGTGATTGCTACCGGC CTTGGACGCTACTTCGCTGTCACTCTCATGAGAAATCGACACCGCCCAGATATGTCTGAA GAAGAGGCGCGACAGCTGTTGGAGGAGTGCATGCGAATTCTTTTCTACCGAGACTGCGGC GCGTCCAATCGGATTCAGTTCACGAAGGTCACAGCTGAAGGCGTCAGTGTGGAAGAGCCA TACGTTCTCGACAGCAAATGGGATTACGAGCACTACGTGAAGAAGACGATGGACATGGGT TTGGCGGGCTGCGCTTGGTGAACAGGGAGAAAGAGCTGTGTGTTTGAGAAGTTCCTCATC TCACTGGATAGGAAACTGAGAGTTTCCAAGAATGGTGAAGAGAGACGAACGCGAAGGAAC TGGACTTGGAGTACGCGGTTTTTAGGGACATGCATTTCACCTGTTTCCGCGAAGAATGAC AACAAGCATGTCGCGGTCGATGCCGTCTTGTTCTCTCTGTCGCGTCTGGCTGCTCTAGGG AGGCGAGCGTGAAGAGATGGTCGCTCTCTCTCTCTCTCGTCTTTTAGAGGGGCAGGTGCC GTGCAGTTTCGGTGATTCGAGCCTCGTGTACGCGTTTTCTTCTCGGTGTGTGATTCGCGC GAAGGACG
  • Download Fasta

  • Fasta :-

    MASVTPLDVHLMKATTEDAAPGFAPKDTTVPIVTTSSVLGITYNNGILLVADTLASYGRM TRFKDASRFFTLGSHTAVASTGDYSDHQMMERTLSRYALKDFLHDDNSVRTAHQYAALLS RLMYQKRSRMDPWWLSVVVAGYQGERSEAREVSEEQKKPFTLGYVDMYGTFYEEEVIATG LGRYFAVTLMRNRHRPDMSEEEARQLLEECMRILFYRDCGASNRIQFTKVTAEGVSVEEP YVLDSKWDYEHYVKKTMDMGLAGCAW

  • title: active site
  • coordinates: S36,D52,L54,R68,L181,D218,A221,S222
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_280710236 SAEGVSVEEP0.997unspTGME49_280710236 SAEGVSVEEP0.997unspTGME49_280710236 SAEGVSVEEP0.997unspTGME49_280710153 SAREVSEEQK0.992unspTGME49_280710199 SRPDMSEEEA0.996unsp

TGME49_080710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India