TGME49_289620 | cathepsin CPC1

_IDPredictionOTHERSPmTPCS_Position
TGME49_289620SP0.0042040.9957470.000049CS pos: 31-32. VKA-DL. Pr: 0.9411
No Results

  • Fasta :-

    >TGME49_289620 MEGMGSLRRRCAALPLVAGFLVFLGSIGVKADLPIHATVHDIKGDWTFYLSPAVPGDVSN CGSPSPNTNTSNLREELKDYKSFLSTQGGIKKELRVSLTDIPVSFATTRTAAALENPHRR TWKTLGVFDGQDKRKLVGSWTTVYDEGFEVDVGGRMRLMGFMKYNPQNNCSIVDGDLENS QGITDCYATDPTRTQIGWYIQQAEDGSRLSGCFYAEKPKAASSTPAAFVAIKETTRVEPA SGALIGTDLKDSTSYISQSFVDTHNASPASSWRAGVNSVFANMNRRDLSRFVKDFGFKKM RPAGDSADGLSFMQSSTDISTADGDAASTQVYACPCKKGERSLDTRKLDESEQTLEVLSP VSALEVGHTNFLAAINPHVHESTATNGLDAQGTQAVAKAALSGAGATNTQEPLLLPKDFS WSDPFSNQAFDETVTNQGSCGSCYAVAATYALQKRFEIAASRMLGQEIRLFSAVQDEADG ALSFLDLGSTSQLGELSAQSILSCSFYNQGCDGGFPYLVGKHARDIGVPQARCMEYQADH TQGCPFQKTASASESQSMLQADANAGACSEHARWYAKDYGYIGGCYECNHCSGEKQIMLE IYNNGPVPVAFDAPPSLFSYRSGVYDANSNHARVCDNDLPHHTGILTGWEYTNHAVTIVG WGETDGENGKPQKYWIVRNTWGPNWGVDGYVKIARGKNLGGIESQATFIDPDFSRGQGLK VAKAIEALKSKTM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_289620.fa Sequence name : TGME49_289620 Sequence length : 733 VALUES OF COMPUTED PARAMETERS Coef20 : 4.339 CoefTot : -0.046 ChDiff : -15 ZoneTo : 31 KR : 4 DE : 1 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.124 2.259 0.477 0.831 MesoH : -0.292 0.297 -0.264 0.230 MuHd_075 : 26.903 21.771 7.179 6.320 MuHd_095 : 19.574 13.711 5.376 4.382 MuHd_100 : 20.719 13.674 5.947 3.854 MuHd_105 : 22.685 17.396 6.311 4.280 Hmax_075 : 17.200 24.100 5.384 6.410 Hmax_095 : 12.600 20.500 2.909 7.240 Hmax_100 : 13.400 23.700 3.164 7.720 Hmax_105 : 18.600 15.800 4.312 5.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8542 0.1458 DFMC : 0.9294 0.0706
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 733 TGME49_289620 MEGMGSLRRRCAALPLVAGFLVFLGSIGVKADLPIHATVHDIKGDWTFYLSPAVPGDVSNCGSPSPNTNTSNLREELKDY 80 KSFLSTQGGIKKELRVSLTDIPVSFATTRTAAALENPHRRTWKTLGVFDGQDKRKLVGSWTTVYDEGFEVDVGGRMRLMG 160 FMKYNPQNNCSIVDGDLENSQGITDCYATDPTRTQIGWYIQQAEDGSRLSGCFYAEKPKAASSTPAAFVAIKETTRVEPA 240 SGALIGTDLKDSTSYISQSFVDTHNASPASSWRAGVNSVFANMNRRDLSRFVKDFGFKKMRPAGDSADGLSFMQSSTDIS 320 TADGDAASTQVYACPCKKGERSLDTRKLDESEQTLEVLSPVSALEVGHTNFLAAINPHVHESTATNGLDAQGTQAVAKAA 400 LSGAGATNTQEPLLLPKDFSWSDPFSNQAFDETVTNQGSCGSCYAVAATYALQKRFEIAASRMLGQEIRLFSAVQDEADG 480 ALSFLDLGSTSQLGELSAQSILSCSFYNQGCDGGFPYLVGKHARDIGVPQARCMEYQADHTQGCPFQKTASASESQSMLQ 560 ADANAGACSEHARWYAKDYGYIGGCYECNHCSGEKQIMLEIYNNGPVPVAFDAPPSLFSYRSGVYDANSNHARVCDNDLP 640 HHTGILTGWEYTNHAVTIVGWGETDGENGKPQKYWIVRNTWGPNWGVDGYVKIARGKNLGGIESQATFIDPDFSRGQGLK 720 VAKAIEALKSKTM 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_289620 