TGME49_307780 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_307780OTHER0.9994970.0003320.000172
No Results

  • Fasta :-

    >TGME49_307780 MGMETSGDGERLSSAASRRAPLQQGARPDKWPQLPCMIPDLVVPETSKSIWEFRSPALPW DPIGPPGSGEAPKCFVDAKFLRSAVPAKIRERTAGWKRAPSCWDPSTSLEEYPAVDLSFS PGASGTLPELPSDSGSKQKQRVGRSGSNRTKTEAPETRDNDPAPVSLQRKGGLNRFADSH IGNTSQAPTGGGKKLYYADIGKADSNATGSATSEKAAGKANGGLSETSLKLLMDDRLLAY VDLEALLVEGRRGNQPVVVDLDAFLSRDVGSIVTPPGAPLCVAGIASAFSVIADNAVLLP KGTFLWELIYPQSESGWPLYNPQGLYYVKLFLRSRWCLVEIDDLIPCDPAHRPLAPLSSQ GKHELWPLLLTKAIWKAFQGEIALGMSEIPILEALSGRKEVAFPLTAGVIRHFLNKGFWA SVKIRPTEAQTFDRRHETETSQGSTDSHEDASVTFLVCNLSPENSTTQQVCLRSGAFSLK RDYLQLHKSSNVVQQRFRESQPTAKRVVPGGLSSTDFFFPEEEGESEEEYGGLFSVVSSD HPENRTELMTQRAKEESKRKAKELRKDDRGRIIICKPWGKLLKHLLGDALPHPLPDATLH DFLAEESRPNTLRQTDTEGTFRPPNGVGSLQDAHATKINRQNDVFGGPSGKVINRETTLP LS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_307780.fa Sequence name : TGME49_307780 Sequence length : 662 VALUES OF COMPUTED PARAMETERS Coef20 : 4.121 CoefTot : -0.250 ChDiff : -2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.818 1.853 0.424 0.671 MesoH : 0.161 0.771 -0.174 0.373 MuHd_075 : 16.556 10.184 4.207 2.954 MuHd_095 : 28.374 11.195 6.021 5.307 MuHd_100 : 37.241 13.883 8.525 6.653 MuHd_105 : 38.634 15.192 9.205 6.939 Hmax_075 : 1.200 2.400 -1.076 2.240 Hmax_095 : 10.675 3.850 0.897 2.546 Hmax_100 : 11.600 5.200 1.144 3.090 Hmax_105 : 10.733 6.883 1.626 3.792 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7539 0.2461 DFMC : 0.7793 0.2207
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 662 TGME49_307780 MGMETSGDGERLSSAASRRAPLQQGARPDKWPQLPCMIPDLVVPETSKSIWEFRSPALPWDPIGPPGSGEAPKCFVDAKF 80 LRSAVPAKIRERTAGWKRAPSCWDPSTSLEEYPAVDLSFSPGASGTLPELPSDSGSKQKQRVGRSGSNRTKTEAPETRDN 160 DPAPVSLQRKGGLNRFADSHIGNTSQAPTGGGKKLYYADIGKADSNATGSATSEKAAGKANGGLSETSLKLLMDDRLLAY 240 VDLEALLVEGRRGNQPVVVDLDAFLSRDVGSIVTPPGAPLCVAGIASAFSVIADNAVLLPKGTFLWELIYPQSESGWPLY 320 NPQGLYYVKLFLRSRWCLVEIDDLIPCDPAHRPLAPLSSQGKHELWPLLLTKAIWKAFQGEIALGMSEIPILEALSGRKE 400 VAFPLTAGVIRHFLNKGFWASVKIRPTEAQTFDRRHETETSQGSTDSHEDASVTFLVCNLSPENSTTQQVCLRSGAFSLK 480 RDYLQLHKSSNVVQQRFRESQPTAKRVVPGGLSSTDFFFPEEEGESEEEYGGLFSVVSSDHPENRTELMTQRAKEESKRK 560 AKELRKDDRGRIIICKPWGKLLKHLLGDALPHPLPDATLHDFLAEESRPNTLRQTDTEGTFRPPNGVGSLQDAHATKINR 640 QNDVFGGPSGKVINRETTLPLS 720 ................................................................................ 80 ...............................................................P................