TGME49_300130 | apical membrane antigen 1 domain-containing protein

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:  GO:0020009      

  • Curated_GO_Components:  microneme      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >TGME49_300130 MTTQTTTKGSSRISRCTVALVFALSACATDALNIGNHAHQTRLASGKTSAKGDANPWAKI LERYNVPLVHGSGVYVDLGNTKILSKKKYREPGGKCPNYGKYIKTYQPTTNPEIWPNDFL KPVPYANTPQDTMPLGGGFAMPMHQISPVSLKDLKDEAEGLKTATGVSSYAVEHAKNIRD DLGHCIWWARMTSAHDTSSSATNSKEDYYRYAFVWDPKKEMCHIMYLNMQEMTGAGTYCK RGDSGPNLTWYCFHPEKSIEKNLVWGSAYARLDHASACPEHGLKNVHWGQWNGRSCQKMA VRKRISVGSATECAMELFNNSPSDNPTQYVGDEGRGWDKILDDVVGVLIPAGSTKKDQPH TRGVGINWANFYKKPSGSYCEMYDGVPNCLTSAPEQYAFVSLGDPNPDNAQLPPCSSATE GVVIPSHCSCPEGETSGSSSGVKCEDGKWVEGHVSCTCSLDEDTSVNIWLIAGPCIAAGV LLLGGLIYWMAQRNKREPAVEKPQIVDETREHAVRTRQNQADLLQEAEPSFWGEADNYGT SVILDSANIDKDF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_300130.fa Sequence name : TGME49_300130 Sequence length : 553 VALUES OF COMPUTED PARAMETERS Coef20 : 4.941 CoefTot : 0.060 ChDiff : -7 ZoneTo : 52 KR : 6 DE : 1 CleavSite : 44 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.035 2.212 0.525 0.836 MesoH : -0.094 0.391 -0.143 0.281 MuHd_075 : 31.095 18.047 8.608 6.506 MuHd_095 : 37.554 18.642 9.280 7.813 MuHd_100 : 39.094 22.334 10.111 7.979 MuHd_105 : 36.920 21.872 9.576 7.084 Hmax_075 : 8.517 9.333 -0.168 3.838 Hmax_095 : 13.212 11.025 3.528 3.693 Hmax_100 : 12.500 15.800 3.311 3.800 Hmax_105 : 12.900 11.800 3.661 3.790 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2111 0.7889 DFMC : 0.2549 0.7451 This protein is probably imported in mitochondria. f(Ser) = 0.1154 f(Arg) = 0.0577 CMi = 0.76531 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 553 TGME49_300130 MTTQTTTKGSSRISRCTVALVFALSACATDALNIGNHAHQTRLASGKTSAKGDANPWAKILERYNVPLVHGSGVYVDLGN 80 TKILSKKKYREPGGKCPNYGKYIKTYQPTTNPEIWPNDFLKPVPYANTPQDTMPLGGGFAMPMHQISPVSLKDLKDEAEG 160 LKTATGVSSYAVEHAKNIRDDLGHCIWWARMTSAHDTSSSATNSKEDYYRYAFVWDPKKEMCHIMYLNMQEMTGAGTYCK 240 RGDSGPNLTWYCFHPEKSIEKNLVWGSAYARLDHASACPEHGLKNVHWGQWNGRSCQKMAVRKRISVGSATECAMELFNN 320 SPSDNPTQYVGDEGRGWDKILDDVVGVLIPAGSTKKDQPHTRGVGINWANFYKKPSGSYCEMYDGVPNCLTSAPEQYAFV 400 SLGDPNPDNAQLPPCSSATEGVVIPSHCSCPEGETSGSSSGVKCEDGKWVEGHVSCTCSLDEDTSVNIWLIAGPCIAAGV 480 LLLGGLIYWMAQRNKREPAVEKPQIVDETREHAVRTRQNQADLLQEAEPSFWGEADNYGTSVILDSANIDKDF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_300130 