TGME49_294360 | ubiquitin specific protease 39 isoform 2, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_294360OTHER0.9999930.0000070.000000
No Results

  • Fasta :-

    >TGME49_294360 MMTSPSTASPPPTRDSMADSPASSESPAGPQKRASLQEGSSLAEAAGAAKKRTPAPSPSA AAVSAPQTKQLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNT YAYMHALQEQHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRII YGKALDGADYIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNYDPVLQT LGELMRKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKH KKLNSNVVNDCFQGEVEVRTTTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNM IPHIPIFDLLQKFNGEQIQEATPGTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVT FPVKHLDLREYVHEDAPADLNPVAKYDLVANICHQGKPHDGQYKVHVLHAPTNEWFEIED LRVTQVLPQFVALSESYVQVYQRQDVAPDGSIDRCVVEAALQELQKREAKSAAVDDDDDI FAADSENEDEEEGPDAEGPKQEVETKLELGD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_294360.fa Sequence name : TGME49_294360 Sequence length : 571 VALUES OF COMPUTED PARAMETERS Coef20 : 3.855 CoefTot : -0.400 ChDiff : -12 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.947 1.571 0.422 0.481 MesoH : -0.700 0.334 -0.368 0.183 MuHd_075 : 25.339 10.901 4.717 4.105 MuHd_095 : 19.080 6.840 3.265 2.885 MuHd_100 : 16.802 4.490 2.919 2.615 MuHd_105 : 12.318 2.077 2.555 2.015 Hmax_075 : 11.800 3.237 0.266 2.179 Hmax_095 : 11.375 0.875 -0.423 1.531 Hmax_100 : 10.200 0.800 -0.583 1.780 Hmax_105 : 8.867 -1.900 -0.451 1.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9118 0.0882 DFMC : 0.9017 0.0983
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 571 TGME49_294360 MMTSPSTASPPPTRDSMADSPASSESPAGPQKRASLQEGSSLAEAAGAAKKRTPAPSPSAAAVSAPQTKQLRRTCPYLGT 80 IKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQEQHYVYLNLKDCRVYCLPENYEVKDASLDDII 160 YNLHPTYTKEDVAQLSTRIIYGKALDGADYIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNYDPVLQT 240 LGELMRKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNSNVVNDCFQGEVEVRT 320 TTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNMIPHIPIFDLLQKFNGEQIQEATPGTLKRYSLWRLPKYLVL 400 HVKRFSKNNFYVEKNPTIVTFPVKHLDLREYVHEDAPADLNPVAKYDLVANICHQGKPHDGQYKVHVLHAPTNEWFEIED 480 LRVTQVLPQFVALSESYVQVYQRQDVAPDGSIDRCVVEAALQELQKREAKSAAVDDDDDIFAADSENEDEEEGPDAEGPK 560 QEVETKLELGD 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_294360 14 ASPPPTR|DS 