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_307780 11 TSGDGER|LS 0.087 . TGME49_307780 18 LSSAASR|RA 0.117 . TGME49_307780 19 SSAASRR|AP 0.240 . TGME49_307780 27 PLQQGAR|PD 0.071 . TGME49_307780 30 QGARPDK|WP 0.089 . TGME49_307780 48 VVPETSK|SI 0.068 . TGME49_307780 54 KSIWEFR|SP 0.098 . TGME49_307780 73 GSGEAPK|CF 0.072 . TGME49_307780 79 KCFVDAK|FL 0.083 . TGME49_307780 82 VDAKFLR|SA 0.195 . TGME49_307780 88 RSAVPAK|IR 0.075 . TGME49_307780 90 AVPAKIR|ER 0.083 . TGME49_307780 92 PAKIRER|TA 0.116 . TGME49_307780 97 ERTAGWK|RA 0.060 . TGME49_307780 98 RTAGWKR|AP 0.181 . TGME49_307780 137 PSDSGSK|QK 0.065 . TGME49_307780 139 DSGSKQK|QR 0.060 . TGME49_307780 141 GSKQKQR|VG 0.088 . TGME49_307780 144 QKQRVGR|SG 0.566 *ProP* TGME49_307780 149 GRSGSNR|TK 0.155 . TGME49_307780 151 SGSNRTK|TE 0.069 . TGME49_307780 158 TEAPETR|DN 0.175 . TGME49_307780 169 APVSLQR|KG 0.082 . TGME49_307780 170 PVSLQRK|GG 0.083 . TGME49_307780 175 RKGGLNR|FA 0.137 . TGME49_307780 193 APTGGGK|KL 0.061 . TGME49_307780 194 PTGGGKK|LY 0.075 . TGME49_307780 202 YYADIGK|AD 0.065 . TGME49_307780 215 GSATSEK|AA 0.120 . TGME49_307780 219 SEKAAGK|AN 0.074 . TGME49_307780 230 LSETSLK|LL 0.062 . TGME49_307780 236 KLLMDDR|LL 0.071 . TGME49_307780 251 ALLVEGR|RG 0.066 . TGME49_307780 252 LLVEGRR|GN 0.127 . TGME49_307780 267 LDAFLSR|DV 0.212 . TGME49_307780 301 NAVLLPK|GT 0.067 . TGME49_307780 329 QGLYYVK|LF 0.056 . TGME49_307780 333 YVKLFLR|SR 0.085 . TGME49_307780 335 KLFLRSR|WC 0.081 . TGME49_307780 352 PCDPAHR|PL 0.070 . TGME49_307780 362 PLSSQGK|HE 0.062 . TGME49_307780 372 WPLLLTK|AI 0.078 . TGME49_307780 376 LTKAIWK|AF 0.063 . TGME49_307780 398 LEALSGR|KE 0.080 . TGME49_307780 399 EALSGRK|EV 0.076 . TGME49_307780 411 LTAGVIR|HF 0.099 . TGME49_307780 416 IRHFLNK|GF 0.086 . TGME49_307780 423 GFWASVK|IR 0.062 . TGME49_307780 425 WASVKIR|PT 0.195 . TGME49_307780 434 EAQTFDR|RH 0.100 . TGME49_307780 435 AQTFDRR|HE 0.093 . TGME49_307780 473 TQQVCLR|SG 0.117 . TGME49_307780 480 SGAFSLK|RD 0.066 . TGME49_307780 481 GAFSLKR|DY 0.198 . TGME49_307780 488 DYLQLHK|SS 0.066 . TGME49_307780 496 SNVVQQR|FR 0.138 . TGME49_307780 498 VVQQRFR|ES 0.079 . TGME49_307780 505 ESQPTAK|RV 0.090 . TGME49_307780 506 SQPTAKR|VV 0.253 . TGME49_307780 545 SDHPENR|TE 0.092 . TGME49_307780 552 TELMTQR|AK 0.093 . TGME49_307780 554 LMTQRAK|EE 0.058 . TGME49_307780 558 RAKEESK|RK 0.062 . TGME49_307780 559 AKEESKR|KA 0.197 . TGME49_307780 560 KEESKRK|AK 0.080 . TGME49_307780 562 ESKRKAK|EL 0.183 . TGME49_307780 565 RKAKELR|KD 0.136 . TGME49_307780 566 KAKELRK|DD 0.080 . TGME49_307780 569 ELRKDDR|GR 0.092 . TGME49_307780 571 RKDDRGR|II 0.113 . TGME49_307780 576 GRIIICK|PW 0.092 . TGME49_307780 580 ICKPWGK|LL 0.064 . TGME49_307780 583 PWGKLLK|HL 0.057 . TGME49_307780 608 FLAEESR|PN 0.079 . TGME49_307780 613 SRPNTLR|QT 0.140 . TGME49_307780 622 DTEGTFR|PP 0.081 . TGME49_307780 637 QDAHATK|IN 0.071 . TGME49_307780 640 HATKINR|QN 0.088 . TGME49_307780 651 FGGPSGK|VI 0.062 . TGME49_307780 655 SGKVINR|ET 0.089 . ____________________________^_________________

