Tbg972.10.3790 | proteasome regulatory non-ATPase subunit 11, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.3790OTHER0.9883640.0055640.006072
No Results

  • Fasta :-

    >Tbg972.10.3790 MFHPQLVAGGANRAAPAEELRDTAETVQISSLALLKMLMHGRAGVPLEVMGLMIGELIDD YTVRVSDVFSMPQTATGQSVEAVDPEYQVHMLDKLSVVGRPEKVVGWYHSHPGFGCWLSG EDVMTASSYEQLTPRSVSVVIDPIQSVRGKVVIDAFRTTKDPHTGPRIMFQEPRQTTSNI GWLTRPSPIALTRGLDRDYYSLPITFRKKNHELALLLNVYKKGWQEGFRLENMTRFDRNT VREKMRALASLAVQSERFIVQGLDEDDVGNVGRANPIAHLQSESEGLINASLNQSIGAMI NGVVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/821 Sequence name : 821 Sequence length : 305 VALUES OF COMPUTED PARAMETERS Coef20 : 3.343 CoefTot : -0.572 ChDiff : -4 ZoneTo : 17 KR : 1 DE : 0 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.929 1.241 -0.080 0.552 MesoH : -0.513 0.395 -0.373 0.222 MuHd_075 : 29.735 17.812 7.499 5.764 MuHd_095 : 7.042 9.424 1.854 3.024 MuHd_100 : 5.443 7.378 1.506 2.244 MuHd_105 : 8.067 8.171 2.426 2.382 Hmax_075 : 9.362 9.800 0.002 4.043 Hmax_095 : 3.000 6.387 -1.368 3.482 Hmax_100 : 2.400 6.400 -1.104 2.980 Hmax_105 : 5.200 7.175 -0.847 3.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8619 0.1381 DFMC : 0.8280 0.1720
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 305 Tbg972.10.3790 MFHPQLVAGGANRAAPAEELRDTAETVQISSLALLKMLMHGRAGVPLEVMGLMIGELIDDYTVRVSDVFSMPQTATGQSV 80 EAVDPEYQVHMLDKLSVVGRPEKVVGWYHSHPGFGCWLSGEDVMTASSYEQLTPRSVSVVIDPIQSVRGKVVIDAFRTTK 160 DPHTGPRIMFQEPRQTTSNIGWLTRPSPIALTRGLDRDYYSLPITFRKKNHELALLLNVYKKGWQEGFRLENMTRFDRNT 240 VREKMRALASLAVQSERFIVQGLDEDDVGNVGRANPIAHLQSESEGLINASLNQSIGAMINGVVF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.3790 13 VAGGANR|AA 0.107 . Tbg972.10.3790 21 APAEELR|DT 0.107 . Tbg972.10.3790 36 SSLALLK|ML 0.073 . Tbg972.10.3790 42 KMLMHGR|AG 0.094 . Tbg972.10.3790 64 IDDYTVR|VS 0.075 . Tbg972.10.3790 94 QVHMLDK|LS 0.069 . Tbg972.10.3790 100 KLSVVGR|PE 0.124 . Tbg972.10.3790 103 VVGRPEK|VV 0.189 . Tbg972.10.3790 135 YEQLTPR|SV 0.245 . Tbg972.10.3790 148 DPIQSVR|GK 0.084 . Tbg972.10.3790 150 IQSVRGK|VV 0.124 . Tbg972.10.3790 157 VVIDAFR|TT 0.074 . Tbg972.10.3790 160 DAFRTTK|DP 0.176 . Tbg972.10.3790 167 DPHTGPR|IM 0.125 . Tbg972.10.3790 174 