Tbg.972.2.1440 | chaperone protein ClpB1, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg.972.2.1440OTHER0.6557790.0002970.343924
No Results

  • Fasta :-

    >Tbg.972.2.1440 MRKLGSGGRGVWANSLTTKRTVQVGGYSAVSLLPSTTPLCNGLSTLFGVQRRFQSSVTPW GGQQGGGSGSNSNSNTQQQQGRAWVNPQAVPPGEFLNKYARNLTEEARMGRLDPIIGREE IIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGEVPESIKDKKVFSLDMGSL VAGAKFRGEFEERLKGVLKDTIESQGKVILFIDELHTLVGAGASGDGSMDAANLLKPSLA RGELHCVGATTLDEYKRHIEKDAALARRFQSVLVTEPTVEETISVLRGIKEKYEAHHGCL IKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAASRLRLQQESKPEQLDSVGRELVRLKI EAEAVKKDKDELGKAKLTQLYNRIEERQKEYDALEERWKKEKAMFDRIKKRTEDLDVLRH HYEQARAEGDFAKASEILHGRIPALKKEIDADKQATRTENFLTHDSVTADDIAQVIARAT GIPVAQLMTGEREKLITMDKELRQRVLGQDEAIATITNVVRISRAGLHAHKRPLGSFLFL GPTGVGKTEICKQLARFLFDDESFICRIDMSEYMERHAVHRLIGAPPGYVGYEEGGELTE SVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDFKNTIIILTSNIGADA IAALPEGCPSSKAMPSVMQQVRQRMTPEFINRLDDIVMFNRLGKAETRKIVDLLFAHVQS MLDDQEIKLEVSSDVFEWFGTNGYSPVYGARPLKRLVQSELLNRLAIMLLDGRIREKETV KVEMRDGEVFVHQNHDAVRPVDAADLGPQLTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/403 Sequence name : 403 Sequence length : 812 VALUES OF COMPUTED PARAMETERS Coef20 : 4.215 CoefTot : -4.683 ChDiff : -1 ZoneTo : 93 KR : 8 DE : 0 CleavSite : 84 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.629 0.229 0.610 MesoH : -0.271 0.206 -0.330 0.157 MuHd_075 : 38.462 20.137 9.445 8.628 MuHd_095 : 26.990 19.647 7.456 7.078 MuHd_100 : 27.465 23.488 6.932 7.400 MuHd_105 : 29.464 25.838 7.640 7.917 Hmax_075 : 13.300 9.500 1.184 4.490 Hmax_095 : 15.100 12.900 2.569 5.050 Hmax_100 : 4.800 19.800 -0.392 5.230 Hmax_105 : 11.100 21.000 3.707 7.093 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0966 0.9034 DFMC : 0.1635 0.8365 This protein is probably imported in mitochondria. f(Ser) = 0.1290 f(Arg) = 0.0645 CMi = 0.80483 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 812 Tbg.972.2.1440 MRKLGSGGRGVWANSLTTKRTVQVGGYSAVSLLPSTTPLCNGLSTLFGVQRRFQSSVTPWGGQQGGGSGSNSNSNTQQQQ 80 GRAWVNPQAVPPGEFLNKYARNLTEEARMGRLDPIIGREEIIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVS 160 GEVPESIKDKKVFSLDMGSLVAGAKFRGEFEERLKGVLKDTIESQGKVILFIDELHTLVGAGASGDGSMDAANLLKPSLA 240 RGELHCVGATTLDEYKRHIEKDAALARRFQSVLVTEPTVEETISVLRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSER 