Tbg972.10.17670 | 19S proteasome non-atpase subunit 8

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.17670OTHER0.9999870.0000110.000002
No Results

  • Fasta :-

    >Tbg972.10.17670 MANDDPKEPQTAVVNPEVDQQDTSVNGDDGDAERDGGKDVPVFTPAGARVEVHPLVLLSL VDHYARVNAKVSQKRRVAGLLLGRHLSHPGGIQVLDINNSFAVPFDEDPQNPDVWFLDTN YAEEMFLMFRRVHPKVRIVGWYSAGPSCAVQPNDMLLHLLIADRFSLNPVYCIVNTDPNN KGVPVLAYTTVHGRDGARSLEFRNIPTHLGAEEAEEIGIEHLLRDLTDSTITTLSAQVQE RELSLGHLGRVLQSIEEYLNDVAEGTMPISEDVLSVLQEVISLQPHIYHLKTSTDMVRHA NDQAIAMFIAAIGRCVCTLYDVIANRRRIAREIQEVRARRERSLKEKLGNEQHKAKEAAT EESRKEGAAKNKNNGGTSEGK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/410 Sequence name : 410 Sequence length : 381 VALUES OF COMPUTED PARAMETERS Coef20 : 2.597 CoefTot : 0.007 ChDiff : -14 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.853 0.379 0.558 MesoH : -0.645 0.392 -0.375 0.209 MuHd_075 : 9.449 6.855 1.471 1.144 MuHd_095 : 14.307 10.007 4.110 3.580 MuHd_100 : 12.921 3.668 3.829 2.604 MuHd_105 : 15.606 4.371 4.478 2.515 Hmax_075 : -8.400 4.667 -3.376 2.077 Hmax_095 : -2.887 3.675 -2.387 2.249 Hmax_100 : -0.400 3.000 -1.814 2.320 Hmax_105 : 6.067 3.500 -0.114 3.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9963 0.0037 DFMC : 0.9958 0.0042
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 381 Tbg972.10.17670 MANDDPKEPQTAVVNPEVDQQDTSVNGDDGDAERDGGKDVPVFTPAGARVEVHPLVLLSLVDHYARVNAKVSQKRRVAGL 80 LLGRHLSHPGGIQVLDINNSFAVPFDEDPQNPDVWFLDTNYAEEMFLMFRRVHPKVRIVGWYSAGPSCAVQPNDMLLHLL 160 IADRFSLNPVYCIVNTDPNNKGVPVLAYTTVHGRDGARSLEFRNIPTHLGAEEAEEIGIEHLLRDLTDSTITTLSAQVQE 240 RELSLGHLGRVLQSIEEYLNDVAEGTMPISEDVLSVLQEVISLQPHIYHLKTSTDMVRHANDQAIAMFIAAIGRCVCTLY 320 DVIANRRRIAREIQEVRARRERSLKEKLGNEQHKAKEAATEESRKEGAAKNKNNGGTSEGK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .....................P....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.17670 7 MANDDPK|EP 0.068 . Tbg972.10.17670 34 DDGDAER|DG 0.111 . Tbg972.10.17670 38 AERDGGK|DV 0.080 . Tbg972.10.17670 49 FTPAGAR|VE 0.062 . Tbg972.10.17670 66 LVDHYAR|VN 0.072 . Tbg972.10.17670 70 YARVNAK|VS 0.066 . Tbg972.10.17670 74 NAKVSQK|RR 0.063 . Tbg972.10.17670 75 AKVSQKR|RV 0.230 . Tbg972.10.17670 76 KVSQKRR|VA 0.274 . Tbg972.10.17670 84 AGLLLGR|HL 0.082 . Tbg972.10.17670 130 EMFLMFR|RV 0.106 . Tbg972.10.17670 131 MFLMFRR|VH 0.112 . Tbg972.10.17670 135 FRRVHPK|VR 0.073 . Tbg972.10.17670 137 RVHPKVR|IV 0.193 . Tbg972.10.17670 164 HLLIADR|FS 0.069 . Tbg972.10.17670 181 NTDPNNK|GV 0.065 . Tbg972.10.17670 194 YTTVHGR|DG 0.095 . Tbg972.10.17670 198 HGRDGAR|SL 0.118 . Tbg972.10.17670 203 ARSLEFR|NI 0.148 . Tbg972.10.17670 224 GIEHLLR|DL 0.137 . Tbg972.10.17670 241 SAQVQER|EL 0.122 . Tbg972.10.17670 250 