IMFQEPR|QT 0.107 . Tbg972.10.3790 185 NIGWLTR|PS 0.087 . Tbg972.10.3790 193 SPIALTR|GL 0.111 . Tbg972.10.3790 197 LTRGLDR|DY 0.103 . Tbg972.10.3790 207 SLPITFR|KK 0.087 . Tbg972.10.3790 208 LPITFRK|KN 0.089 . Tbg972.10.3790 209 PITFRKK|NH 0.084 . Tbg972.10.3790 221 LLLNVYK|KG 0.065 . Tbg972.10.3790 222 LLNVYKK|GW 0.171 . Tbg972.10.3790 229 GWQEGFR|LE 0.074 . Tbg972.10.3790 235 RLENMTR|FD 0.087 . Tbg972.10.3790 238 NMTRFDR|NT 0.155 . Tbg972.10.3790 242 FDRNTVR|EK 0.105 . Tbg972.10.3790 244 RNTVREK|MR 0.057 . Tbg972.10.3790 246 TVREKMR|AL 0.112 . Tbg972.10.3790 257 LAVQSER|FI 0.137 . Tbg972.10.3790 273 DVGNVGR|AN 0.098 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.3790 ATGTTCCATCCCCAATTGGTGGCGGGTGGTGCCAATCGCGCTGCACCGGCAGAGGAGCTA CGCGACACAGCCGAGACGGTGCAGATATCGTCTTTGGCATTGCTCAAAATGCTGATGCAC GGGCGCGCTGGGGTGCCGCTCGAGGTAATGGGTTTGATGATTGGTGAGTTGATTGACGAC TATACGGTCCGTGTATCTGATGTCTTCTCCATGCCCCAAACGGCCACGGGTCAATCCGTT GAAGCTGTGGACCCAGAGTATCAAGTTCATATGTTAGACAAACTCTCCGTGGTGGGTCGA CCGGAAAAAGTTGTTGGGTGGTACCACAGTCACCCTGGTTTCGGCTGCTGGCTTTCTGGT GAGGATGTAATGACGGCGAGCAGCTATGAGCAACTGACGCCGCGCAGCGTGTCGGTAGTG ATCGACCCTATCCAATCGGTCCGCGGCAAAGTAGTGATTGACGCCTTCCGCACCACGAAG GACCCACATACGGGGCCGCGAATCATGTTCCAAGAGCCACGACAGACAACAAGCAACATC GGGTGGCTGACGCGACCTTCTCCTATTGCTCTCACCCGTGGGTTGGATCGTGACTATTAC AGTCTTCCCATTACCTTCCGCAAGAAAAACCACGAACTTGCGCTACTCCTCAACGTCTAC AAGAAGGGTTGGCAGGAGGGTTTCCGATTAGAAAACATGACACGTTTTGACCGCAATACG GTGCGAGAGAAGATGCGTGCGCTGGCGTCGCTTGCCGTCCAGTCGGAGCGATTCATTGTT CAGGGTCTCGATGAAGATGATGTAGGCAATGTCGGTCGAGCAAATCCCATTGCGCATCTC CAATCCGAATCGGAGGGCCTAATCAACGCGAGTCTTAACCAATCCATAGGAGCGATGATT AATGGGGTTGTCTTCTGA
  • Download Fasta

  • Fasta :-

    MFHPQLVAGGANRAAPAEELRDTAETVQISSLALLKMLMHGRAGVPLEVMGLMIGELIDD YTVRVSDVFSMPQTATGQSVEAVDPEYQVHMLDKLSVVGRPEKVVGWYHSHPGFGCWLSG EDVMTASSYEQLTPRSVSVVIDPIQSVRGKVVIDAFRTTKDPHTGPRIMFQEPRQTTSNI GWLTRPSPIALTRGLDRDYYSLPITFRKKNHELALLLNVYKKGWQEGFRLENMTRFDRNT VREKMRALASLAVQSERFIVQGLDEDDVGNVGRANPIAHLQSESEGLINASLNQSIGAMI NGVVF

  • title: MPN+ (JAMM) motif
  • coordinates: E48,H109,H111,S119,D122
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.10.3790133 TYEQLTPRSV0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India