320 RLPDKAIDLIDEAASRLRLQQESKPEQLDSVGRELVRLKIEAEAVKKDKDELGKAKLTQLYNRIEERQKEYDALEERWKK 400 EKAMFDRIKKRTEDLDVLRHHYEQARAEGDFAKASEILHGRIPALKKEIDADKQATRTENFLTHDSVTADDIAQVIARAT 480 GIPVAQLMTGEREKLITMDKELRQRVLGQDEAIATITNVVRISRAGLHAHKRPLGSFLFLGPTGVGKTEICKQLARFLFD 560 DESFICRIDMSEYMERHAVHRLIGAPPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHG 640 RRVDFKNTIIILTSNIGADAIAALPEGCPSSKAMPSVMQQVRQRMTPEFINRLDDIVMFNRLGKAETRKIVDLLFAHVQS 720 MLDDQEIKLEVSSDVFEWFGTNGYSPVYGARPLKRLVQSELLNRLAIMLLDGRIREKETVKVEMRDGEVFVHQNHDAVRP 800 VDAADLGPQLTE 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ............ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg.972.2.1440 2 -----MR|KL 0.146 . Tbg.972.2.1440 3 ----MRK|LG 0.091 . Tbg.972.2.1440 9 KLGSGGR|GV 0.120 . Tbg.972.2.1440 19 ANSLTTK|RT 0.081 . Tbg.972.2.1440 20 NSLTTKR|TV 0.251 . Tbg.972.2.1440 51 TLFGVQR|RF 0.082 . Tbg.972.2.1440 52 LFGVQRR|FQ 0.204 . Tbg.972.2.1440 82 TQQQQGR|AW 0.105 . Tbg.972.2.1440 98 PGEFLNK|YA 0.069 . Tbg.972.2.1440 101 FLNKYAR|NL 0.112 . Tbg.972.2.1440 108 NLTEEAR|MG 0.072 . Tbg.972.2.1440 111 EEARMGR|LD 0.190 . Tbg.972.2.1440 118 LDPIIGR|EE 0.070 . Tbg.972.2.1440 123 GREEIIR|RT 0.106 . Tbg.972.2.1440 124 REEIIRR|TI 0.099 . Tbg.972.2.1440 131 TIQVLSR|RT 0.080 . Tbg.972.2.1440 132 IQVLSRR|TK 0.094 . Tbg.972.2.1440 134 VLSRRTK|NN 0.127 . Tbg.972.2.1440 147 GEPGVGK|TA 0.067 . Tbg.972.2.1440 157 VEGLAQR|IV 0.126 . Tbg.972.2.1440 168 EVPESIK|DK 0.057 . Tbg.972.2.1440 170 PESIKDK|KV 0.102 . Tbg.972.2.1440 171 ESIKDKK|VF 0.098 . Tbg.972.2.1440 185 SLVAGAK|FR 0.074 . Tbg.972.2.1440 187 VAGAKFR|GE 0.102 . Tbg.972.2.1440 193 RGEFEER|LK 0.092 . Tbg.972.2.1440 195 EFEERLK|GV 0.063 . Tbg.972.2.1440 199 RLKGVLK|DT 0.081 . Tbg.972.2.1440 207 TIESQGK|VI 0.060 . Tbg.972.2.1440 236 DAANLLK|PS 0.059 . Tbg.972.2.1440 241 LKPSLAR|GE 0.085 . Tbg.972.2.1440 256 TTLDEYK|RH 0.056 . Tbg.972.2.1440 257 TLDEYKR|HI 0.202 . Tbg.972.2.1440 261 YKRHIEK|DA 0.080 . Tbg.972.2.1440 267 KDAALAR|RF 0.106 . Tbg.972.2.1440 268 DAALARR|FQ 0.157 . Tbg.972.2.1440 287 ETISVLR|GI 0.088 . Tbg.972.2.1440 290 SVLRGIK|EK 0.096 . Tbg.972.2.1440 292 LRGIKEK|YE 0.077 . Tbg.972.2.1440 302 HHGCLIK|DE 0.067 . Tbg.972.2.1440 315 AAVNSHR|YL 0.101 . Tbg.972.2.1440 