0.104 . TGME49_294360 32 SPAGPQK|RA 0.093 . TGME49_294360 33 PAGPQKR|AS 0.280 . TGME49_294360 50 EAAGAAK|KR 0.063 . TGME49_294360 51 AAGAAKK|RT 0.080 . TGME49_294360 52 AGAAKKR|TP 0.211 . TGME49_294360 69 VSAPQTK|QL 0.070 . TGME49_294360 72 PQTKQLR|RT 0.097 . TGME49_294360 73 QTKQLRR|TC 0.105 . TGME49_294360 82 PYLGTIK|RH 0.049 . TGME49_294360 83 YLGTIKR|HL 0.160 . TGME49_294360 92 LDFDFEK|VC 0.065 . TGME49_294360 111 ACLVCAR|YF 0.092 . TGME49_294360 116 ARYFQGR|GK 0.130 . TGME49_294360 118 YFQGRGK|NT 0.075 . TGME49_294360 138 YVYLNLK|DC 0.057 . TGME49_294360 141 LNLKDCR|VY 0.076 . TGME49_294360 152 PENYEVK|DA 0.077 . TGME49_294360 169 LHPTYTK|ED 0.060 . TGME49_294360 178 VAQLSTR|II 0.099 . TGME49_294360 183 TRIIYGK|AL 0.085 . TGME49_294360 201 VGLNNLK|RT 0.056 . TGME49_294360 202 GLNNLKR|TD 0.183 . TGME49_294360 220 CTVVPLR|NW 0.073 . TGME49_294360 246 TLGELMR|KI 0.101 . TGME49_294360 247 LGELMRK|IF 0.069 . TGME49_294360 252 RKIFNAR|NF 0.098 . TGME49_294360 255 FNARNFK|GI 0.117 . TGME49_294360 272 AVGVASK|KK 0.064 . TGME49_294360 273 VGVASKK|KF 0.109 . TGME49_294360 274 GVASKKK|FR 0.146 . TGME49_294360 276 ASKKKFR|IG 0.127 . TGME49_294360 293 FCWLMTR|VH 0.068 . TGME49_294360 299 RVHQSAK|HK 0.066 . TGME49_294360 301 HQSAKHK|KL 0.076 . TGME49_294360 302 QSAKHKK|LN 0.164 . TGME49_294360 319 QGEVEVR|TT 0.102 . TGME49_294360 336 QPPSVSR|VP 0.073 . TGME49_294360 353 PQAPIFK|DS 0.064 . TGME49_294360 358 FKDSLDR|NM 0.085 . TGME49_294360 372 IFDLLQK|FN 0.072 . TGME49_294360 387 ATPGTLK|RY 0.052 . TGME49_294360 388 TPGTLKR|YS 0.251 . TGME49_294360 393 KRYSLWR|LP 0.083 . TGME49_294360 396 SLWRLPK|YL 0.131 . TGME49_294360 403 YLVLHVK|RF 0.068 . TGME49_294360 404 LVLHVKR|FS 0.189 . TGME49_294360 407 HVKRFSK|NN 0.152 . TGME49_294360 414 NNFYVEK|NP 0.065 . TGME49_294360 424 IVTFPVK|HL 0.066 . TGME49_294360 429 VKHLDLR|EY 0.076 . TGME49_294360 445 DLNPVAK|YD 0.074 . TGME49_294360 457 NICHQGK|PH 0.072 . TGME49_294360 464 PHDGQYK|VH 0.056 . TGME49_294360 482 FEIEDLR|VT 0.071 . TGME49_294360 503 YVQVYQR|QD 0.083 . TGME49_294360 514 PDGSIDR|CV 0.100 . TGME49_294360 526 ALQELQK|RE 0.056 . TGME49_294360 527 LQELQKR|EA 0.167 . TGME49_294360 530 LQKREAK|SA 0.216 . TGME49_294360 560 PDAEGPK|QE 0.058 . TGME49_294360 566 KQEVETK|LE 0.058 . ____________________________^_________________