  • Fasta :-

    >TGME49_307780 ATGGGGATGGAAACGTCTGGCGACGGAGAAAGGCTGTCTTCGGCGGCATCTCGTCGTGCT CCCCTCCAGCAAGGGGCACGCCCAGACAAATGGCCACAATTGCCCTGCATGATTCCCGAT CTTGTGGTCCCCGAAACCTCGAAAAGCATTTGGGAATTCCGATCGCCTGCCCTCCCATGG GATCCCATCGGTCCCCCTGGGAGTGGAGAAGCACCCAAATGTTTCGTCGACGCAAAATTT CTTCGCAGTGCAGTGCCGGCGAAGATAAGGGAACGGACAGCTGGCTGGAAGAGGGCACCA AGCTGCTGGGACCCTTCGACTTCACTCGAGGAGTACCCCGCTGTCGATCTTAGCTTTTCC CCTGGGGCGTCTGGCACATTGCCCGAACTGCCGAGCGATTCTGGCAGCAAACAAAAGCAA CGCGTTGGACGGTCGGGTAGCAATCGTACAAAAACTGAAGCTCCAGAAACGCGCGACAAC GACCCGGCACCTGTCTCGCTGCAGAGAAAGGGAGGATTAAACCGTTTTGCCGACAGCCAC ATCGGAAATACCTCGCAAGCTCCCACCGGAGGCGGCAAGAAACTGTATTACGCTGATATA GGCAAGGCGGATTCCAATGCAACCGGGTCTGCGACGTCAGAAAAGGCTGCGGGGAAGGCA AATGGTGGACTTTCGGAAACGTCTCTAAAGCTACTGATGGACGACCGCCTGTTGGCTTAT GTGGACCTGGAGGCCTTGCTTGTAGAAGGACGACGCGGTAATCAGCCAGTGGTTGTAGAC CTAGACGCCTTTCTCAGCCGCGATGTGGGGAGCATCGTGACACCACCAGGTGCGCCTCTA TGCGTTGCTGGGATAGCTTCTGCATTTAGCGTGATCGCCGACAACGCTGTCCTCCTTCCC AAGGGCACGTTTCTCTGGGAATTAATCTACCCACAGTCTGAATCTGGCTGGCCGTTGTAC AACCCTCAAGGCTTGTATTATGTTAAACTCTTCTTACGCTCGCGGTGGTGCTTGGTGGAG ATCGACGACCTCATACCCTGCGACCCAGCCCACAGGCCTCTAGCACCTCTGTCCTCTCAA GGCAAACACGAGCTTTGGCCGTTGCTGCTTACTAAGGCGATCTGGAAAGCATTCCAGGGA GAAATCGCGCTCGGCATGTCGGAAATTCCGATACTCGAGGCCCTAAGTGGAAGAAAAGAA GTCGCTTTTCCTCTGACAGCTGGAGTCATACGGCACTTTTTGAATAAAGGCTTTTGGGCT AGCGTCAAGATACGACCCACAGAGGCTCAGACTTTCGATCGGCGACACGAAACAGAAACT AGCCAGGGATCGACTGATAGCCATGAAGATGCGAGTGTCACATTTCTGGTTTGCAATTTG AGTCCTGAAAACTCGACAACCCAGCAAGTCTGTCTGCGGAGCGGAGCGTTCTCTTTAAAA CGAGATTATCTTCAGCTACACAAAAGTAGTAATGTCGTTCAACAGCGATTTCGTGAGTCC CAACCTACAGCGAAACGGGTCGTGCCCGGTGGGCTAAGCTCGACCGACTTTTTTTTTCCG GAGGAGGAGGGAGAATCCGAAGAGGAGTACGGCGGTTTGTTCTCTGTTGTCAGCTCGGAC CATCCAGAAAACAGAACGGAACTTATGACTCAGAGAGCCAAGGAAGAATCAAAGCGGAAG GCGAAGGAACTTCGAAAGGACGATCGCGGGCGCATCATCATATGCAAGCCATGGGGAAAG CTACTAAAACATTTACTTGGAGACGCCTTACCGCATCCTCTGCCTGACGCTACCTTGCAC GACTTTCTTGCCGAAGAGAGCAGACCGAACACATTGAGGCAGACAGACACCGAAGGCACA TTTAGACCGCCCAACGGAGTTGGGAGCCTCCAAGACGCCCACGCCACCAAGATTAACAGG CAAAATGACGTATTTGGAGGCCCCTCTGGCAAGGTAATCAACAGAGAAACGACACTCCCC CTCAGCTGA
  • Download Fasta