320 HRYLSER|RL 0.097 . Tbg.972.2.1440 321 RYLSERR|LP 0.112 . Tbg.972.2.1440 325 ERRLPDK|AI 0.079 . Tbg.972.2.1440 336 IDEAASR|LR 0.073 . Tbg.972.2.1440 338 EAASRLR|LQ 0.077 . Tbg.972.2.1440 344 RLQQESK|PE 0.057 . Tbg.972.2.1440 353 QLDSVGR|EL 0.073 . Tbg.972.2.1440 357 VGRELVR|LK 0.083 . Tbg.972.2.1440 359 RELVRLK|IE 0.056 . Tbg.972.2.1440 366 IEAEAVK|KD 0.062 . Tbg.972.2.1440 367 EAEAVKK|DK 0.122 . Tbg.972.2.1440 369 EAVKKDK|DE 0.068 . Tbg.972.2.1440 374 DKDELGK|AK 0.062 . Tbg.972.2.1440 376 DELGKAK|LT 0.063 . Tbg.972.2.1440 383 LTQLYNR|IE 0.083 . Tbg.972.2.1440 387 YNRIEER|QK 0.086 . Tbg.972.2.1440 389 RIEERQK|EY 0.066 . Tbg.972.2.1440 397 YDALEER|WK 0.075 . Tbg.972.2.1440 399 ALEERWK|KE 0.061 . Tbg.972.2.1440 400 LEERWKK|EK 0.194 . Tbg.972.2.1440 402 ERWKKEK|AM 0.073 . Tbg.972.2.1440 407 EKAMFDR|IK 0.104 . Tbg.972.2.1440 409 AMFDRIK|KR 0.065 . Tbg.972.2.1440 410 MFDRIKK|RT 0.210 . Tbg.972.2.1440 411 FDRIKKR|TE 0.150 . Tbg.972.2.1440 419 EDLDVLR|HH 0.078 . Tbg.972.2.1440 426 HHYEQAR|AE 0.115 . Tbg.972.2.1440 433 AEGDFAK|AS 0.076 . Tbg.972.2.1440 441 SEILHGR|IP 0.072 . Tbg.972.2.1440 446 GRIPALK|KE 0.068 . Tbg.972.2.1440 447 RIPALKK|EI 0.101 . Tbg.972.2.1440 453 KEIDADK|QA 0.071 . Tbg.972.2.1440 457 ADKQATR|TE 0.076 . Tbg.972.2.1440 478 IAQVIAR|AT 0.148 . Tbg.972.2.1440 492 QLMTGER|EK 0.071 . Tbg.972.2.1440 494 MTGEREK|LI 0.060 . Tbg.972.2.1440 500 KLITMDK|EL 0.062 . Tbg.972.2.1440 503 TMDKELR|QR 0.075 . Tbg.972.2.1440 505 DKELRQR|VL 0.099 . Tbg.972.2.1440 521 TITNVVR|IS 0.119 . Tbg.972.2.1440 524 NVVRISR|AG 0.153 . Tbg.972.2.1440 531 AGLHAHK|RP 0.053 . Tbg.972.2.1440 532 GLHAHKR|PL 0.306 . Tbg.972.2.1440 547 GPTGVGK|TE 0.062 . Tbg.972.2.1440 552 GKTEICK|QL 0.062 . Tbg.972.2.1440 556 ICKQLAR|FL 0.113 . Tbg.972.2.1440 567 DESFICR|ID 0.085 . Tbg.972.2.1440 576 MSEYMER|HA 0.101 . Tbg.972.2.1440 581 ERHAVHR|LI 0.151 . Tbg.972.2.1440 603 ELTESVR|RR 0.066 . Tbg.972.2.1440 604 LTESVRR|RP 0.097 . Tbg.972.2.1440 605 TESVRRR|PY 0.304 . Tbg.972.2.1440 617 LFDEFEK|AH 0.056 . Tbg.972.2.1440 641 LTDSHGR|RV 0.112 . Tbg.972.2.1440 642 TDSHGRR|VD 0.184 . Tbg.972.2.1440 646 GRRVDFK|NT 0.098 . Tbg.972.2.1440 672 EGCPSSK|AM 0.066 . Tbg.972.2.1440 682 SVMQQVR|QR 0.093 . Tbg.972.2.1440 684 MQQVRQR|MT 0.103 . Tbg.972.2.1440 