  • Fasta :-

    >TGME49_294360 CGGGCGACATGTCGCCAACTAGAAGCCAGAGTGCCATAGATGGTCCTCTCGGACCGCTCA GGTTGCGGAGGCCTGAGAGGCCGTCCTCCAGGGGGCACCCTCCTGGAACACGAAAAATGA AAAGACAGACAAGACACACCTGAAAAACCAACTCGCCTCGGCCGCAGAACGCGTTCTGCC TCTCTTTTCAGCTCGGTGTGAGGGCCTGCACCCGGCGCGAGCCACGCAGACGCCTCAAGA ACGAAACTGCTCTCTGGAACTGCAGCTTTTGAGCTGGGTTTTCCCCTGCGAGCGCGAGTC TCGCCGCTCCGCAAACCCCAGTCGGCACCGAGAACGCCTTTGGAGCCGAAACTCGCGGCA CACCAGCGAACAAAGAACGTTTGCTGCTGTGTGTGGCGGTTGGTCAAACTCAGGCGGCCG CTCCGCCAGGTATTGTCGAGGTGTCGATACACCCCAGGCGACGCTGCGCCGAGGCGGACG AGTGAGCTCTCCAGCCCGCAAAGAAGCGCGAAGACTTTTCAGAGTTTGCGAGACTTTTCT TGCCCTGCACGCTGCATGCGCGAACTGCCAACCGTTTCGTCCAAAGAATGCGCCACGAAC GGAGAACCAAAGGAAGGCAGACGTCGAAAATCGAACCGCAGCTTACGCGACGGTTTCGTC TATTGGGATTCCAGAAGGGAACCGTGAGACTCCGCGTTTCGAACGGGAAAACGGCGCGGA CCCCTCGCGCGCCTCTTGCTTCCAGAGCCCCAAATCTTCGAGAGAAGTCCCGCTGAATTG CCTTACCTCGTGATCAGTTCTGTTCCTTTGCCTTTTCCAAGGTCGCTCTTTCAATCTGTA GCCCACTTGCCACGGCCGTCGGGCTGCGGGTGGCCGAACGCAACTTGCCGGGAGGGCGTC GGCCCGTTTCGCCTCGGTCGACCGCAAGACTCTCTAGCTCGAGCAGTTGTTGACTGTTTT CCATGTGGACTCGTGAGTCCAGAAACGACGCTCGCCGCCGGAATTTTGTCCTCGTTTCCC GCGCTCTCCAACGACAGTCCCCCGTTCTGTCAACCCAAGAAGGACTGGGCCAGACACCAC GCACTGCCTTGGCACGCGGCGCGCGCACCTCTGAGTCACTCTCCCTCGCGTGTAGCCCGC GCCTCGCTCTGAGAAAAGGCATTTCGATCTCTTTCGTCGCGGAAAGGCCTTCCGATCGGC AGGTTACCTCGTGGACTGTCTTGCCTTTCTTCCCTCCCAGTCTTAGTCTTCTTCAAAGCA GCTCTCGCACACTGCTGCTCTGCGCCTGCTCTCCTCGTCGCCCCGACTGCTGTGTAGAGG CTTGTTGGAGTACTGGCGTTCTTCTTTGATGCCGACTATTAAAAGACTTTGTGGACACCG GGCAGAACAGGGCCAATGAAATCCGCTTCTTCGTGACTGTTTCTCCCTTGTTTAGCTGGC TCTCTCCACGCGTTCGAAGGCGCGTCTCCTCCCAACTTCCTACCATGATGACGTCTCCGT CCACGGCTTCTCCCCCGCCCACGCGAGACTCTATGGCAGACAGCCCTGCATCTTCGGAGT CTCCTGCGGGACCGCAGAAGAGGGCATCTCTGCAGGAAGGCAGTTCCCTTGCAGAGGCGG CGGGAGCTGCAAAGAAACGCACGCCTGCGCCTTCCCCCTCCGCCGCCGCAGTCTCTGCAC CGCAGACGAAACAGCTGCGCCGCACCTGCCCGTACCTGGGCACAATCAAGCGACACCTTC TCGACTTTGACTTCGAGAAAGTCTGCTGCATCTGTCTCTCCAACCAACATGTCTACGCCT GCCTCGTCTGTGCGCGCTACTTCCAAGGACGAGGCAAGAACACGTACGCCTACATGCATG CGCTCCAGGAGCAGCACTACGTGTACCTGAATCTGAAGGACTGCCGGGTGTACTGTCTTC CGGAGAACTACGAAGTGAAGGATGCGTCTCTGGACGACATCATCTACAATCTCCACCCGA CCTACACCAAGGAGGATGTTGCGCAGTTGTCGACTCGGATCATCTACGGAAAGGCGCTTG ATGGTGCAGACTACATCCCAGGATGTGTGGGCCTGAACAATTTGAAGCGCACGGACTTTT GTAACGCCATGATTCAATCTCTCTGCACCGTCGTCCCGCTGCGGAACTGGCTTCTGCTTC TCGATCTGTCGCACGTCCAAAACTACGACCCCGTGCTGCAGACGCTTGGCGAACTGATGA GGAAGATTTTCAACGCGCGCAACTTCAAAGGAATCGTCTCGCCACACGAGTTCCTCCAGG CCGTCGGCGTTGCCAGCAAGAAGAAGTTTCGGATCGGAGAGCAAGCAGACCCTCTGCAGT TTTTCTGTTGGTTGATGACGCGTGTCCATCAGTCTGCAAAGCACAAGAAACTCAACTCGA ATGTCGTGAACGACTGTTTCCAAGGAGAAGTGGAAGTCCGCACCACAACTGCAGAGGGAG AAGCAACTGGACAGCCGCCGTCCGTCTCGCGGGTGCCCTTCCTATTCCTCACGCTAGATC TGCCGCAAGCTCCCATCTTCAAGGATTCGCTGGACAGGAATATGATTCCGCACATTCCGA TTTTCGATCTGCTTCAAAAGTTCAACGGAGAGCAAATTCAGGAGGCAACTCCCGGGACGC TCAAGCGATACAGTTTGTGGCGGCTGCCAAAGTACCTCGTGCTGCATGTGAAACGTTTCT