8 TTQTTTK|GS 0.074 . TGME49_300130 12 TTKGSSR|IS 0.084 . TGME49_300130 15 GSSRISR|CT 0.418 . TGME49_300130 42 NHAHQTR|LA 0.151 . TGME49_300130 47 TRLASGK|TS 0.079 . TGME49_300130 51 SGKTSAK|GD 0.060 . TGME49_300130 59 DANPWAK|IL 0.072 . TGME49_300130 63 WAKILER|YN 0.098 . TGME49_300130 82 VDLGNTK|IL 0.061 . TGME49_300130 86 NTKILSK|KK 0.059 . TGME49_300130 87 TKILSKK|KY 0.096 . TGME49_300130 88 KILSKKK|YR 0.144 . TGME49_300130 90 LSKKKYR|EP 0.130 . TGME49_300130 95 YREPGGK|CP 0.062 . TGME49_300130 101 KCPNYGK|YI 0.080 . TGME49_300130 104 NYGKYIK|TY 0.059 . TGME49_300130 121 WPNDFLK|PV 0.087 . TGME49_300130 152 ISPVSLK|DL 0.086 . TGME49_300130 155 VSLKDLK|DE 0.068 . TGME49_300130 162 DEAEGLK|TA 0.060 . TGME49_300130 176 YAVEHAK|NI 0.080 . TGME49_300130 179 EHAKNIR|DD 0.095 . TGME49_300130 190 HCIWWAR|MT 0.135 . TGME49_300130 205 SSATNSK|ED 0.060 . TGME49_300130 210 SKEDYYR|YA 0.117 . TGME49_300130 218 AFVWDPK|KE 0.059 . TGME49_300130 219 FVWDPKK|EM 0.080 . TGME49_300130 240 GAGTYCK|RG 0.062 . TGME49_300130 241 AGTYCKR|GD 0.157 . TGME49_300130 257 YCFHPEK|SI 0.107 . TGME49_300130 261 PEKSIEK|NL 0.057 . TGME49_300130 271 WGSAYAR|LD 0.102 . TGME49_300130 284 CPEHGLK|NV 0.083 . TGME49_300130 294 WGQWNGR|SC 0.122 . TGME49_300130 298 NGRSCQK|MA 0.070 . TGME49_300130 302 CQKMAVR|KR 0.083 . TGME49_300130 303 QKMAVRK|RI 0.116 . TGME49_300130 304 KMAVRKR|IS 0.240 . TGME49_300130 335 YVGDEGR|GW 0.156 . TGME49_300130 339 EGRGWDK|IL 0.073 . TGME49_300130 355 IPAGSTK|KD 0.076 . TGME49_300130 356 PAGSTKK|DQ 0.094 . TGME49_300130 362 KDQPHTR|GV 0.243 . TGME49_300130 373 NWANFYK|KP 0.069 . TGME49_300130 374 WANFYKK|PS 0.158 . TGME49_300130 443 GSSSGVK|CE 0.070 . TGME49_300130 448 VKCEDGK|WV 0.086 . TGME49_300130 493 IYWMAQR|NK 0.067 . TGME49_300130 495 WMAQRNK|RE 0.063 . TGME49_300130 496 MAQRNKR|EP 0.461 . TGME49_300130 502 REPAVEK|PQ 0.064 . TGME49_300130 510 QIVDETR|EH 0.074 . TGME49_300130 515 TREHAVR|TR 0.088 . TGME49_300130 517 EHAVRTR|QN 0.110 . TGME49_300130 551 DSANIDK|DF 0.075 . ____________________________^_________________

  • Fasta :-