8 EGMGSLR|RR 0.084 . TGME49_289620 9 GMGSLRR|RC 0.092 . TGME49_289620 10 MGSLRRR|CA 0.193 . TGME49_289620 30 LGSIGVK|AD 0.067 . TGME49_289620 43 ATVHDIK|GD 0.065 . TGME49_289620 74 TNTSNLR|EE 0.072 . TGME49_289620 78 NLREELK|DY 0.073 . TGME49_289620 81 EELKDYK|SF 0.066 . TGME49_289620 91 STQGGIK|KE 0.056 . TGME49_289620 92 TQGGIKK|EL 0.122 . TGME49_289620 95 GIKKELR|VS 0.078 . TGME49_289620 109 VSFATTR|TA 0.107 . TGME49_289620 119 ALENPHR|RT 0.101 . TGME49_289620 120 LENPHRR|TW 0.179 . TGME49_289620 123 PHRRTWK|TL 0.191 . TGME49_289620 133 VFDGQDK|RK 0.053 . TGME49_289620 134 FDGQDKR|KL 0.160 . TGME49_289620 135 DGQDKRK|LV 0.130 . TGME49_289620 155 EVDVGGR|MR 0.069 . TGME49_289620 157 DVGGRMR|LM 0.081 . TGME49_289620 163 RLMGFMK|YN 0.077 . TGME49_289620 193 YATDPTR|TQ 0.070 . TGME49_289620 208 QAEDGSR|LS 0.076 . TGME49_289620 217 GCFYAEK|PK 0.058 . TGME49_289620 219 FYAEKPK|AA 0.076 . TGME49_289620 232 AAFVAIK|ET 0.075 . TGME49_289620 236 AIKETTR|VE 0.072 . TGME49_289620 250 LIGTDLK|DS 0.064 . TGME49_289620 273 SPASSWR|AG 0.111 . TGME49_289620 285 VFANMNR|RD 0.064 . TGME49_289620 286 FANMNRR|DL 0.223 . TGME49_289620 290 NRRDLSR|FV 0.184 . TGME49_289620 293 DLSRFVK|DF 0.249 . TGME49_289620 298 VKDFGFK|KM 0.065 . TGME49_289620 299 KDFGFKK|MR 0.096 . TGME49_289620 301 FGFKKMR|PA 0.173 . TGME49_289620 337 VYACPCK|KG 0.069 . TGME49_289620 338 YACPCKK|GE 0.079 . TGME49_289620 341 PCKKGER|SL 0.112 . TGME49_289620 346 ERSLDTR|KL 0.160 . TGME49_289620 347 RSLDTRK|LD 0.076 . TGME49_289620 398 GTQAVAK|AA 0.085 . TGME49_289620 417 EPLLLPK|DF 0.074 . TGME49_289620 454 ATYALQK|RF 0.062 . TGME49_289620 455 TYALQKR|FE 0.225 . TGME49_289620 462 FEIAASR|ML 0.135 . TGME49_289620 469 MLGQEIR|LF 0.117 . TGME49_289620 521 FPYLVGK|HA 0.084 . TGME49_289620 524 LVGKHAR|DI 0.224 . TGME49_289620 532 IGVPQAR|CM 0.120 . TGME49_289620 548 QGCPFQK|TA 0.108 . TGME49_289620 573 ACSEHAR|WY 0.129 . TGME49_289620 577 HARWYAK|DY 0.120 . TGME49_289620 595 NHCSGEK|QI 0.060 . TGME49_289620 621 PSLFSYR|SG 0.097 . TGME49_289620 633 ANSNHAR|VC 0.159 . TGME49_289620 670 TDGENGK|PQ 0.056 . TGME49_289620 673 ENGKPQK|YW 0.072 . TGME49_289620 678 QKYWIVR|NT 0.096 . TGME49_289620 692 GVDGYVK|IA 0.062 . TGME49_289620 695 GYVKIAR|GK 0.102 . TGME49_289620 697 VKIARGK|NL 0.090 . TGME49_289620 715 IDPDFSR|GQ 0.095 . TGME49_289620 720 SRGQGLK|VA 0.081 . TGME49_289620 723 QGLKVAK|AI 0.078 . TGME49_289620 729 KAIEALK|SK 0.071 . TGME49_289620 731 IEALKSK|TM 0.065 . ____________________________^_________________

