TGME49_281490 | glutamine amidotransferase subunit pdxt, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_281490OTHER0.9480160.0487850.003200
No Results

  • Fasta :-

    >TGME49_281490 MGEERPVCLGVLALQGAFFDHIKSFKRLNLGTRLRLTLVKKPADLEEIDALVIPGGESTA MRIIAGEEMMSALQAFVHEKKKPVWGTCAGCILLSNTVCTLETSSSPSASEIRETPSDDG YGDFIGGAAVRTCRNFFGRQVDSFEAPLRAVGRLKLAADGMHAICIRAPAIVDVSPEVEV LAYIDLPGRHTSVIAAAAHGPLLLTIFHPELTNDTRLHAFFLDNFVFPALGRASSAKATK REVEASGARNSEPSVSFPSGERRVSERAQAAQDAKSPQLGIRSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_281490.fa Sequence name : TGME49_281490 Sequence length : 284 VALUES OF COMPUTED PARAMETERS Coef20 : 3.481 CoefTot : -0.250 ChDiff : -1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.653 1.600 0.378 0.635 MesoH : -0.259 0.675 -0.273 0.321 MuHd_075 : 17.740 12.942 5.245 4.603 MuHd_095 : 10.767 2.598 1.838 2.950 MuHd_100 : 7.101 5.186 1.105 2.999 MuHd_105 : 5.300 8.808 0.732 2.754 Hmax_075 : 12.950 13.400 2.201 5.000 Hmax_095 : 12.513 10.150 1.816 5.005 Hmax_100 : 8.800 12.900 1.186 4.860 Hmax_105 : 10.500 15.900 1.992 5.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9258 0.0742 DFMC : 0.9497 0.0503
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 284 TGME49_281490 MGEERPVCLGVLALQGAFFDHIKSFKRLNLGTRLRLTLVKKPADLEEIDALVIPGGESTAMRIIAGEEMMSALQAFVHEK 80 KKPVWGTCAGCILLSNTVCTLETSSSPSASEIRETPSDDGYGDFIGGAAVRTCRNFFGRQVDSFEAPLRAVGRLKLAADG 160 MHAICIRAPAIVDVSPEVEVLAYIDLPGRHTSVIAAAAHGPLLLTIFHPELTNDTRLHAFFLDNFVFPALGRASSAKATK 240 REVEASGARNSEPSVSFPSGERRVSERAQAAQDAKSPQLGIRSS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_281490 5 --MGEER|PV 0.114 . TGME49_281490 23 AFFDHIK|SF 0.071 . TGME49_281490 26 DHIKSFK|RL 0.063 . TGME49_281490 27 HIKSFKR|LN 0.122 . TGME49_281490 33 RLNLGTR|LR 0.070 . TGME49_281490 35 NLGTRLR|LT 0.076 . TGME49_281490 40 LRLTLVK|KP 0.062 . TGME49_281490 41 RLTLVKK|PA 0.120 . TGME49_281490 62 GESTAMR|II 0.202 . TGME49_281490 80 QAFVHEK|KK 0.065 . TGME49_281490 81 AFVHEKK|KP 0.083 . TGME49_281490 82 FVHEKKK|PV 0.146 . TGME49_281490 113 PSASEIR|ET 0.079 . TGME49_281490 131 IGGAAVR|TC 0.076 . TGME49_281490 134 AAVRTCR|NF 0.205 . TGME49_281490 139 CRNFFGR|QV 0.281 . TGME49_281490 149 SFEAPLR|AV 0.130 . TGME49_281490 153 PLRAVGR|LK 0.108 . TGME49_281490 155 RAVGRLK|LA 0.086 . TGME49_281490 167 MHAICIR|AP 0.090 . TGME49_281490 189 YIDLPGR|HT 0.086 . TGME49_281490 216 ELTNDTR|LH 0.076 . TGME49_281490 232 VFPALGR|AS 0.084 . TGME49_281490 237 GRASSAK|AT 0.099 . TGME49_281490 240 SSAKATK|RE 0.060 . TGME49_281490 241 SAKATKR|EV 0.453 . TGME49_281490 249 VEASGAR|NS 0.092 . TGME49_281490 262 SFPSGER|RV 0.080 . TGME49_281490 263 FPSGERR|VS 0.239 . TGME49_281490 267 ERRVSER|AQ 0.127 . TGME49_281490 275 QAAQDAK|SP 0.086 . TGME49_281490 282 SPQLGIR|SS 0.159 . ____________________________^_________________

