TGME49_321530 | cathepsin CPL

_IDPredictionOTHERSPmTPCS_Position
TGME49_321530OTHER0.9999820.0000140.000004
No Results

  • Fasta :-

    >TGME49_321530 MDSSETHYVSFLNGEDDGLENGELHQRRGVRAGRPSPPFVVTTRTYFWKKFLRQRNFTAR AWIALVAAAVSLLVFASFLIQWQGEDDRAVFPPSPVEDHQPPANIWEWKEAHFQDAFSSF QAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGF KKSRNLKSHHLGVATELLNVLPSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEG AHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYLARDE ECRAQSCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCG TDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFP VM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_321530.fa Sequence name : TGME49_321530 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 2.784 CoefTot : 0.000 ChDiff : -7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.276 2.665 0.446 0.838 MesoH : -0.666 0.113 -0.394 0.211 MuHd_075 : 15.698 5.170 5.222 1.437 MuHd_095 : 19.276 7.143 3.813 2.382 MuHd_100 : 23.212 8.485 4.430 3.473 MuHd_105 : 19.015 7.326 3.133 3.547 Hmax_075 : 0.300 -1.983 -1.571 1.587 Hmax_095 : -2.712 0.800 -3.558 1.380 Hmax_100 : 4.500 2.500 -1.601 2.760 Hmax_105 : 6.000 -1.400 -1.811 2.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9995 0.0005 DFMC : 0.9991 0.0009
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 TGME49_321530 MDSSETHYVSFLNGEDDGLENGELHQRRGVRAGRPSPPFVVTTRTYFWKKFLRQRNFTARAWIALVAAAVSLLVFASFLI 80 QWQGEDDRAVFPPSPVEDHQPPANIWEWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSL 160 KMNHFGDLSRDEFRRKYLGFKKSRNLKSHHLGVATELLNVLPSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEG 240 AHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVP 320 RRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMY 400 MAMHKGEEGQCGLLLDASFPVM 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_321530 27 NGELHQR|RG 0.070 . TGME49_321530 28 GELHQRR|GV 0.406 . TGME49_321530 31 HQRRGVR|AG 0.275 . TGME49_321530 34 RGVRAGR|PS 0.202 . TGME49_321530 44 PFVVTTR|TY 0.084 . TGME49_321530 49 TRTYFWK|KF 0.074 . TGME49_321530 50 RTYFWKK|FL 0.139 . TGME49_321530 53 FWKKFLR|QR 0.075 . TGME49_321530 55 KKFLRQR|NF 0.081 . TGME49_321530 60 QRNFTAR|AW 0.175 . TGME49_321530 88 WQGEDDR|AV 0.100 . TGME49_321530 109 ANIWEWK|EA 0.083 . TGME49_321530 126 FQAMYAK|SY 0.098 . TGME49_321530 134 YATEEEK|QR 0.056 . TGME49_321530 136 TEEEKQR|RY 0.081 . TGME49_321530 137 EEEKQRR|YA 0.183 . TGME49_321530 142 RRYAIFK|NN 0.075 . TGME49_321530 161 GYSYSLK|MN 0.075 . TGME49_321530 170 HFGDLSR|DE 0.077 . TGME49_321530 174 LSRDEFR|RK 0.090 . TGME49_321530 175 SRDEFRR|KY 0.143 . TGME49_321530 176 RDEFRRK|YL 0.098 . TGME49_321530 181 RKYLGFK|KS 0.060 . TGME49_321530 182 KYLGFKK|SR 0.098 . TGME49_321530 184 LGFKKSR|NL 0.088 . TGME49_321530 187 KKSRNLK|SH 0.313 . TGME49_321530 212 PAGVDWR|SR 0.176 . TGME49_321530 214 GVDWRSR|GC 0.079 . TGME49_321530 221 GCVTPVK|DQ 0.071 . TGME49_321530 224 TPVKDQR|DC 0.133 . TGME49_321530 245 EGAHCAK|TG 0.061 . TGME49_321530 248 HCAKTGK|LV 0.096 . TGME49_321530 262 ELMDCSR|AE 0.093 . TGME49_321530 298 AYPYLAR|DE 0.092 . TGME49_321530 303 ARDEECR|AQ 0.092 . TGME49_321530 309 RAQSCEK|VV 0.068 . TGME49_321530 312 SCEKVVK|IL 0.070 . TGME49_321530 317 VKILGFK|DV 0.066 . TGME49_321530 321 GFKDVPR|RS 0.111 . TGME49_321530 322 FKDVPRR|SE 0.175 . TGME49_321530 328 RSEAAMK|AA 0.076 . TGME49_321530 333 MKAALAK|SP 0.082 . TGME49_321530 376 VGYGTDK|ES 0.058 . TGME49_321530 379 GTDKESK|KD 0.063 . TGME49_321530 380 TDKESKK|DF 0.153 . TGME49_321530 386 KDFWIMK|NS 0.067 . TGME49_321530 395 WGTGWGR|DG 0.096 . TGME49_321530 405 MYMAMHK|GE 0.067 . ____________________________^_________________

