Tbg972.10.1400 | serine carboxypeptidase III precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004185      

  • Computed_GO_Functions:  serine-type carboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.1400SP0.0003340.9995850.000080CS pos: 21-22. ASA-LQ. Pr: 0.7869
No Results

  • Fasta :-

    >Tbg972.10.1400 MLCHTSLFLISLLLLLQSASALQAIRRPTLRTTGSGWEPCDPGVNQWSGYFDIPGEQSDK HYFYWAFGPRDGNPNAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNH AYVIYIDQPAGVGFSYADKADYDKNEAEVSEDMYNFLQAFFGEHEDLRENDFFVVGESYG GHFAPATAYRINQGNKKGEGIYIPLAGLAVGNGLTDPYTQYASYPRLAWDWCKEVLGYSC ISRETYDSMNSMVPACQSNISACDADNSSSADSYCEMAGAACSGFVSDFLLTGINVYDIR KTCDGPLCYNTTGVDNFMNREDVQRSLGVDPMTWQACNMEVNEMFDIDWFKNFNYTISGL LEDGVRVMIYAGDMDFICNWIGNKEWTLALQWSGSEEFVKAPDTPFSSIDGSAAGLVRSV SSNTSSMHFSFVQVYRAGHMVPMDQPAAASTIIEKFMRNEPLS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/849 Sequence name : 849 Sequence length : 463 VALUES OF COMPUTED PARAMETERS Coef20 : 4.833 CoefTot : 1.306 ChDiff : -30 ZoneTo : 37 KR : 3 DE : 0 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.906 2.035 0.272 0.651 MesoH : -0.158 0.142 -0.233 0.250 MuHd_075 : 40.971 23.196 9.719 9.240 MuHd_095 : 34.989 16.573 7.828 8.090 MuHd_100 : 28.885 16.846 7.225 6.639 MuHd_105 : 28.012 16.593 7.061 6.441 Hmax_075 : 14.900 12.133 2.905 5.090 Hmax_095 : 12.250 6.212 1.772 3.728 Hmax_100 : 14.900 16.200 1.772 5.090 Hmax_105 : 11.900 10.800 1.831 4.110 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1819 0.8181 DFMC : 0.1063 0.8937 This protein is probably imported in mitochondria. f(Ser) = 0.1351 f(Arg) = 0.0811 CMi = 0.73638 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 463 Tbg972.10.1400 MLCHTSLFLISLLLLLQSASALQAIRRPTLRTTGSGWEPCDPGVNQWSGYFDIPGEQSDKHYFYWAFGPRDGNPNAPVLL 80 WMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNHAYVIYIDQPAGVGFSYADKADYDKNEAEVSEDMYNFLQAF 160 FGEHEDLRENDFFVVGESYGGHFAPATAYRINQGNKKGEGIYIPLAGLAVGNGLTDPYTQYASYPRLAWDWCKEVLGYSC 240 ISRETYDSMNSMVPACQSNISACDADNSSSADSYCEMAGAACSGFVSDFLLTGINVYDIRKTCDGPLCYNTTGVDNFMNR 320 EDVQRSLGVDPMTWQACNMEVNEMFDIDWFKNFNYTISGLLEDGVRVMIYAGDMDFICNWIGNKEWTLALQWSGSEEFVK 400 APDTPFSSIDGSAAGLVRSVSSNTSSMHFSFVQVYRAGHMVPMDQPAAASTIIEKFMRNEPLS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.1400 26 SALQAIR|RP 0.065 . Tbg972.10.1400 27 ALQAIRR|PT 0.124 . Tbg972.10.1400 31 IRRPTLR|TT 0.128 . Tbg972.10.1400 60 PGEQSDK|HY 0.060 . Tbg972.10.1400 70 YWAFGPR|DG 0.101 . Tbg972.10.1400 139 GFSYADK|AD 0.073 . Tbg972.10.1400 144 DKADYDK|NE 0.058 . Tbg972.10.1400 168 GEHEDLR|EN 0.084 . Tbg972.10.1400 190 APATAYR|IN 0.106 . Tbg972.10.1400 196 RINQGNK|KG 0.064 . Tbg972.10.1400 197 INQGNKK|GE 0.130 . Tbg972.10.1400 226 QYASYPR|LA 0.092 . Tbg972.10.1400 233 LAWDWCK|EV 0.068 . Tbg972.10.1400 243 GYSCISR|ET 0.131 . Tbg972.10.1400 300 INVYDIR|KT 0.101 . Tbg972.10.1400 301 NVYDIRK|TC 0.067 . Tbg972.10.1400 320 VDNFMNR|ED 0.077 . Tbg972.10.1400 325 NREDVQR|SL 0.192 . Tbg972.10.1400 351 FDIDWFK|NF 0.061 . Tbg972.10.1400 366 LLEDGVR|VM 0.076 . Tbg972.10.1400 384 CNWIGNK|EW 0.060 . Tbg972.10.1400 400 GSEEFVK|AP 0.070 . Tbg972.10.1400 418 SAAGLVR|SV 0.261 . Tbg972.10.1400 436 SFVQVYR|AG 0.110 . Tbg972.10.1400 455 ASTIIEK|FM 0.062 . Tbg972.10.1400 458 IIEKFMR|NE 0.080 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.1400 ATGCTGTGCCACACGTCGCTTTTTCTTATCTCGTTGCTACTCTTATTGCAGAGTGCAAGC GCCCTTCAGGCTATCCGCCGTCCGACGCTTCGCACGACGGGCTCTGGTTGGGAGCCTTGT GACCCCGGCGTTAATCAATGGAGCGGATATTTTGATATTCCTGGAGAGCAGAGTGACAAA CATTACTTCTACTGGGCATTTGGACCACGTGATGGCAATCCCAATGCCCCAGTGCTCCTG TGGATGACAGGTGGTCCTGGATGTAGTTCCATGTTTGCGCTACTTGCAGAGAATGGACCT TGCCTTATGAACGAAACGACTGGTGACATATACAACAATACGTACTCGTGGAACAACCAC GCGTATGTAATATATATCGATCAACCTGCCGGTGTGGGCTTTTCGTATGCGGATAAAGCG GATTATGATAAGAATGAAGCGGAGGTATCGGAGGACATGTACAACTTTCTACAGGCCTTC TTTGGTGAGCACGAGGACCTGCGTGAAAACGACTTCTTTGTTGTTGGGGAAAGCTACGGT GGCCACTTTGCTCCGGCTACAGCTTACCGCATTAACCAAGGCAATAAAAAGGGTGAAGGC ATATACATTCCTCTTGCAGGATTGGCTGTAGGAAACGGTTTAACAGATCCGTATACACAA TATGCGTCATATCCCAGACTTGCATGGGACTGGTGCAAGGAAGTTCTCGGCTATTCATGT ATATCCCGCGAGACATATGACTCCATGAACAGTATGGTGCCCGCTTGTCAGAGTAATATT TCTGCTTGTGACGCTGATAATTCATCATCCGCGGATTCTTACTGTGAGATGGCTGGTGCT GCTTGTAGCGGCTTTGTATCTGATTTTTTGCTTACAGGTATAAACGTTTATGATATCCGC AAAACATGTGATGGGCCATTATGTTACAACACAACGGGAGTTGACAACTTTATGAACCGT GAGGATGTTCAGAGGTCTCTGGGTGTAGATCCAATGACTTGGCAAGCTTGTAACATGGAG GTGAACGAAATGTTTGACATTGACTGGTTTAAGAACTTTAACTACACAATTAGTGGACTC CTCGAAGATGGAGTTCGAGTAATGATTTATGCCGGTGATATGGACTTTATCTGCAACTGG ATTGGAAATAAGGAGTGGACACTTGCACTTCAGTGGTCTGGAAGTGAAGAGTTTGTGAAG GCCCCTGATACCCCATTCTCATCTATTGATGGTAGTGCTGCGGGTCTTGTACGTAGCGTA TCATCAAACACATCGTCAATGCACTTCAGTTTTGTGCAGGTGTACCGTGCGGGTCACATG GTGCCGATGGATCAACCTGCTGCGGCATCCACTATAATTGAGAAATTCATGAGGAACGAA CCACTCTCGTAA
  • Download Fasta

