TGME49_323200 | OTU family cysteine protease

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TGME49_323200	OTHER	0.759828	0.066744	0.173428

No Results

Fasta :-
>TGME49_323200 MVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATL QGDICWTPSTASEEFDPESHSCADDAVIVSSFGSRVDAAELDLDRDADIVYDSAYEADNE EDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVASTQTGEDFSGDEWEIP EEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQPVCQSLSQLPRDMQA PPLEQSVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPE LSFYDAVVVERHRVAPDGNCQFRSVSYALLGTEDAHAEIRQEVAHYLRGNFNRLSWLINP DTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLGDARYRIWGDECTLAV MAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVV EKSNPGENVTCPSSTTSCVIQARLVVSHVRTIAKYRRQDCPPSSNQATDCLPRPLFKLRL LSGITTSWA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_323200.fa Sequence name : TGME49_323200 Sequence length : 549 VALUES OF COMPUTED PARAMETERS Coef20 : 4.801 CoefTot : 0.462 ChDiff : -35 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.600 1.406 0.119 0.585 MesoH : -0.790 0.231 -0.372 0.153 MuHd_075 : 26.027 16.004 7.482 4.796 MuHd_095 : 37.687 28.000 11.417 9.893 MuHd_100 : 36.242 25.173 10.777 9.245 MuHd_105 : 37.585 20.926 10.899 8.222 Hmax_075 : 14.000 20.883 6.405 4.650 Hmax_095 : 16.625 21.350 6.198 6.458 Hmax_100 : 18.000 21.700 6.460 6.900 Hmax_105 : 13.700 17.100 5.546 5.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1559 0.8441 DFMC : 0.3177 0.6823 This protein is probably imported in mitochondria. f(Ser) = 0.1538 f(Arg) = 0.0769 CMi = 0.86580 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 549 TGME49_323200 MVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATLQGDICWTPSTASEEFDPESH 80 SCADDAVIVSSFGSRVDAAELDLDRDADIVYDSAYEADNEEDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATT 160 NFVASTQTGEDFSGDEWEIPEEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQPVCQSLSQLPRDMQA 240 PPLEQSVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNC 320 QFRSVSYALLGTEDAHAEIRQEVAHYLRGNFNRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNW 400 VIRLGDARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVV 480 EKSNPGENVTCPSSTTSCVIQARLVVSHVRTIAKYRRQDCPPSSNQATDCLPRPLFKLRLLSGITTSWA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_323200 8 VLSSGWR|AL 0.084 . TGME49_323200 12 GWRALIR|CC 0.124 . TGME49_323200 28 NVSASDK|QE 0.061 . TGME49_323200 38 APSFVGR|VD 0.173 . TGME49_323200 51 NLESETK|VN 0.064 . TGME49_323200 55 ETKVNYR|VH 0.081 . TGME49_323200 95 VSSFGSR|VD 0.089 . TGME49_323200 105 AELDLDR|DA 0.111 . TGME49_323200 138 DADESPR|SS 0.122 . TGME49_323200 192 AEGMTTR|TP 0.086 . TGME49_323200 212 GDGNEEK|IF 0.065 . TGME49_323200 216 EEKIFGR|FA 0.112 . TGME49_323200 223 FAALHEK|EQ 0.058 . TGME49_323200 236 SLSQLPR|DM 0.118 . TGME49_323200 251 QSVQASK|LS 0.057 . TGME49_323200 255 ASKLSQR|SS 0.114 . TGME49_323200 259 SQRSSSR|PS 0.096 . TGME49_323200 263 SSRPSAK|LP 0.078 . TGME49_323200 280 PHPQWCR|RF 0.072 . TGME49_323200 281 HPQWCRR|FA 0.274 . TGME49_323200 287 RFAYDFK|TP 0.066 . TGME49_323200 291 DFKTPAK|SL 0.094 . TGME49_323200 311 DAVVVER|HR 0.075 . TGME49_323200 313 VVVERHR|VA 0.089 . TGME49_323200 323 DGNCQFR|SV 0.312 . TGME49_323200 340 DAHAEIR|QE 0.076 . TGME49_323200 348 EVAHYLR|GN 0.090 . TGME49_323200 353 LRGNFNR|LS 0.116 . TGME49_323200 369 LEEDEGR|MA 0.083 . TGME49_323200 372 DEGRMAR|LD 0.245 . TGME49_323200 375 RMARLDK|KY 0.130 . TGME49_323200 376 MARLDKK|YR 0.089 . TGME49_323200 378 RLDKKYR|VR 0.082 . TGME49_323200 380 DKKYRVR|IP 0.084 . TGME49_323200 384 RVRIPYK|TY 0.065 . TGME49_323200 387 IPYKTYK|GY 0.079 . TGME49_323200 397 LAEDELK|LN 0.062 . TGME49_323200 403 KLNWVIR|LG 0.106 . TGME49_323200 408 IRLGDAR|YR 0.100 . TGME49_323200 410 LGDARYR|IW 0.104 . TGME49_323200 428 AEMYNIR|IV 0.120 . TGME49_323200 439 QQEGDGR|RA 0.096 . TGME49_323200 440 QEGDGRR|AT 0.163 . TGME49_323200 443 DGRRATK|MG 0.201 . TGME49_323200 474 LIYDLQR|QH 0.093 . TGME49_323200 482 HYDVVEK|SN 0.078 . TGME49_323200 503 SCVIQAR|LV 0.130 . TGME49_323200 510 LVVSHVR|TI 0.101 . TGME49_323200 514 HVRTIAK|YR 0.067 . TGME49_323200 516 RTIAKYR|RQ 0.084 . TGME49_323200 517 TIAKYRR|QD 0.144 . TGME49_323200 533 ATDCLPR|PL 0.083 . TGME49_323200 537 LPRPLFK|LR 0.060 . TGME49_323200 539 RPLFKLR|LL 0.137 . ____________________________^_________________