  • Fasta :-

    >TGME49_321530 ACGCGCTCGCGGTTCTCGTCCGCTTCCGCAAAAGTGGTTTTTCACTCGTGCTAGACGGCA TGTTTGGAGGAGGCGCGCGACGAGGCTGGGCGCGGCGCAGAAGCCGCGCATGTGCTAGGA CGACGAGTGGAAGGAAAGGTCCGCTTTTCGCGAAAAGAAGATCCGAGCCGGGCGCCTGAG CTAACGAGTTTCAGGCTCGCGTGTCGCTTGCGACCAGGCCGACGCGGCCGGCAGTCCTTC TCTGCTATAGTTTTGGCACCGAAAGCGAACTTTCTCGGACCGAGCGAGGCGGTCGTGTGG CCCTGACTTTGCCTGTTTCGGCGGAACGCGACAGGAGACGCGAGGTCGTCGAGGCTCGAA GGAAGCAACACGCCGTGACCGCTCGCGGGACTTTTTTGTGGCTTCTCGGCCGTTGTCGGC AAGCGTCATTCGCCGCAAAGCCCGCTGAGCTGTCTGTTTTCCGTCGGAACTGAGAAGAAA GCGACAGCATTCCGTTGTCAACCGCTGAACATTGGCTTTTTTCATCCTTACCCCGGAACC TGGACGTTCTTTTTGGCCCTCCCCGGCTCCCGAAAAAGAGCCTGCCCCCCAGCGGCGCGT CGGTTCGCGGGTTTCCCCCGTACTTTTCTTATTTCGCAGAGTTTTGACCGTTTGTCCCTC TTACCCCGCGGCCTCGCTCTCGAACACCATGGACAGCAGCGAGACGCACTACGTCTCCTT CCTCAACGGCGAGGACGACGGGCTGGAGAACGGCGAGCTTCACCAGCGACGAGGCGTCCG CGCTGGCCGGCCGAGTCCTCCGTTCGTTGTTACGACCCGCACGTACTTCTGGAAGAAATT TCTCCGTCAACGCAACTTCACAGCGCGGGCGTGGATCGCACTCGTGGCTGCGGCGGTGTC TCTCCTTGTCTTTGCCTCGTTCCTCATTCAGTGGCAGGGCGAAGACGACCGCGCGGTCTT CCCGCCGTCGCCAGTTGAGGACCACCAACCCCCCGCCAACATCTGGGAATGGAAAGAGGC GCACTTTCAGGACGCCTTCAGCAGCTTCCAAGCCATGTACGCCAAGAGCTACGCGACTGA GGAAGAAAAACAGAGGCGATACGCCATCTTCAAAAACAACCTCGTCTACATTCACACACA CAACCAACAAGGATATTCCTACTCCCTCAAGATGAATCACTTTGGAGACTTGTCGCGCGA CGAGTTCCGCCGGAAGTACCTCGGCTTCAAGAAGTCCCGCAACCTGAAGTCGCACCACCT TGGGGTGGCGACGGAGTTGCTGAATGTACTGCCAAGTGAACTGCCTGCTGGAGTGGACTG GCGCTCGCGCGGATGCGTGACGCCGGTGAAGGACCAGCGAGACTGCGGCTCTTGCTGGGC GTTCTCGACCACAGGGGCTCTCGAGGGCGCGCACTGCGCAAAGACGGGCAAGCTGGTGAG TTTGAGTGAGCAGGAGCTGATGGACTGCTCGCGAGCAGAGGGCAACCAGAGTTGCAGTGG CGGCGAGATGAACGACGCGTTTCAGTACGTCTTGGACAGCGGCGGGATCTGCTCGGAGGA TGCGTATCCGTACCTTGCCCGAGACGAGGAGTGTCGAGCGCAGAGCTGTGAGAAAGTCGT GAAGATCTTGGGCTTCAAGGACGTACCACGGAGAAGCGAGGCTGCGATGAAGGCCGCTCT CGCGAAGAGTCCAGTGAGCATCGCCATCGAAGCCGACCAGATGCCTTTCCAGTTCTACCA CGAGGGAGTCTTTGACGCGTCTTGTGGCACAGACCTCGACCACGGCGTCCTCCTCGTCGG ATACGGAACGGACAAAGAGTCGAAGAAGGACTTCTGGATCATGAAAAACTCCTGGGGCAC CGGCTGGGGCAGAGACGGATACATGTACATGGCCATGCACAAAGGCGAAGAGGGGCAGTG CGGCCTTCTCTTAGATGCGTCTTTCCCCGTGATGTGACGCGACCGTGGCTTTCGGGAAGT TCGTGGAAGGAAGTGAGAAGGAAGACGGAGGTTCTGGCTGGAGGAGCGACATGGAGGCGA CCAACGGGGGAGAGGAAAGAGAAGGAAAACGGCGGAGACAAGAGAAGCAGCCAGCGCAAA GAGGAGACGCATTGGATGTGAAGGGGGGAGAGGAGGGAGGGGAACATGTGGAGGTCTTCG CGTCGCGGGACTTCTCTCTCTGCAACCTTTGGACTTTTTAAGGGATCTGTCTCGCCTCGA ACTTCCCAGGTCAAGACGCGCCTCTAAGAGCGCATGTGCCTCGCGAGTCAGTCCACTGTA