SLGHLGR|VL 0.113 . Tbg972.10.17670 291 PHIYHLK|TS 0.066 . Tbg972.10.17670 298 TSTDMVR|HA 0.122 . Tbg972.10.17670 314 FIAAIGR|CV 0.132 . Tbg972.10.17670 326 YDVIANR|RR 0.079 . Tbg972.10.17670 327 DVIANRR|RI 0.099 . Tbg972.10.17670 328 VIANRRR|IA 0.196 . Tbg972.10.17670 331 NRRRIAR|EI 0.487 . Tbg972.10.17670 337 REIQEVR|AR 0.067 . Tbg972.10.17670 339 IQEVRAR|RE 0.073 . Tbg972.10.17670 340 QEVRARR|ER 0.384 . Tbg972.10.17670 342 VRARRER|SL 0.609 *ProP* Tbg972.10.17670 345 RRERSLK|EK 0.170 . Tbg972.10.17670 347 ERSLKEK|LG 0.076 . Tbg972.10.17670 354 LGNEQHK|AK 0.091 . Tbg972.10.17670 356 NEQHKAK|EA 0.099 . Tbg972.10.17670 364 AATEESR|KE 0.080 . Tbg972.10.17670 365 ATEESRK|EG 0.075 . Tbg972.10.17670 370 RKEGAAK|NK 0.087 . Tbg972.10.17670 372 EGAAKNK|NN 0.075 . Tbg972.10.17670 381 GGTSEGK|-- 0.063 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.17670 ATGGCCAATGATGACCCCAAGGAACCGCAAACTGCGGTAGTCAATCCTGAAGTGGATCAA CAGGACACATCCGTCAATGGGGACGACGGCGACGCGGAACGTGATGGTGGAAAAGATGTT CCGGTATTTACTCCTGCGGGGGCACGAGTAGAGGTTCACCCACTTGTTTTGCTCTCACTT GTCGACCACTACGCCCGTGTTAACGCAAAAGTGTCACAAAAGCGGCGTGTCGCTGGGCTT CTTCTCGGCCGTCACCTCAGCCACCCTGGTGGAATACAAGTGCTTGACATTAACAACAGT TTCGCTGTTCCGTTTGATGAGGACCCTCAGAATCCTGATGTCTGGTTTCTCGATACAAAC TATGCAGAGGAAATGTTCCTAATGTTTCGTCGCGTACACCCCAAGGTGCGGATTGTTGGG TGGTATTCTGCAGGTCCCTCGTGCGCGGTGCAGCCGAATGACATGCTCTTGCACCTCCTT ATTGCAGATCGCTTCTCGCTGAATCCGGTGTACTGCATTGTGAATACAGATCCTAACAAC AAAGGTGTGCCCGTGCTGGCTTATACGACGGTGCATGGCCGAGACGGGGCGCGATCGTTG GAGTTTCGCAACATCCCCACACATCTCGGCGCGGAAGAGGCGGAGGAAATCGGTATTGAA CATCTCTTGCGGGATCTTACCGACTCCACCATCACAACACTTTCCGCCCAGGTCCAGGAG CGTGAGCTTTCACTTGGCCACCTCGGTCGTGTTCTGCAGTCAATTGAGGAGTATCTTAAT GACGTTGCAGAGGGTACCATGCCCATCTCAGAGGATGTTTTGAGTGTCTTGCAGGAAGTT ATCAGCCTGCAGCCGCACATTTATCACTTGAAGACATCAACTGACATGGTGCGGCATGCA AATGATCAGGCGATTGCAATGTTCATCGCCGCCATTGGGCGATGTGTCTGCACTCTCTAC GACGTTATTGCTAACCGACGGCGCATAGCTCGCGAAATACAGGAAGTGAGAGCGCGGCGG GAGCGGTCACTAAAGGAAAAGTTAGGAAACGAACAGCACAAGGCGAAGGAGGCCGCCACG GAGGAAAGTAGAAAAGAAGGTGCTGCGAAAAATAAGAATAACGGTGGAACTTCAGAAGGG AAGTAA
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  • Fasta :-

    MANDDPKEPQTAVVNPEVDQQDTSVNGDDGDAERDGGKDVPVFTPAGARVEVHPLVLLSL VDHYARVNAKVSQKRRVAGLLLGRHLSHPGGIQVLDINNSFAVPFDEDPQNPDVWFLDTN YAEEMFLMFRRVHPKVRIVGWYSAGPSCAVQPNDMLLHLLIADRFSLNPVYCIVNTDPNN KGVPVLAYTTVHGRDGARSLEFRNIPTHLGAEEAEEIGIEHLLRDLTDSTITTLSAQVQE RELSLGHLGRVLQSIEEYLNDVAEGTMPISEDVLSVLQEVISLQPHIYHLKTSTDMVRHA NDQAIAMFIAAIGRCVCTLYDVIANRRRIAREIQEVRARRERSLKEKLGNEQHKAKEAAT EESRKEGAAKNKNNGGTSEGK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.17670343 SRRERSLKEK0.997unspTbg972.10.17670363 SATEESRKEG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India