Tbg972.10.1360 | serine peptidase, Clan SC, Family S10

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.1360SP0.0446500.9538360.001514CS pos: 23-24. VLA-NT. Pr: 0.9117
No Results

  • Fasta :-

    >Tbg972.10.1360 MRLISYPVMLSLLAACILVVVLANTVYRSLSLALRTTGSGWEPCDPGVDQWSGYFDIPGE QSDKHYFYWAFGPRDGNPNAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYS WNNHAYVIYIDQPAGVGFSYADKADYDKNEAEVSEDMYNFLQAFFGEHEDLRENDFFVVG ESYGGHFAPATAYRINQGNKKGEGIYIPLAGLAVGNGLTDPYTQYASYPRLAWDWCKEVL GSPCVSRETYDSMNSMVPACQKVINACNAGASSSQYLCKLSRVTCDPVTNLFTLTKISTY DIRRKCNATLCYKFDAIPAFMNRENVQKSLGVRPTVWKSCVFDANKMFNIDWSKNFNYTI SGLLEDGVRVMIYAGDMDFICNWIGNKEWTLALQWSGSEEFVKAPDTPFSSIDGSAAGLV RSVSSNTSSMHFSFVQVYRAGHMVPMDQPAAASTIIEKFMRNEPLS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/81 Sequence name : 81 Sequence length : 466 VALUES OF COMPUTED PARAMETERS Coef20 : 4.933 CoefTot : 1.426 ChDiff : -13 ZoneTo : 41 KR : 3 DE : 0 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.241 2.806 0.538 0.825 MesoH : -0.143 0.277 -0.274 0.262 MuHd_075 : 22.411 22.070 7.025 6.716 MuHd_095 : 35.912 24.356 9.070 8.990 MuHd_100 : 36.806 24.063 9.101 8.970 MuHd_105 : 33.245 20.591 8.054 8.283 Hmax_075 : 20.600 28.400 5.346 8.300 Hmax_095 : 14.350 15.838 2.801 5.311 Hmax_100 : 15.400 18.500 3.041 5.590 Hmax_105 : 13.800 18.700 2.934 5.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4662 0.5338 DFMC : 0.5226 0.4774
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 466 Tbg972.10.1360 MRLISYPVMLSLLAACILVVVLANTVYRSLSLALRTTGSGWEPCDPGVDQWSGYFDIPGEQSDKHYFYWAFGPRDGNPNA 80 PVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNHAYVIYIDQPAGVGFSYADKADYDKNEAEVSEDMYNF 160 LQAFFGEHEDLRENDFFVVGESYGGHFAPATAYRINQGNKKGEGIYIPLAGLAVGNGLTDPYTQYASYPRLAWDWCKEVL 240 GSPCVSRETYDSMNSMVPACQKVINACNAGASSSQYLCKLSRVTCDPVTNLFTLTKISTYDIRRKCNATLCYKFDAIPAF 320 MNRENVQKSLGVRPTVWKSCVFDANKMFNIDWSKNFNYTISGLLEDGVRVMIYAGDMDFICNWIGNKEWTLALQWSGSEE 400 FVKAPDTPFSSIDGSAAGLVRSVSSNTSSMHFSFVQVYRAGHMVPMDQPAAASTIIEKFMRNEPLS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.1360 2 -----MR|LI 0.095 . Tbg972.10.1360 28 LANTVYR|SL 0.234 . Tbg972.10.1360 35 SLSLALR|TT 0.109 . Tbg972.10.1360 64 PGEQSDK|HY 0.060 . Tbg972.10.1360 74 YWAFGPR|DG 0.101 . Tbg972.10.1360 143 GFSYADK|AD 0.073 . Tbg972.10.1360 148 DKADYDK|NE 0.058 . Tbg972.10.1360 172 GEHEDLR|EN 0.084 . Tbg972.10.1360 194 APATAYR|IN 0.106 . Tbg972.10.1360 200 RINQGNK|KG 0.064 . Tbg972.10.1360 201 INQGNKK|GE 0.130 . Tbg972.10.1360 230 QYASYPR|LA 0.092 . Tbg972.10.1360 237 LAWDWCK|EV 