TGTACACCTGCGCGCGTCTTTAGCGCCTTTGGCGGATCGTGTTTCGGGGACCTTCGCTGC CCCGCCTGAAATGCTTGTGCTTCGTCTTCGTCAGTTGCATGCAGTTTTTATAGTGTTTGT GTATCATAGCTCCTTGCGAGAAATTGGAACTCCGGCGATGCGAACTCGACGCTGCAAGCC GTCGAACCGTGCAGATGCTTGTCGAGAGAGGCCTGTGCTTGAAAAGGCAGGCGAACTTCT CAGTCGTCCGGGTGTTCTGCAGAGCTTCTGAGTGTCGCGTTTTCCGAAAAAGGTCTGTGT CTTCGGTTTGGCTGAACTTTTGGTCTCCCGCGTCGTCTGCGTCCCTGTCGCTCGGCGGAA GAGAAGGCGCCACAGGGCGAGACGCAGAGAAGCACGGACACTCGAAGGTATTTTCCGGCG TTTCTCTCCTGCAACGAGAAGCTCCGTTATTGTCAGCTACGCCCTCATTTGAGGAAGACT CTTGAACAGCCAGCGTCGCTGAAGTACAAAAACACTCGCGGAACAGTTTCGAAGACTTTT GAAGATATTCGGGGACATAGCCGACTCTGAAGAAGATCCAAATAAACGCAGAGAGAACGC ACTGGGGAGGGGCTCTCTGCGCCGTTTTCGGAAAGAGTGGAACTTCAGTCCACGTTCTGG ACGCATGCAGAGGTCGCAACCTGCACTTTGGCTCGGCTTTGCCAGCTGCGTGTGACAGGC GACTCATGAAGGAGAACTTCTTTGTTCGCTTGAATGTACTTCGACACTCTTGAAGATGTG ACATTCTGTGACTACATTACAAAACTAACGGTCGCAAGGTGCGGGGATAACAGGTGAACT CATAATAATATTTACTTGTGCCCTTCGTCTCTTAGGTCTGCCCTCATCTTTGCCGAGGGT CTGTGCTGCGTCCGCTTTGGCGCACAAGAGGATTTCTCAACGGGAGCAAACTTCGTTGTC TGTGTGAGCGCGAGAAAGCCGTCTGTCCAGAGTTCCTCACATGCTGGACAGAAGCGTCTG CCGCCTTTACTGAAGCGCGAGCTGGTTCTCTCTTTGAACACAGCAGAGAGACGCAGGAGT CGTCTCTCTGCTGGGGCCCTCTTGGGGAAGTCTCGGCTCTCTGTGAATTTTTGAGTCCAA TGCCGAAAGCCTTCGTTCTGCGGCTTCTCATGGAAAGCAGAGTCTAGGTGTGAAGAAGCG GCTCGGTTCGAGAGAGTGCAAGGCGCCACTGGCAAAGCGCGTCGAACGTAGTGTCCTCTG TAGAGGTGTACGTACACTGCAGAGGAGGGAGGCGGCGCGTTGCGTCCGGGCAGGCGCGAA GCCAGTTTCGTCGGAGGGAAACGCGTCTGTGTTCGGGCGCTGCGCCGGAGCGTTTCTCTG GAACTCAGCGACGCTGGATTTCACAGGACTTGACAGACATCCCAGAGTTTTCAAGTCTGG AGGAGACGGGGGAGACACACGGGAGAGATAGAAAAGAGACGCCACGC
  • Download Fasta

  • Fasta :-

    MDSSETHYVSFLNGEDDGLENGELHQRRGVRAGRPSPPFVVTTRTYFWKKFLRQRNFTAR AWIALVAAAVSLLVFASFLIQWQGEDDRAVFPPSPVEDHQPPANIWEWKEAHFQDAFSSF QAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGF KKSRNLKSHHLGVATELLNVLPSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEG AHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYLARDE ECRAQSCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCG TDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFP VM

    No Results
  • title: active site
  • coordinates: Q223,C229,H365,N387
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_321530251 SGKLVSLSEQ0.994unspTGME49_321530251 SGKLVSLSEQ0.994unspTGME49_321530251 SGKLVSLSEQ0.994unspTGME49_321530378 STDKESKKDF0.997unspTGME49_3215308 YSETHYVSFL0.99unspTGME49_32153094 SVFPPSPVED0.992unsp

TGME49_121530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India