  • Fasta :-

    >TGME49_289620 ATTCAGCGATACGCAGCAGGTGAGGTAGCGTTTCGACCACCTGGACCCTGAGGGGGTGCG CTACGGGCTAGCTCCGATGAGCGGCGCCTTCTCAGTCCATTTGTTTGACATTCATCTGTT TCCTTCACTTATTCCCGCGACAGCGAGCTAAGCGAATGTGCTGTATCTCCATTTTGGGTA TAGCAGAGTCGCGTCGCTTGAGACGAACCGCGTCGATTCTCTCACGTGCCCTCGGCTTGG TCCCGAGCTGACTGGCGGCCAGGGAAGTGATTGCGGGGGAAAAACGCCGTGGACTTGGCA GCAGAAATGTGTTCTGAACGTCACTGAACACTAGGGAGGGAGGTCGCCTGGTTTCTTCTC TCTCACTTCACTACACATTCTTCATATATGTAGTCTTCCTCCTGAGCGGGCGTTTTGGGA TACGTTGGTGATGGGCCACTAGAAACATGGTGCACGGACCGCATGTTTCGTACCTTGTAG CTTCCCGTTTCTATTAGCAGTACATGGATTTTTGATTTCCCTTGATTTGTTACCGTTCCG TTATCTCTAGTATTTCTTCTGGCGCGAGTCTGCAATGGAGGGTATGGGGTCGCTGCGCAG GCGGTGCGCTGCACTACCGCTCGTCGCGGGGTTCCTTGTTTTTCTGGGTTCGATTGGCGT AAAAGCGGATCTTCCCATTCACGCCACGGTACATGACATCAAGGGAGACTGGACGTTCTA CTTGTCTCCAGCTGTACCCGGAGATGTTAGCAACTGCGGCTCCCCAAGCCCAAATACAAA CACTTCGAATCTCCGCGAAGAACTCAAGGACTACAAGTCATTCTTGAGCACTCAAGGGGG AATCAAGAAGGAACTACGGGTGTCACTGACTGACATTCCAGTCTCGTTCGCAACTACTCG CACTGCCGCCGCACTCGAGAATCCCCACAGGCGCACCTGGAAAACGTTGGGTGTTTTCGA TGGCCAGGATAAGCGGAAGCTTGTTGGCAGCTGGACAACGGTATACGACGAAGGTTTTGA GGTGGACGTTGGTGGCCGCATGAGGCTCATGGGGTTCATGAAATACAACCCGCAGAATAA CTGCTCGATCGTCGACGGGGACTTGGAGAACTCTCAAGGAATCACAGACTGCTACGCAAC CGACCCGACGCGAACGCAGATTGGTTGGTACATCCAGCAGGCAGAAGATGGCTCTCGTTT GTCAGGATGTTTCTATGCGGAGAAACCCAAGGCTGCAAGTTCAACTCCCGCCGCGTTCGT CGCGATCAAGGAAACCACGAGAGTTGAACCTGCTTCTGGTGCCTTGATTGGCACCGACCT GAAAGACTCAACTTCGTACATCTCTCAGTCGTTCGTGGATACACACAACGCGTCTCCTGC CTCAAGCTGGCGCGCGGGTGTCAACTCCGTTTTTGCGAACATGAACCGTCGAGATCTTTC TCGCTTTGTGAAGGATTTTGGCTTCAAAAAAATGCGACCTGCAGGTGACAGTGCCGATGG GCTTTCGTTCATGCAGTCTAGCACTGACATTTCAACTGCAGACGGAGACGCCGCCTCCAC ACAGGTGTATGCATGCCCGTGCAAGAAAGGCGAAAGGTCCCTAGACACGCGAAAGTTGGA TGAGTCCGAACAGACTCTGGAGGTGCTGTCTCCTGTGAGCGCTCTGGAAGTTGGACACAC AAACTTTTTGGCCGCAATCAATCCCCACGTTCACGAGAGCACAGCCACGAACGGACTCGA CGCTCAAGGCACGCAAGCTGTGGCAAAAGCAGCACTGTCCGGCGCGGGTGCAACGAACAC TCAGGAGCCCCTGCTACTCCCCAAAGACTTTTCGTGGTCGGATCCGTTCTCGAATCAGGC