Fasta :-
>TGME49_323200 ATGGTGCTCTCAAGTGGATGGCGTGCTCTGATACGCTGTTGTCAGCCGGTGCTCGCGACC CCTAACGTGAGTGCCTCTGACAAGCAAGAGCTTGCTCCCTCCTTCGTCGGCCGCGTCGAC GAAGAGGAACTAAACTTGGAGTCAGAGACCAAAGTAAACTACCGCGTCCATGCTACACTG CAAGGAGACATCTGCTGGACACCGAGTACGGCGAGCGAGGAGTTCGACCCGGAGTCCCAC TCTTGCGCTGACGATGCAGTCATTGTTTCGTCATTTGGGAGCCGAGTCGACGCCGCGGAA CTGGATCTGGACCGAGACGCTGACATCGTCTATGATTCTGCGTACGAAGCAGACAACGAA GAAGACGCGTGGTCAGAAACAGGGTCGGAAGAAGACGCGGACGAATCTCCTAGAAGTAGC GAGGTCTTGACTCAAGCTGACGAAGATGGCCAGAGTTTCGAAGGAGACCTTGCTACTACG AACTTCGTCGCGTCGACGCAGACAGGCGAAGACTTCTCTGGAGACGAATGGGAAATTCCT GAGGAGATTTCACCAGCAGAGGGGATGACGACGAGGACACCAACACCTCCAGGAGGATCA CCGGGAGATTGCTGCGGAGATGGAAATGAGGAAAAAATCTTCGGTCGATTCGCAGCCCTC CACGAGAAGGAGCAACCCGTGTGTCAATCTCTGAGTCAACTGCCCAGAGACATGCAGGCG CCTCCTTTGGAGCAGTCGGTTCAAGCGTCGAAGTTGTCGCAGCGGTCCTCCAGCCGACCT TCAGCCAAGCTACCACCGGAAATGTTGCCCTTCATCGCCCCTCATCCGCAATGGTGCCGT CGCTTCGCCTATGACTTCAAAACGCCAGCGAAGAGTCTGTCCATGGTGCCGCAACCCGAG CTGTCATTCTACGACGCGGTGGTTGTGGAGCGGCACCGGGTTGCTCCTGACGGAAATTGT CAATTCCGTTCCGTCAGCTACGCGTTGCTAGGCACAGAGGATGCCCATGCGGAAATCCGG CAAGAGGTGGCGCACTACCTGAGGGGCAACTTTAATCGGCTTAGCTGGCTGATAAACCCG GACACACTGGAGGAAGACGAGGGGAGAATGGCTCGACTCGACAAGAAATACAGAGTCAGA ATTCCGTACAAAACCTACAAAGGTTATCCCTTGGCAGAAGACGAGCTCAAACTTAATTGG GTTATCAGGCTTGGAGACGCACGATACAGGATCTGGGGTGACGAGTGCACTCTCGCTGTG ATGGCGGAGATGTACAACATCCGGATCGTTGTTGAGCAACAAGAAGGCGACGGGCGTCGG GCAACCAAAATGGGTTCGCATGCAGTCCAGGTTATCATACCATACGATGTGGTTCCTGAG GCATGCATCCCGACGATTTTCCTGATCTACGACCTTCAGCGTCAACACTACGACGTGGTC GAAAAGTCAAACCCAGGTGAAAACGTCACATGCCCTAGCTCAACAACCTCCTGCGTAATC CAAGCCCGACTGGTCGTCTCTCACGTCCGAACAATAGCCAAGTACCGTCGTCAAGACTGC CCTCCTTCGTCGAATCAAGCCACCGACTGTCTTCCTCGTCCTCTCTTCAAGTTGCGACTT CTTTCCGGAATAACTACAAGCTGGGCGTGA
Download Fasta

Fasta :-

MVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATL QGDICWTPSTASEEFDPESHSCADDAVIVSSFGSRVDAAELDLDRDADIVYDSAYEADNE EDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVASTQTGEDFSGDEWEIP EEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQPVCQSLSQLPRDMQA PPLEQSVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPE LSFYDAVVVERHRVAPDGNCQFRSVSYALLGTEDAHAEIRQEVAHYLRGNFNRLSWLINP DTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLGDARYRIWGDECTLAV MAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVV EKSNPGENVTCPSSTTSCVIQARLVVSHVRTIAKYRRQDCPPSSNQATDCLPRPLFKLRL LSGITTSWA

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TGME49_323200	129 S	SETGSEEDA	0.996	unsp	TGME49_323200	129 S	SETGSEEDA	0.996	unsp	TGME49_323200	129 S	SETGSEEDA	0.996	unsp	TGME49_323200	136 S	DADESPRSS	0.996	unsp	TGME49_323200	173 S	GEDFSGDEW	0.992	unsp	TGME49_323200	200 S	PPGGSPGDC	0.993	unsp	TGME49_323200	257 S	SQRSSSRPS	0.99	unsp	TGME49_323200	258 S	QRSSSRPSA	0.995	unsp	TGME49_323200	261 S	SSRPSAKLP	0.997	unsp	TGME49_323200	302 S	QPELSFYDA	0.993	unsp	TGME49_323200	72 S	PSTASEEFD	0.992	unsp	TGME49_323200	113 S	IVYDSAYEA	0.994	unsp

TGME49_323200 | OTU family cysteine protease

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TGME49_123200

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India