  • Fasta :-

    MGMETSGDGERLSSAASRRAPLQQGARPDKWPQLPCMIPDLVVPETSKSIWEFRSPALPW DPIGPPGSGEAPKCFVDAKFLRSAVPAKIRERTAGWKRAPSCWDPSTSLEEYPAVDLSFS PGASGTLPELPSDSGSKQKQRVGRSGSNRTKTEAPETRDNDPAPVSLQRKGGLNRFADSH IGNTSQAPTGGGKKLYYADIGKADSNATGSATSEKAAGKANGGLSETSLKLLMDDRLLAY VDLEALLVEGRRGNQPVVVDLDAFLSRDVGSIVTPPGAPLCVAGIASAFSVIADNAVLLP KGTFLWELIYPQSESGWPLYNPQGLYYVKLFLRSRWCLVEIDDLIPCDPAHRPLAPLSSQ GKHELWPLLLTKAIWKAFQGEIALGMSEIPILEALSGRKEVAFPLTAGVIRHFLNKGFWA SVKIRPTEAQTFDRRHETETSQGSTDSHEDASVTFLVCNLSPENSTTQQVCLRSGAFSLK RDYLQLHKSSNVVQQRFRESQPTAKRVVPGGLSSTDFFFPEEEGESEEEYGGLFSVVSSD HPENRTELMTQRAKEESKRKAKELRKDDRGRIIICKPWGKLLKHLLGDALPHPLPDATLH DFLAEESRPNTLRQTDTEGTFRPPNGVGSLQDAHATKINRQNDVFGGPSGKVINRETTLP LS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_307780478 SSGAFSLKRD0.996unspTGME49_307780478 SSGAFSLKRD0.996unspTGME49_307780478 SSGAFSLKRD0.996unspTGME49_307780526 SEEGESEEEY0.996unspTGME49_307780557 SAKEESKRKA0.993unspTGME49_307780611 TSRPNTLRQT0.991unspTGME49_307780213 SGSATSEKAA0.996unspTGME49_307780447 SGSTDSHEDA0.996unsp

TGME49_107780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India