ATTTGATGAGACTGTCACCAACCAAGGCAGCTGCGGGAGCTGCTATGCCGTGGCAGCAAC CTACGCGCTGCAGAAGCGTTTCGAGATTGCAGCTTCTCGCATGCTTGGGCAGGAAATCCG ACTTTTCAGCGCCGTCCAGGACGAGGCGGACGGAGCGTTGTCCTTTTTGGACCTTGGCAG TACGAGCCAACTCGGCGAGTTGTCTGCACAGTCAATCCTGTCTTGCTCCTTCTACAATCA AGGCTGCGACGGAGGCTTCCCGTACCTCGTGGGGAAACACGCGCGAGACATTGGTGTTCC GCAAGCCAGATGTATGGAGTACCAAGCTGACCACACACAAGGCTGCCCATTTCAAAAGAC GGCTTCGGCCTCAGAGAGCCAATCGATGTTGCAGGCTGACGCGAATGCAGGAGCGTGTTC TGAGCACGCAAGATGGTATGCGAAGGACTACGGCTACATTGGCGGGTGCTACGAGTGCAA TCACTGCTCTGGTGAAAAACAGATCATGTTGGAGATTTACAATAACGGTCCAGTGCCAGT TGCGTTCGATGCACCGCCTTCTCTCTTTTCCTACAGATCCGGGGTCTATGATGCGAACTC GAATCACGCGCGCGTGTGTGACAACGATTTGCCCCACCACACCGGAATTCTCACCGGGTG GGAATACACGAACCACGCAGTCACAATTGTGGGATGGGGAGAGACAGATGGTGAGAACGG AAAACCGCAGAAGTATTGGATTGTTCGGAACACGTGGGGTCCCAACTGGGGTGTCGACGG ATACGTGAAGATTGCGCGCGGGAAGAACTTGGGGGGCATCGAAAGCCAAGCTACTTTCAT CGACCCAGATTTCTCCAGAGGTCAAGGCTTGAAAGTGGCGAAAGCTATTGAAGCTCTGAA AAGTAAAACAATGTGAGAGAAATGCCCCGTGAGGTTCTGCGCTAGTCGATTGCCTGGCAA AAACGCAGTGGAACGGGTTTCGACGGGTTCGTCTAGGACCACGGGAAACTTGCAAAAGAT GAATGTAGTGTTTTCTCAGCAGCTCGGGTATCCGCATACAGGGAGGCCTGAGCCATTTAA CGCGGAACGTTTCGACTGTCGGTTGTATGAGAGGCACTACAGCGCCATCTCAGAACAATA CGCTATAAGAATCAGATGCATATGACGCGTCATTTCAAGAGTCACCAGTTCTCGTGACTG TTCCGAGTGTTAAGTGCTAACACTCCAATGTCGTAAACCAATCATAACCATTTGCTTGAC TTCATCCAAACTACGATTTCTCCTCTGCAGAACTTAATTACCCATTGTGAGAAGGCGATA TCCTGCAACAGTCAGAAACTTCCGTGTGCGTCGGAAAGCATTCGCGTGGTGACCCAG
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  • Fasta :-

    No Results
  • title: active site
  • coordinates: Q437,C443,H654,N679
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_289620320 SSTDISTADG0.996unspTGME49_289620320 SSTDISTADG0.996unspTGME49_289620320 SSTDISTADG0.996unspTGME49_289620420 SPKDFSWSDP0.995unspTGME49_28962097 SELRVSLTDI0.998unspTGME49_289620271 SSPASSWRAG0.994unsp

TGME49_089620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India