  • Fasta :-

    MLCHTSLFLISLLLLLQSASALQAIRRPTLRTTGSGWEPCDPGVNQWSGYFDIPGEQSDK HYFYWAFGPRDGNPNAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNH AYVIYIDQPAGVGFSYADKADYDKNEAEVSEDMYNFLQAFFGEHEDLRENDFFVVGESYG GHFAPATAYRINQGNKKGEGIYIPLAGLAVGNGLTDPYTQYASYPRLAWDWCKEVLGYSC ISRETYDSMNSMVPACQSNISACDADNSSSADSYCEMAGAACSGFVSDFLLTGINVYDIR KTCDGPLCYNTTGVDNFMNREDVQRSLGVDPMTWQACNMEVNEMFDIDWFKNFNYTISGL LEDGVRVMIYAGDMDFICNWIGNKEWTLALQWSGSEEFVKAPDTPFSSIDGSAAGLVRSV SSNTSSMHFSFVQVYRAGHMVPMDQPAAASTIIEKFMRNEPLS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.1400407 SDTPFSSIDG0.995unspTbg972.10.1400407 SDTPFSSIDG0.995unspTbg972.10.1400407 SDTPFSSIDG0.995unspTbg972.10.140029 TIRRPTLRTT0.992unspTbg972.10.1400273 SSSADSYCEM0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India