TGME49_304680 | ubiquitin family protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_304680OTHER0.9999950.0000040.000000
No Results

  • Fasta :-

    >TGME49_304680 MQISIADDDSGVVFSLEVSAGTTVDALKALIEAETRIPPNEQQLLVDMQPISRDAATVGA AGIPDGSMILVRRLPEAPVPALAASPPSVGSTDAVAPPVSGASGRSRQAGSTGGRRGQQS LQSLFDFSNIVVKDGKAKAQTRQRETTPRPARSATHHASSAERTEGRAGTPPLSDDEYLK QQAQTLINVCAAQEATLSVLALENPPLGEVLRQAVKESREGRGETESFGKLVEHLRKQLE ERRKAEESRLQQLNSALANPLSAAAQAFMMKEIHEKQVEDNYLLAQEHLPEAFGSVYMLF IDIEVNGVPIKAFVDSGAQSTFMSYACAQKCSLLRLMDTRYRGVAQGVGKTEIVGKIHLA TLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRYQCCIDLKKSVLRIDNEEIPFLSEKDIT KGMFGRADTPNSLGSPTATSSGEDKKMDVDSSSSSSSSSSSSASPGPLRQQSTTSLEPQD EAKVQQLVDLGFLRTDAVDALAIAGGNVEAAATFLFNQQQHDQENLS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_304680.fa Sequence name : TGME49_304680 Sequence length : 527 VALUES OF COMPUTED PARAMETERS Coef20 : 3.875 CoefTot : 0.098 ChDiff : -12 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.141 1.518 0.161 0.601 MesoH : -0.431 0.395 -0.271 0.231 MuHd_075 : 23.179 4.706 5.130 1.278 MuHd_095 : 5.227 2.514 2.151 0.319 MuHd_100 : 5.722 3.390 1.647 0.232 MuHd_105 : 3.736 5.787 1.066 0.748 Hmax_075 : 15.167 13.300 1.823 4.340 Hmax_095 : 3.900 9.450 0.004 3.194 Hmax_100 : 3.900 11.600 -0.090 3.590 Hmax_105 : 2.917 11.667 0.025 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9960 0.0040 DFMC : 0.9888 0.0112
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 527 TGME49_304680 MQISIADDDSGVVFSLEVSAGTTVDALKALIEAETRIPPNEQQLLVDMQPISRDAATVGAAGIPDGSMILVRRLPEAPVP 80 ALAASPPSVGSTDAVAPPVSGASGRSRQAGSTGGRRGQQSLQSLFDFSNIVVKDGKAKAQTRQRETTPRPARSATHHASS 160 AERTEGRAGTPPLSDDEYLKQQAQTLINVCAAQEATLSVLALENPPLGEVLRQAVKESREGRGETESFGKLVEHLRKQLE 240 ERRKAEESRLQQLNSALANPLSAAAQAFMMKEIHEKQVEDNYLLAQEHLPEAFGSVYMLFIDIEVNGVPIKAFVDSGAQS 320 TFMSYACAQKCSLLRLMDTRYRGVAQGVGKTEIVGKIHLATLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRYQCCIDLK 400 KSVLRIDNEEIPFLSEKDITKGMFGRADTPNSLGSPTATSSGEDKKMDVDSSSSSSSSSSSSASPGPLRQQSTTSLEPQD 480 EAKVQQLVDLGFLRTDAVDALAIAGGNVEAAATFLFNQQQHDQENLS 560 ................................................................................ 80 .......................................................................P........ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_304680 28 TTVDALK|AL 0.072 . TGME49_304680 36 LIEAETR|IP 0.069 . TGME49_304680 53 DMQPISR|DA 0.121 . TGME49_304680 72 GSMILVR|RL 0.086 . TGME49_304680 73 SMILVRR|LP 0.128 . TGME49_304680 105 VSGASGR|SR 0.166 . TGME49_304680 107 GASGRSR|QA 0.173 . TGME49_304680 115 AGSTGGR|RG 0.092 . TGME49_304680 116 GSTGGRR|GQ 0.103 . TGME49_304680 133 FSNIVVK|DG 0.077 . TGME49_304680 136 IVVKDGK|AK 0.062 . TGME49_304680 138 VKDGKAK|AQ 0.077 . TGME49_304680 142 KAKAQTR|QR 0.093 . TGME49_304680 144 KAQTRQR|ET 0.093 . TGME49_304680 149 QRETTPR|PA 0.141 . TGME49_304680 152 TTPRPAR|SA 0.603 *ProP* TGME49_304680 163 HASSAER|TE 0.114 . TGME49_304680 167 AERTEGR|AG 0.093 . TGME49_304680 180 SDDEYLK|QQ 0.061 . TGME49_304680 212 PLGEVLR|QA 0.099 . TGME49_304680 216 VLRQAVK|ES 0.062 . TGME49_304680 219 QAVKESR|EG 0.086 . TGME49_304680 222 KESREGR|GE 0.428 . TGME49_304680 230 ETESFGK|LV 0.081 . TGME49_304680 236 KLVEHLR|KQ 0.074 . TGME49_304680 237 LVEHLRK|QL 0.093 . TGME49_304680 242 RKQLEER|RK 0.079 . TGME49_304680 243 KQLEERR|KA 0.166 . TGME49_304680 244 QLEERRK|AE 0.088 . TGME49_304680 249 RKAEESR|LQ 0.074 . TGME49_304680 271 AQAFMMK|EI 0.076 . TGME49_304680 276 MKEIHEK|QV 0.093 . TGME49_304680 311 VNGVPIK|AF 0.073 . TGME49_304680 330 SYACAQK|CS 0.057 . TGME49_304680 335 QKCSLLR|LM 0.084 . TGME49_304680 340 LRLMDTR|YR 0.119 . TGME49_304680 342 LMDTRYR|GV 0.131 . TGME49_304680 350 VAQGVGK|TE 0.066 . TGME49_304680 356 KTEIVGK|IH 0.065 . TGME49_304680 363 IHLATLK|IG 0.058 . TGME49_304680 367 TLKIGQR|FF 0.086 . TGME49_304680 380 TVLQDNK|VE 0.053 . TGME49_304680 391 FGLDLLR|RY 0.065 . TGME49_304680 392 GLDLLRR|YQ 0.101 . TGME49_304680 400 QCCIDLK|KS 0.054 . TGME49_304680 401 CCIDLKK|SV 0.158 . TGME49_304680 405 LKKSVLR|ID 0.098 . TGME49_304680 417 IPFLSEK|DI 0.099 . TGME49_304680 421 SEKDITK|GM 0.067 . TGME49_304680 426 TKGMFGR|AD 0.116 . TGME49_304680 445 TSSGEDK|KM 0.070 . TGME49_304680 446 SSGEDKK|MD 0.107 . TGME49_304680 469 ASPGPLR|QQ 0.076 . TGME49_304680 483 EPQDEAK|VQ 0.066 . TGME49_304680 494 VDLGFLR|TD 0.066 . ____________________________^_________________

