Tbg972.10.200 | proteasome alpha 2 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.200SP0.4649250.4869440.048131CS pos: 34-35. CRP-MS. Pr: 0.4574
No Results

  • Fasta :-

    >Tbg972.10.200 MLFPLILPPIPFMKEESFIFFCLLVLCNTRLCRPMSESSYGLTTFSPSGRLVQIEYATTA ASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVD AARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQ LDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKEGFDGRMTAENT QVGRVVEGRFELLTVEQLKDYLDQI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/561 Sequence name : 561 Sequence length : 265 VALUES OF COMPUTED PARAMETERS Coef20 : 3.636 CoefTot : -0.759 ChDiff : -2 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.741 1.582 0.206 0.582 MesoH : 0.021 0.534 -0.162 0.250 MuHd_075 : 17.577 9.542 3.627 3.078 MuHd_095 : 14.932 16.153 4.378 2.981 MuHd_100 : 11.632 13.382 4.139 2.380 MuHd_105 : 7.475 10.251 3.355 2.199 Hmax_075 : 17.937 13.563 1.831 5.583 Hmax_095 : 16.625 15.750 2.529 5.443 Hmax_100 : 16.500 15.100 2.558 5.680 Hmax_105 : 19.483 19.483 3.511 6.487 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9725 0.0275 DFMC : 0.9891 0.0109
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 265 Tbg972.10.200 MLFPLILPPIPFMKEESFIFFCLLVLCNTRLCRPMSESSYGLTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAA 80 EKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVR 160 PFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKEGFDGRMTAENT 240 QVGRVVEGRFELLTVEQLKDYLDQI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.200 14 PPIPFMK|EE 0.073 . Tbg972.10.200 30 LVLCNTR|LC 0.069 . Tbg972.10.200 33 CNTRLCR|PM 0.193 . Tbg972.10.200 50 TFSPSGR|LV 0.169 . Tbg972.10.200 63 ATTAASK|GT 0.065 . Tbg972.10.200 71 TTALGVK|AT 0.070 . Tbg972.10.200 82 VVIAAEK|KT 0.057 . Tbg972.10.200 83 VIAAEKK|TT 0.105 . Tbg972.10.200 96 DSLTLHK|VF 0.052 . Tbg972.10.200 116 GIGPDCR|VL 0.083 . Tbg972.10.200 123 VLVDAAR|RA 0.088 . Tbg972.10.200 124 LVDAARR|AC 0.108 . Tbg972.10.200 128 ARRACQR|YR 0.096 . Tbg972.10.200 130 RACQRYR|LT 0.105 . Tbg972.10.200 144 PISQLVR|QI 0.129 . Tbg972.10.200 160 TQSGGVR|PF 0.141 . Tbg972.10.200 174 VAGADSR|GN 0.084 . Tbg972.10.200 191 GTFWTWK|AT 0.088 . Tbg972.10.200 197 KATSIGK|GS 0.064 . Tbg972.10.200 203 KGSPDAR|TF 0.108 . Tbg972.10.200 208 ARTFLEK|RY 0.066 . Tbg972.10.200 209 RTFLEKR|YT 0.201 . Tbg972.10.200 228 TALLTLK|EG 0.070 . Tbg972.10.200 234 KEGFDGR|MT 0.092 . Tbg972.10.200 244 ENTQVGR|VV 0.115 . Tbg972.10.200 249 GRVVEGR|FE 0.096 . Tbg972.10.200 259 LTVEQLK|DY 0.073 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.200 ATGCTTTTTCCGTTGATTCTTCCTCCTATCCCATTTATGAAAGAAGAAAGTTTCATCTTT TTTTGTTTGCTTGTGCTTTGTAATACTCGCCTGTGCCGACCAATGTCTGAGTCTTCGTAC GGTCTTACAACATTCAGTCCTTCCGGAAGACTTGTGCAGATTGAGTATGCAACGACGGCC GCCTCCAAAGGGACAACAGCCTTAGGTGTCAAGGCAACTGATGGTGTTGTCATTGCAGCA GAAAAGAAAACAACATCACCCCTCGCTGACTCCTTAACACTTCATAAAGTGTTTGCTTTG GATGATCATGTTGGCTGTACGTATAGTGGGATTGGTCCTGATTGCCGCGTGCTTGTTGAT GCTGCCCGACGCGCATGCCAGCGCTACCGCCTGACATATCATGAGCCAATGCCTATTAGT CAACTGGTTCGTCAAATCAGTTTCTTGTTTCAAGAATTCACGCAATCCGGCGGTGTCCGT CCATTTGGGTGTTCTCTTCTCGTTGCCGGGGCGGATTCTCGTGGAAATCATCTTTATCAA CTGGACCCCAGTGGAACCTTCTGGACGTGGAAAGCGACATCTATCGGCAAAGGCAGCCCC GATGCGAGAACATTCCTCGAGAAACGGTACACCAATGAAATGGAAATTGAAGACGCCGTA CACACTGCGCTTTTGACACTGAAGGAGGGGTTTGATGGGAGAATGACAGCTGAAAACACG CAAGTGGGTCGGGTGGTTGAAGGTCGCTTTGAACTGCTTACGGTAGAGCAGTTGAAGGAT TACCTGGACCAAATCTAA
  • Download Fasta

  • Fasta :-

    MLFPLILPPIPFMKEESFIFFCLLVLCNTRLCRPMSESSYGLTTFSPSGRLVQIEYATTA ASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVD AARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQ LDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKEGFDGRMTAENT QVGRVVEGRFELLTVEQLKDYLDQI

  • title: active site
  • coordinates: T65,E81,K83,K96,K197
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India