0.073 . Tbg972.10.1360 247 GSPCVSR|ET 0.131 . Tbg972.10.1360 262 MVPACQK|VI 0.062 . Tbg972.10.1360 279 SSQYLCK|LS 0.065 . Tbg972.10.1360 282 YLCKLSR|VT 0.083 . Tbg972.10.1360 296 NLFTLTK|IS 0.058 . Tbg972.10.1360 303 ISTYDIR|RK 0.077 . Tbg972.10.1360 304 STYDIRR|KC 0.113 . Tbg972.10.1360 305 TYDIRRK|CN 0.072 . Tbg972.10.1360 313 NATLCYK|FD 0.054 . Tbg972.10.1360 323 IPAFMNR|EN 0.095 . Tbg972.10.1360 328 NRENVQK|SL 0.107 . Tbg972.10.1360 333 QKSLGVR|PT 0.092 . Tbg972.10.1360 338 VRPTVWK|SC 0.069 . Tbg972.10.1360 346 CVFDANK|MF 0.053 . Tbg972.10.1360 354 FNIDWSK|NF 0.058 . Tbg972.10.1360 369 LLEDGVR|VM 0.076 . Tbg972.10.1360 387 CNWIGNK|EW 0.060 . Tbg972.10.1360 403 GSEEFVK|AP 0.070 . Tbg972.10.1360 421 SAAGLVR|SV 0.261 . Tbg972.10.1360 439 SFVQVYR|AG 0.110 . Tbg972.10.1360 458 ASTIIEK|FM 0.062 . Tbg972.10.1360 461 IIEKFMR|NE 0.080 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.1360 ATGCGGCTCATTTCGTATCCGGTAATGCTATCGTTACTGGCTGCTTGCATCCTGGTCGTA GTTTTAGCAAATACTGTCTATCGTAGTTTATCTCTAGCGCTTCGCACGACGGGCTCTGGT TGGGAGCCTTGTGACCCCGGCGTTGATCAATGGAGCGGATATTTTGATATTCCTGGAGAG CAGAGTGACAAACATTACTTCTACTGGGCATTTGGACCACGTGATGGCAATCCCAATGCC CCAGTGCTCCTGTGGATGACAGGTGGTCCTGGATGTAGTTCCATGTTTGCGCTACTTGCA GAGAATGGACCTTGCCTCATGAACGAAACGACTGGTGACATATACAACAATACGTACTCG TGGAACAACCACGCGTATGTAATATATATCGATCAACCTGCCGGTGTGGGCTTTTCGTAT GCGGATAAAGCGGATTATGATAAGAATGAAGCGGAGGTATCGGAGGACATGTACAACTTT CTACAGGCCTTCTTTGGTGAGCACGAGGACCTGCGTGAAAACGACTTCTTTGTTGTTGGG GAAAGCTACGGTGGCCACTTTGCTCCGGCTACAGCTTACCGCATTAACCAAGGCAATAAA AAGGGTGAAGGCATATACATTCCTCTTGCAGGATTGGCTGTAGGAAACGGTTTAACAGAT CCGTATACACAATATGCGTCATATCCCAGACTTGCATGGGACTGGTGCAAGGAAGTTCTT GGAAGTCCGTGTGTATCCCGCGAGACATATGACTCCATGAACAGTATGGTGCCCGCTTGC CAGAAAGTGATCAACGCGTGCAACGCTGGCGCTTCATCATCGCAGTATTTGTGTAAGTTG TCTCGTGTGACATGCGATCCTGTGACTAATCTTTTCACATTGACAAAAATAAGTACTTAT GATATCCGAAGAAAATGCAACGCAACACTTTGCTACAAATTTGATGCCATACCCGCTTTT ATGAACCGTGAGAATGTTCAGAAGTCACTTGGTGTCCGCCCTACTGTTTGGAAATCTTGC GTTTTTGATGCTAACAAAATGTTCAACATTGACTGGTCTAAGAACTTTAACTACACAATT AGTGGACTCCTCGAAGATGGAGTTCGAGTAATGATTTATGCCGGTGATATGGACTTTATC TGCAACTGGATTGGAAATAAGGAGTGGACACTTGCACTTCAGTGGTCTGGAAGTGAAGAG TTTGTGAAGGCCCCTGATACCCCATTCTCATCTATTGATGGTAGTGCTGCGGGTCTTGTA CGTAGCGTATCATCAAACACATCGTCAATGCACTTCAGTTTTGTGCAGGTGTACCGTGCG GGTCACATGGTGCCGATGGATCAACCTGCTGCGGCATCCACTATAATTGAGAAATTCATG AGGAACGAACCACTCTCGTAA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.1360298 SLTKISTYDI0.996unspTbg972.10.1360410 SDTPFSSIDG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India