  • Fasta :-

    >TGME49_304680 CCGCCCGCCGGCAGCCTCGCAGCTTTTCTGCATCCTTTCTGGTGTCTTCTCTTTCTCTTC CATCTCTCTGTTTGTGCTCTTACCTTCTCTCGTGTCTCGTCGTCGTCGGCTCTTCTCCTG GTCCTAACCTTTCTGTCTGTCTCTCTCCCGTTCTTCGGAGGCTGCTGCCATCGCAGTGTT CGTCCTTCGTCCCCGTGACGCCTTTTCTTTTCCGCGAAGGCCTGAGAAATTTCGTCGCGG CGTTCTCCAAGATGCAGATATCCATTGCAGACGACGATTCGGGCGTCGTCTTTTCTCTGG AAGTCAGCGCGGGGACAACCGTCGACGCGCTGAAGGCGCTCATCGAAGCGGAGACGCGCA TTCCTCCCAACGAGCAGCAACTCCTCGTGGACATGCAGCCGATAAGCAGAGATGCTGCGA CCGTGGGCGCCGCCGGCATTCCAGACGGGAGTATGATTCTCGTTCGACGTCTCCCGGAGG CGCCTGTTCCTGCGCTTGCTGCGTCTCCGCCCAGCGTGGGCTCCACGGACGCGGTCGCGC CTCCTGTCTCTGGAGCGAGCGGACGGAGCCGACAAGCGGGATCCACAGGTGGACGACGGG GACAACAAAGTCTGCAGTCGCTCTTTGACTTTTCGAACATTGTGGTGAAGGATGGAAAAG CCAAGGCGCAGACTCGGCAGCGAGAGACGACGCCGCGGCCGGCGAGGTCGGCAACTCACC ATGCATCTTCTGCGGAGAGGACGGAGGGCCGGGCAGGCACACCGCCTCTCTCCGACGACG AGTATCTCAAGCAACAAGCGCAGACGCTCATCAACGTCTGTGCTGCGCAGGAAGCCACTC TCAGTGTGTTAGCGCTGGAGAATCCGCCTCTGGGCGAGGTGCTGCGGCAGGCAGTGAAGG AGTCCAGAGAAGGCAGGGGCGAGACAGAAAGCTTCGGCAAACTCGTGGAGCACTTGCGAA AGCAACTCGAAGAAAGAAGAAAGGCAGAGGAGTCGCGACTGCAGCAGCTGAACTCTGCAC TGGCCAATCCGCTGTCGGCGGCGGCCCAGGCATTCATGATGAAGGAGATTCATGAGAAGC AAGTGGAGGACAACTACCTGCTCGCGCAAGAGCATTTGCCCGAAGCCTTTGGCTCCGTGT ACATGTTGTTCATCGACATCGAAGTGAACGGGGTGCCGATCAAGGCCTTCGTCGACAGCG GGGCGCAGAGCACCTTCATGTCTTACGCATGCGCGCAGAAGTGCAGTCTGCTGCGTCTGA TGGATACACGATACCGTGGCGTCGCTCAGGGCGTCGGAAAGACGGAAATCGTCGGGAAAA TTCACTTGGCGACGCTCAAGATCGGCCAGCGCTTCTTCCCCTCCAGCTTCACCGTCCTCC AGGACAACAAAGTCGAGTTCCTCTTCGGCCTCGACCTCCTGCGCAGATACCAGTGCTGCA TAGACCTGAAGAAAAGCGTTCTGCGCATCGACAACGAAGAAATCCCATTCTTGAGTGAAA AGGATATCACCAAGGGCATGTTCGGCCGCGCCGATACACCCAACAGTCTCGGTTCCCCCA CCGCAACTTCCTCAGGCGAAGACAAGAAAATGGACGTCGATTCTTCCTCCTCTTCTTCCT CTTCATCGTCCTCTTCCGCTTCGCCTGGGCCTCTCCGACAGCAGAGTACAACCAGCCTGG AGCCTCAAGATGAAGCCAAAGTTCAGCAACTCGTCGATCTCGGTTTTCTCCGCACAGACG CTGTGGACGCTCTCGCCATAGCAGGCGGCAATGTCGAGGCCGCTGCTACTTTCCTCTTTA ACCAGCAACAACATGACCAAGAAAACCTCTCTTGAGTACGCCAGTGTCACTGGAAATCCT