    >TGME49_300130 TTCCTGGTTTCGTCTTTTGTGAACAGGAGCTTGGGGAAGCAAAGGTCACTGCATGTGTTG CTGCAACTGCCGCAGAGGAGACATTATAGTATGTAGGATACTGAATACGACTGCAGTTAT GAGGTACAGATAACCACGTTCTTTCCGTGCCCAGCTGAAGGGGGCAGGCTCGGGGCGAAA GCTGCGGCGGTGTGCAATTTCCTTGTAACTGGGCTTCCCTATTCTGAAAGTCAAAACCGT ATTTCTCTGTTTGTCGTCGAAATATGTTTGTGCCAATGCAGTTTGGAGTGCCTCCGCCAC AACCAGGACGACGCGGTATTCGTGCTCATGAGCAGCGTCACTCTATGTAGCGTACAGATC ACGTGTACACAAAGACATGTACAACTCTTCTAACGCAGAAAATCAGTGTTTCTCCTTTTC AGAAAAGGCGTACAGCTCCGTCGACTGCAGCAAACCTACGTTAGTCAGAAGGCTCTTCAA AAATCCGTCGCGTCGTCGCCGGATCTTTCTACACGCCTCGTATGAGCCGTATGACGGAAC TTTGTATAGCAGCCTACGAACGCCAGCAGTGCTGAGGCGACAAAGTCTGTTATGAAGCAG TACACGGCACAGGGTGTTTCGACTCTAAAGCAAAGACTTGAGACCGAGTCACATGTTGTC CATGGTTTTGGCGTATCTGTGTTGCGTCTGTTTCACATTCGAAACTGAATCGCGACTCTT CAGAATGGAGCCCTCCGGGGGAGTGCGCTTGCAATTGTGTGTGGGCACAAGCGGGTTCGT CCAGTGGGGAATATCCGCCTGCGTTGCAGTTTACCGGAGATGTTGTGAAGGGAAGGCGCG CTATGATGGCTTCGGCCTCTCTTCGGGACATTGAGATGGAGAAAGCCACACGGATTTCAC GTACGTTGTTCGAGTTGCGTACGCTGGCGGATCCCAGCTCGCTCGACTGCATAAAAGAAA CGGCGGTGCAGTGCACGGGGAGCTGTCAGATGCTCCATGAGGAACAATAAACGAGAAATG CGACTTTGTCTGGTTAAGATCTTGCGAAAAGACCTACTGAAAGCATGCGACGCCGGGGGA AATCCGGAAGAAAATTCCGTGGGGAAGCTGCTGGTGACACAAAGCTTGGCGTCTGCCCGA CTGCCACAGAGCGCCCTTGCCTAACCCAGTGGTTGTGGCACTGTCGTCTTTCCCGAGAGT TGAGTACAACATCAGTGTGTGCATTTTCGGATGTTTCTTCAGGGTTTCCTCCAGATTCCC CTGTCCGTTTTCTTCCGGAACAAGGGGACACCTTGATGGAGACAGTGTGAACCGAGGCAG AAAGCACGGAGCTATGAAACTCTAACGGGGAGCCGTTCTCTTGCCACTTCGCTTGCAGTG CTCTCGGATCGCTGCCAGTGAGGTACCGGGGGGCAATCGATCCGCGGCACAGTAGTTGGC TATGACGTCGACCCAGCGATGAGGCGCGCTAGGCGGGGATCAAGTGTGCGTATGTTTCGC GAAAAGAGTTTGCTCGACTTTCCTTTTGCGTTTCGGTCGTTTCAGTAGTAGATGGGCCTT CTGTTTTCTCTGCTGTTCTCAGCGCAGTGTCGCGAAACATAACCGTCGTTCCGGCTGTAG CGGCACTAACCGGGCTCCGGCGAGGGCACCCACGGGAGCGATGAAGAAACCCTCTGTCGA AGCGTTGTTGTGACTCGGCGTCTCCCGGACTCTATAGCTTTTTCACACGCAGCACACTCT CTTGTTTGTGTCAGATACCCTACCCAACAGTGCCGCTTGCTGCGCCCCCAGGACTGTTTC CCCGACGCCTCGCCAGCTCGAAATCGGCAGCGGCGTCAGTCTCTCATACGTCCGCCGGTT TGCGAAGGCCCTCTCTACGTTCTGAGAGGAACTTGCTAGCAACTCCAGGGTTTCAGTTGC TAGCTGCGCAGTTGTCTGCCAGAGCGACTCAACCTTACCGCGTTTCCTCCAGTCTCCGTA CTCCCGGCGTGTCGAGTTCCAGTCCGGGGGCACACAGTTCCCGACGGTGAAAAGGTTGCC GCTCCCCTTGCTCGTCGACAACGAGAGAAAAAGATTGATTCGCAGAGCATTTCCGTCGCT CCGGTCCTCCCCTCCCGCGGATCCTTGTTCTCCGTCGTTTCAGGCAAGATGACGACGCAA ACAACCACGAAAGGGTCGTCGCGGATCTCGCGGTGCACCGTTGCCCTCGTTTTTGCTTTG TCGGCATGCGCCACTGACGCATTGAATATCGGCAACCACGCTCACCAAACAAGACTGGCG TCCGGAAAAACTTCGGCGAAGGGTGACGCCAATCCGTGGGCCAAGATCCTTGAAAGATAC AACGTGCCTCTCGTGCACGGTTCTGGCGTCTATGTCGACTTGGGGAACACAAAGATTCTC AGCAAGAAAAAGTACCGCGAGCCTGGCGGGAAGTGTCCCAACTATGGCAAGTACATCAAG