  • Fasta :-

    >TGME49_281490 AGAGACAGCGCGTCAGCCACTGCTCGTCAGTTCTTTCTTGCAAAAGAAGAAGGTTCTCTT CGCTCTCGAGAAATAAGGTTTCCCCGCGGTTTTCGTGTGGAGGAAAGCTGACAGGTCGCC TCGGAGCGCGAGGGCGCGCGGCGACCCTGCAGAGACATCCGCCAGGAGACCCCTCTACGA AGAGGAAAGGAAAGAGGAAAGAAAACACACAAAAAGACAAAAGAAAGAGCAAGAATTTCG CGGACAGAGGAGCGAGATCGATCTTTCCTTGAACAGGGAACTGAAAAAGCAAACCAGCCT CTTCATCAGGCAATGCGCGTCTCTCGCTGAACCAAGCCCCAAGGCCAGATGAACGGTCTT GTCTCACTTTCTGGCCTTCGCCTTTGAGATACTCTTGACATTTCTTCTCTCGCCAGCCAG CCTTCAATTCACCATCTACTCAAAAACCGAGTCTTCGTCTTCGTCTCTGTGGCCGCCTCG ACTCCTCCTCTGTGCTCTTCTGTTTTCGTCCTTTCTGTTTGTTCCTTTTCTTTTCTGTTT TTCGTTTTTTTTCCGCCCTCCGCTTTGCTCCTTTTGGAGGCTGCAGGTGCGACGGTTTCC CTGCGAGTGTGGAGAGGAAATCTTTTCCTGGACGAAGGCAAAGATGGGAGAAGAACGTCC AGTTTGTCTCGGCGTCCTCGCGCTCCAGGGCGCCTTCTTCGATCACATAAAGTCGTTCAA GCGCCTCAACTTGGGCACAAGGCTTCGCCTCACTCTGGTGAAGAAGCCTGCAGACTTGGA GGAGATCGACGCGCTTGTCATTCCTGGAGGCGAGTCGACGGCCATGCGGATCATCGCCGG AGAGGAAATGATGAGTGCTCTCCAGGCCTTTGTCCACGAAAAGAAGAAACCTGTGTGGGG TACTTGCGCAGGCTGCATTCTCCTCTCGAACACCGTCTGTACTCTCGAAACGTCTTCCTC GCCTTCCGCTTCTGAAATTCGGGAGACGCCAAGCGACGACGGGTACGGAGACTTCATTGG CGGTGCCGCAGTGCGGACCTGCAGGAATTTTTTCGGCAGACAGGTGGACAGCTTCGAGGC GCCGTTGCGAGCTGTCGGGAGACTCAAACTCGCCGCAGACGGCATGCATGCAATTTGCAT CCGTGCTCCCGCCATCGTGGACGTCTCCCCGGAGGTCGAAGTCCTTGCGTACATCGACCT CCCCGGTCGTCACACCAGCGTCATTGCAGCTGCTGCCCACGGGCCGCTCCTCCTCACAAT TTTCCACCCTGAGCTGACGAACGACACACGGTTGCATGCGTTCTTCCTCGACAACTTCGT CTTTCCTGCTCTCGGCAGAGCCTCCTCTGCGAAGGCGACAAAACGTGAGGTCGAGGCGTC TGGCGCGCGAAACAGCGAGCCGTCTGTCTCCTTTCCAAGCGGAGAACGCCGGGTCTCTGA GAGAGCGCAGGCAGCCCAAGACGCGAAGTCTCCACAGCTCGGCATCCGCTCTTCGTGAGG CGGACCACAAGTCTCCCCAGAATACTCTCGCGACTTGCTCTCGCTGGCTCCATCGAAGGT CGCTCCGGAGGCTGACGCATGCAACCGAGCAGCACAGACCCTGTGTCTGCTCTGTCCAGA GCATATCTGCACAGATCCTTGTGTGTGGATGACTGCATGCGCATTGGTTGGCAGGTGTGT CTACGTTGCTTCCGAGACGAGTTCACACAAATACCATTTTGATCGATTGTTTTCTGCATT GCGCCGCGGTTTCCTGAGGTTGTGCAGTGACGGCGCTGCACAACCTGTCATGTCTCCGAC TGCATGCAGAAAATGCTGCGTGCGTTCCAGTCACACTTGCGGATACCGAATAGCGACGAG GCTCTTGAGGCGCTGGGTGCTTCCCTTCTGAGCTTCGCCGTCGCTGGCCAGAGCGACAGC CTTTGCTGTGAAGTCTCGGGTGCCTTGGCACTTGCATGCAGGGAAGGAAACGCTCCCAGG GCCTCCCAGACCTCTTCGCTGCCTCACACACTCTCTGAAAAGCCGACGCCTACCACGAAT GGCCTCCCAGACGTACAAGCGAATCAGCAGACCTCTCTCTTCTTTTCCATAGACAAATTG ATTCATATACATATATATATGTTCACGATTATGTAGGCGTTGTAGTAGTTCTCACGCGCA ACTCACACAGATCCACGTATCTCGCGCAT
  • Download Fasta

  • Fasta :-

    MGEERPVCLGVLALQGAFFDHIKSFKRLNLGTRLRLTLVKKPADLEEIDALVIPGGESTA MRIIAGEEMMSALQAFVHEKKKPVWGTCAGCILLSNTVCTLETSSSPSASEIRETPSDDG YGDFIGGAAVRTCRNFFGRQVDSFEAPLRAVGRLKLAADGMHAICIRAPAIVDVSPEVEV LAYIDLPGRHTSVIAAAAHGPLLLTIFHPELTNDTRLHAFFLDNFVFPALGRASSAKATK REVEASGARNSEPSVSFPSGERRVSERAQAAQDAKSPQLGIRSS

  • title: conserved cys residue
  • coordinates: C88
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_281490235 SGRASSAKAT0.995unspTGME49_281490235 SGRASSAKAT0.995unspTGME49_281490235 SGRASSAKAT0.995unspTGME49_281490265 SERRVSERAQ0.998unspTGME49_281490108 SSSSPSASEI0.997unspTGME49_281490175 SIVDVSPEVE0.991unsp

TGME49_081490      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India