CCAAGAACAACTTCTACGTCGAAAAGAATCCGACGATTGTCACTTTCCCCGTCAAACACT TGGATCTCCGAGAGTATGTGCACGAGGATGCACCAGCCGACCTGAATCCCGTAGCCAAGT ACGACCTCGTTGCGAACATCTGCCACCAAGGAAAACCCCACGACGGACAGTACAAAGTCC ACGTCCTGCATGCGCCGACGAACGAATGGTTTGAGATCGAAGATCTTCGAGTAACGCAAG TTCTGCCGCAGTTCGTAGCCCTCTCTGAGTCGTACGTGCAAGTGTACCAGCGCCAGGACG TCGCTCCAGACGGTTCGATTGACCGGTGCGTGGTGGAGGCTGCGCTCCAGGAACTGCAGA AGAGAGAAGCGAAGAGCGCCGCGGTGGACGACGACGACGACATTTTTGCGGCAGATTCAG AAAACGAAGACGAAGAAGAAGGCCCAGACGCAGAGGGTCCTAAGCAGGAAGTCGAGACGA AGCTGGAGCTGGGCGATTGAAAGTCGGGGATTCGCCTGTGTGTGAGGCTGTTGCTGGAAA CGCTTCTCAGGAATCGTCTTCGTTCCTGCGTGAGCGAGATTCGAGCTCCAGTGTTTTGTT GGCGGAAGGGTACTGCATGCGCAGTGTCTTACACCGTTCTCGTTCTTGGGAGGTAATCGC GGACGAAGCCTCGGCGTTCGCGCGCGACCGAGACGGGGTGTCGGGTACGGAGCAAGAAAC GGACTTGTCGCAGAATGGCAAAGAGAGGAAAACGCACGGCTTGCAGGCTTGACACAGTAG ACGTCTCGGTTGCTTCACGCGAAGCCTCTGTGGGTCGGCATGTGTGCCGATTTTCTCACT CCGCACACAACTGCTGACGATTCGACACAGCGCATACACCCTAAATAACGGCAGAAGACG ATCAGCTCTCTTATTCTTCATTCGGACAGTTTTTGCTCTCTTTCGCTGCTTCTTCCACGA CACCCAGATTGTTTTTAATGACACGACGACTTCCAGGCGAACAGGGAAACCAGTCGGATG CACAAGTCCAGCGTTTTGAGCTGTTGTTTGAGCAGTGTAGTCGGGTGGCGAGTTCCACGA AGAAAGCAGTTCGCACCGTGACGTTCCCTCTGTGCACGTACGGTCAAGGGTAAACGGCTC TGCAGGTCGGACGCGACCGCGCGAGAGGCGTGAGAGCTACCTTCTGGGATGTGTGACCTC AGTAGCTACTCAGAAGGAAAAAGTGATAGCGACTTCGTTTTGAGCATTTCTCGACTCGAA AGCACCCCGAGAGGGACCACTGTCAAAGGACCTGGGGGAAGGCTGTCGATATGCGTAGGG CATTCACGCTTTGGGATCCTGAAGCGATAAATCCGAATCCATGCATTGATAATAGGATTA ACACAGTTCGAGTCAGGAAAACAACACATCATTTGCTTAAATAAAGCGAAGAACCTGTAT TCACATGGAATAACCTCTGCGTACCTCTGCGTAGCACCCCATGTTTACACATCCACACAC AAACATATATATATATATATATATATATATATATATTGGTCAGTGGTCTTTTTTCATCGG ATGCATTCGGCCGGTGAGTCAGTCGTACAGGGAGGTTTTGGGGGGGGGCGCAGAGAGAAC GAAATCTGCATTCAAGGGCGAGCCTTTGGAAAAAGCAACTCTGCCGCAGAAGAAGCCACG CTGCACAAGCACGTCCACTAT
  • Download Fasta

  • Fasta :-

    MMTSPSTASPPPTRDSMADSPASSESPAGPQKRASLQEGSSLAEAAGAAKKRTPAPSPSA AAVSAPQTKQLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNT YAYMHALQEQHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRII YGKALDGADYIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNYDPVLQT LGELMRKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKH KKLNSNVVNDCFQGEVEVRTTTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNM IPHIPIFDLLQKFNGEQIQEATPGTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVT FPVKHLDLREYVHEDAPADLNPVAKYDLVANICHQGKPHDGQYKVHVLHAPTNEWFEIED LRVTQVLPQFVALSESYVQVYQRQDVAPDGSIDRCVVEAALQELQKREAKSAAVDDDDDI FAADSENEDEEEGPDAEGPKQEVETKLELGD

  • title: Active Site
  • coordinates: N199,D204,Q462,D480
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_29436035 SQKRASLQEG0.997unspTGME49_29436035 SQKRASLQEG0.997unspTGME49_29436035 SQKRASLQEG0.997unspTGME49_29436057 STPAPSPSAA0.994unspTGME49_29436016 SPTRDSMADS0.997unspTGME49_29436023 SDSPASSESP0.991unsp

TGME49_094360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India