ACGTACCAGCCCACCACGAACCCGGAAATTTGGCCTAACGATTTTTTGAAGCCAGTGCCG TACGCAAATACACCCCAGGACACGATGCCGCTCGGAGGCGGCTTCGCCATGCCCATGCAT CAGATCAGCCCGGTGTCGCTGAAAGACCTGAAGGACGAGGCGGAGGGGCTGAAAACCGCC ACTGGGGTCTCGTCGTATGCCGTTGAGCATGCCAAGAACATCAGAGATGACTTGGGGCAT TGCATATGGTGGGCTCGCATGACGTCCGCGCACGACACGTCGTCGAGCGCGACTAACTCG AAAGAAGACTACTACCGGTACGCTTTCGTCTGGGACCCGAAGAAGGAAATGTGCCACATC ATGTACTTGAACATGCAGGAGATGACGGGAGCAGGAACGTACTGCAAGAGGGGGGACTCA GGCCCCAACCTGACGTGGTACTGCTTCCACCCGGAGAAGTCCATCGAGAAAAACCTCGTC TGGGGCAGCGCATACGCGCGCCTCGACCACGCTTCTGCGTGTCCGGAACACGGCTTAAAA AACGTTCACTGGGGGCAGTGGAACGGGAGAAGTTGCCAGAAAATGGCCGTCCGGAAACGC ATCTCTGTAGGCAGTGCTACCGAATGTGCCATGGAGCTGTTTAACAACAGTCCGAGCGAC AACCCGACGCAGTACGTCGGCGACGAGGGCCGTGGGTGGGATAAAATCCTCGACGACGTG GTTGGAGTCCTCATCCCCGCAGGATCCACCAAGAAAGACCAGCCGCACACGCGCGGAGTT GGCATCAACTGGGCGAACTTCTACAAAAAGCCCAGCGGTTCCTACTGCGAAATGTACGAT GGCGTCCCGAACTGCCTCACGTCTGCGCCTGAGCAGTACGCGTTCGTGAGTCTCGGCGAT CCAAACCCAGACAACGCACAACTTCCGCCTTGCTCATCCGCCACAGAAGGCGTTGTCATT CCCTCCCACTGCTCTTGCCCTGAAGGAGAGACAAGCGGAAGCAGCTCTGGTGTAAAGTGC GAAGACGGCAAATGGGTGGAGGGCCATGTCTCCTGCACCTGCTCACTCGATGAGGACACC AGCGTCAACATCTGGCTTATTGCGGGACCGTGCATTGCCGCTGGAGTGCTGTTGCTCGGA GGACTGATATACTGGATGGCACAAAGGAACAAGCGCGAACCGGCTGTTGAAAAGCCTCAA ATCGTGGACGAGACAAGGGAGCACGCCGTTCGAACCCGCCAGAACCAAGCAGACCTGCTG CAGGAAGCGGAACCTTCATTCTGGGGAGAAGCTGACAACTATGGCACAAGCGTCATTCTC GACTCCGCCAACATTGACAAGGACTTTTGAAACTTCACTCGTTTACGAGGATAGAAATTC AGGCACTCTGCTGCGCGTTGGGAATGCCGAGCTTCCCAGCTTTTTCAATTGACAGATGCG AAACAGTCGCTCTGCGACATGTATGCTAATTAGAGGTGAGGGGACATCTCAAATGAAGAC ACAGTCCACTTGCGAGGTCACGGCAGGTCCTCTCCTCCCGGTTTGCCGCCATCCCACGGT GGCGCAGGTTTCACCACACTGTCGATTTCTTCCAGAAACGAACGGACACGTCGATTCGAC CACCCGCGGTCTTCCTGTCTTGTTTGAGACTGTCTACCCACACTGCGAAGCATTCGAAGG AGAGACGGGGAAAGCCAGAGGGGAAGGGGGTTACCGTGCAAGTATCTACGGGAGTCGTGC CGTTCCCGTTACTTTTTGTGCCCTTCACTGTCTGAAAAGTGCTTCTTCGCTCTTGGTCTG TCCCCAGTGCCTTCGCTGCTCTCTCGAGGGAGGGTGTTTTTTTGTGCCCAGTTTCTCCGT TTCTGCCCAGCAACTACAAGGAAGCGGATTCGTCCATTTCCTAATTCTTCATCGCACTGA GT
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_300130204 SSATNSKEDY0.996unspTGME49_300130204 SSATNSKEDY0.996unspTGME49_300130204 SSATNSKEDY0.996unspTGME49_300130321 SLFNNSPSDN0.995unspTGME49_30013049 SSGKTSAKGD0.99unspTGME49_300130150 SISPVSLKDL0.997unsp

TGME49_100130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India