692 TPEFINR|LD 0.103 . Tbg.972.2.1440 701 DIVMFNR|LG 0.073 . Tbg.972.2.1440 704 MFNRLGK|AE 0.150 . Tbg.972.2.1440 708 LGKAETR|KI 0.099 . Tbg.972.2.1440 709 GKAETRK|IV 0.134 . Tbg.972.2.1440 728 LDDQEIK|LE 0.054 . Tbg.972.2.1440 751 SPVYGAR|PL 0.102 . Tbg.972.2.1440 754 YGARPLK|RL 0.129 . Tbg.972.2.1440 755 GARPLKR|LV 0.287 . Tbg.972.2.1440 764 QSELLNR|LA 0.084 . Tbg.972.2.1440 773 IMLLDGR|IR 0.068 . Tbg.972.2.1440 775 LLDGRIR|EK 0.089 . Tbg.972.2.1440 777 DGRIREK|ET 0.069 . Tbg.972.2.1440 781 REKETVK|VE 0.058 . Tbg.972.2.1440 785 TVKVEMR|DG 0.120 . Tbg.972.2.1440 799 QNHDAVR|PV 0.175 . ____________________________^_________________

  • Fasta :-

    >Tbg.972.2.1440 ATGCGAAAGCTGGGTTCGGGTGGCCGTGGTGTGTGGGCAAACAGCTTGACGACAAAACGT ACCGTGCAGGTCGGGGGCTATTCGGCTGTTTCGCTACTACCTTCTACAACCCCTTTGTGT AATGGGTTAAGTACCTTGTTTGGTGTGCAACGGCGCTTTCAGTCCAGTGTTACGCCATGG GGTGGTCAACAAGGTGGGGGGAGTGGCAGCAACAGCAACAGTAACACTCAACAGCAACAG GGCCGGGCATGGGTAAACCCACAGGCAGTGCCCCCTGGTGAGTTTCTAAACAAATATGCC CGCAATTTGACGGAAGAGGCTCGCATGGGACGCCTGGACCCCATTATTGGCAGAGAGGAA ATTATCCGCCGTACCATTCAAGTATTGAGTCGCCGAACGAAAAATAACCCCGTTCTTATC GGAGAACCTGGCGTTGGGAAGACAGCCATTGTGGAAGGATTGGCCCAACGTATTGTCAGT GGCGAAGTACCGGAGAGTATCAAGGATAAGAAAGTGTTCTCGCTAGACATGGGCTCTTTA GTTGCTGGTGCGAAGTTCCGTGGTGAGTTTGAGGAGCGGCTGAAGGGTGTGCTAAAGGAC ACAATTGAGTCGCAGGGGAAAGTTATTCTTTTCATTGACGAGTTGCACACCCTCGTTGGG GCGGGGGCATCCGGTGACGGATCCATGGACGCGGCGAACCTCCTGAAGCCTTCACTCGCC CGTGGTGAGCTTCATTGCGTCGGTGCCACCACTTTGGATGAATACAAGCGTCACATCGAG AAGGATGCCGCTCTAGCTCGCCGCTTTCAGTCTGTCCTCGTGACTGAGCCCACGGTTGAG GAAACCATCTCCGTGCTACGTGGCATTAAGGAAAAATATGAGGCCCACCATGGGTGTCTC ATTAAGGACGAGGCCCTCGTTTACGCAGCGGTTAATTCCCATCGATACCTCTCAGAGAGG CGGCTACCCGACAAGGCTATCGACCTTATCGACGAGGCAGCAAGTCGGCTGCGACTTCAG CAGGAGTCCAAACCGGAGCAGCTTGATAGCGTGGGACGTGAGCTTGTCCGCCTAAAGATT GAAGCTGAAGCAGTGAAGAAAGATAAGGATGAGCTGGGAAAGGCGAAACTGACGCAGCTC TACAACCGCATTGAGGAGAGGCAGAAGGAGTATGATGCATTGGAAGAGCGCTGGAAGAAG GAGAAGGCCATGTTCGACCGCATCAAGAAACGAACGGAGGACTTGGATGTTCTTCGCCAC CACTACGAGCAGGCGCGAGCGGAGGGTGATTTTGCCAAGGCATCCGAAATATTGCATGGA AGGATACCTGCTCTGAAGAAAGAAATTGATGCGGATAAGCAGGCAACTCGCACTGAAAAC TTCCTTACGCATGACTCCGTTACCGCTGATGACATTGCTCAGGTCATTGCCCGTGCCACT GGCATTCCCGTTGCACAACTTATGACAGGTGAGAGGGAGAAGCTCATCACCATGGACAAG GAGCTTCGTCAGAGGGTTCTTGGCCAAGACGAGGCGATTGCCACTATTACCAACGTTGTG