CGTTATCACACTGTATCTTTCTGTATCTCCAGGTGGACGTCTTTACACAACCATGCACAC GTCAATGTGACAGTGTTCTATGCGTGCATCGGTACGATGCACTCCATTGATAACTGGTAC CCTCGTGTGTATGGGACAAATACATATATACAGATGTATATATGTCTTATATTCAAGGAT ATATGGATACATGTCTATATGCGTACACCACCCCGTTGATGATGTACTCAGCTTCGGCGT TTCGCGGAATAGACCCGATTATGACATCTCCTGTTTCCAGGAAACAGGGCATTTCCAAAG CCCTGATGCAGAACCTTCTGCTTCAGTATCGAGAACTCCGAGGAAATCCCATTTTTTCAA GCAGAATGTACATATCTGCATACATACATGTAGAGAGCCTTACGCATGTAGTGAGGTATC CCCATGCATACTCGAGCTGTTTTTAAGATCGTTTCGAAGCCCGCGTTGAGTGGTGGTCGC GATTCTGAACGTGGGCCTCTGCATTTCAAACCAAAATGTTTTCACATGAACAGAAACATA TACTCACACACATGTGTGCTTGTGTGTGCATATGGTCGACGCTCCTTTGTCGTGTGGTCC TGATTTCCCGATCACTTTTGCATCTTTAGCATAACTCGTCCAGACAGGGAAAATTGTTAA TCTCATGTTGCTGTTT
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  • Fasta :-

    MQISIADDDSGVVFSLEVSAGTTVDALKALIEAETRIPPNEQQLLVDMQPISRDAATVGA AGIPDGSMILVRRLPEAPVPALAASPPSVGSTDAVAPPVSGASGRSRQAGSTGGRRGQQS LQSLFDFSNIVVKDGKAKAQTRQRETTPRPARSATHHASSAERTEGRAGTPPLSDDEYLK QQAQTLINVCAAQEATLSVLALENPPLGEVLRQAVKESREGRGETESFGKLVEHLRKQLE ERRKAEESRLQQLNSALANPLSAAAQAFMMKEIHEKQVEDNYLLAQEHLPEAFGSVYMLF IDIEVNGVPIKAFVDSGAQSTFMSYACAQKCSLLRLMDTRYRGVAQGVGKTEIVGKIHLA TLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRYQCCIDLKKSVLRIDNEEIPFLSEKDIT KGMFGRADTPNSLGSPTATSSGEDKKMDVDSSSSSSSSSSSSASPGPLRQQSTTSLEPQD EAKVQQLVDLGFLRTDAVDALAIAGGNVEAAATFLFNQQQHDQENLS

  • title: catalytic motif
  • coordinates: D315,S316,G317
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_304680160 SHHASSAERT0.998unspTGME49_304680160 SHHASSAERT0.998unspTGME49_304680160 SHHASSAERT0.998unspTGME49_304680415 SIPFLSEKDI0.993unspTGME49_304680440 SPTATSSGED0.993unspTGME49_304680441 STATSSGEDK0.997unspTGME49_304680456 SSSSSSSSSS0.99unspTGME49_304680457 SSSSSSSSSS0.99unspTGME49_304680460 SSSSSSSSAS0.992unspTGME49_304680464 SSSSASPGPL0.994unspTGME49_30468088 SASPPSVGST0.99unspTGME49_304680147 TQRETTPRPA0.997unsp

TGME49_104680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India