CGCATTTCTCGTGCTGGCCTCCACGCACACAAGCGTCCACTTGGCTCCTTCCTATTTCTT GGCCCAACTGGTGTGGGAAAAACCGAGATATGCAAACAACTGGCGAGGTTTCTATTCGAT GATGAATCTTTCATATGCCGCATTGATATGAGCGAGTACATGGAACGACATGCGGTTCAC CGTCTTATTGGAGCACCCCCGGGATATGTTGGCTATGAAGAAGGTGGTGAACTCACCGAG TCGGTGCGACGCCGCCCGTACCAAATTGTCCTTTTTGATGAGTTCGAGAAGGCGCACCCG AGTGTATCGAATATCCTCCTTCAAGTCCTTGACGAAGGTCACCTTACGGACAGTCATGGC CGGCGTGTGGATTTCAAGAACACTATCATTATTCTCACGTCAAACATTGGAGCTGACGCC ATTGCTGCGCTGCCAGAGGGTTGTCCATCCTCGAAGGCGATGCCATCTGTCATGCAGCAG GTGAGACAGCGCATGACACCAGAGTTTATCAACCGCTTGGATGATATTGTTATGTTCAAT CGACTTGGCAAGGCTGAGACTCGAAAGATTGTTGATCTCCTCTTTGCACATGTACAGTCA ATGTTGGACGACCAGGAGATTAAGCTGGAGGTGAGCTCTGATGTGTTTGAATGGTTTGGG ACGAATGGTTACAGCCCAGTCTACGGCGCTCGCCCACTTAAGCGGCTCGTACAGTCCGAA TTATTAAACCGGTTGGCGATTATGCTGTTGGACGGTCGGATTCGGGAGAAGGAAACCGTG AAGGTGGAAATGCGTGATGGAGAGGTATTTGTGCATCAGAACCATGACGCCGTGCGCCCA GTGGATGCCGCAGACCTGGGTCCGCAACTCACAGAATGA
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  • Fasta :-

    MRKLGSGGRGVWANSLTTKRTVQVGGYSAVSLLPSTTPLCNGLSTLFGVQRRFQSSVTPW GGQQGGGSGSNSNSNTQQQQGRAWVNPQAVPPGEFLNKYARNLTEEARMGRLDPIIGREE IIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGEVPESIKDKKVFSLDMGSL VAGAKFRGEFEERLKGVLKDTIESQGKVILFIDELHTLVGAGASGDGSMDAANLLKPSLA RGELHCVGATTLDEYKRHIEKDAALARRFQSVLVTEPTVEETISVLRGIKEKYEAHHGCL IKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAASRLRLQQESKPEQLDSVGRELVRLKI EAEAVKKDKDELGKAKLTQLYNRIEERQKEYDALEERWKKEKAMFDRIKKRTEDLDVLRH HYEQARAEGDFAKASEILHGRIPALKKEIDADKQATRTENFLTHDSVTADDIAQVIARAT GIPVAQLMTGEREKLITMDKELRQRVLGQDEAIATITNVVRISRAGLHAHKRPLGSFLFL GPTGVGKTEICKQLARFLFDDESFICRIDMSEYMERHAVHRLIGAPPGYVGYEEGGELTE SVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDFKNTIIILTSNIGADA IAALPEGCPSSKAMPSVMQQVRQRMTPEFINRLDDIVMFNRLGKAETRKIVDLLFAHVQS MLDDQEIKLEVSSDVFEWFGTNGYSPVYGARPLKRLVQSELLNRLAIMLLDGRIREKETV KVEMRDGEVFVHQNHDAVRPVDAADLGPQLTE

    No Results
  • title: ATP binding site
  • coordinates: E142,P143,G144,V145,G146,K147,T148,A149,D213,T251
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg.972.2.1440318 SHRYLSERRL0.997unspTbg.972.2.1440318 SHRYLSERRL0.997unspTbg.972.2.1440318 SHRYLSERRL0.997unspTbg.972.2.1440160 SQRIVSGEVP0.993unspTbg.972.2.1440166 SEVPESIKDK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India