Tbg972.10.4380 | Tbgamb.27571 protease regulatory ATPase subunit, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.4380OTHER0.9998510.0000410.000108
No Results

  • Fasta :-

    >Tbg972.10.4380 MQERQEEYASLSEREQLRQDVIAKTIRRNESRARVREVAKAMEASERELMRVVDQLSALM SIGHFVGEILHKVDEERFIVQSVSGARHLVGYKKSIKPEKLKIGTRVALEITTLTIVRVL PREVDPQVYNMQVMENEKNISFQEIGGLQEQMRQMREVVELPLTNPELFVRVGISPPKGV LLYGPPGTGKTLLAKAIASNVDAAFLKIVASSIVDKYIGESARVLREMFAFARDHEPCII FIDEVDAIGGKRIEGSSSDREVQRTLMELLHQMDGFEKLGKVKVIMATNRPDTLDPALMR PGRLDRKIEIGLPNEAGRLDVLKIHASKITKQGDIDYDSIVKLSEGFNGADLRNVCTEAG MFALRAGRDYVINEDFNKATRKVADSKKLESAPHQYSEQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/263 Sequence name : 263 Sequence length : 399 VALUES OF COMPUTED PARAMETERS Coef20 : 3.395 CoefTot : -0.155 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.635 1.318 -0.064 0.463 MesoH : -0.473 0.549 -0.315 0.263 MuHd_075 : 25.849 8.324 3.519 5.806 MuHd_095 : 33.158 9.121 6.218 4.883 MuHd_100 : 29.383 4.430 4.552 4.483 MuHd_105 : 17.236 2.207 1.781 2.973 Hmax_075 : -13.125 -4.638 -6.343 -0.455 Hmax_095 : -7.612 -4.462 -4.855 -0.000 Hmax_100 : -7.400 -7.900 -5.544 -1.100 Hmax_105 : -11.500 -7.500 -6.172 -1.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9524 0.0476 DFMC : 0.9245 0.0755
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 399 Tbg972.10.4380 MQERQEEYASLSEREQLRQDVIAKTIRRNESRARVREVAKAMEASERELMRVVDQLSALMSIGHFVGEILHKVDEERFIV 80 QSVSGARHLVGYKKSIKPEKLKIGTRVALEITTLTIVRVLPREVDPQVYNMQVMENEKNISFQEIGGLQEQMRQMREVVE 160 LPLTNPELFVRVGISPPKGVLLYGPPGTGKTLLAKAIASNVDAAFLKIVASSIVDKYIGESARVLREMFAFARDHEPCII 240 FIDEVDAIGGKRIEGSSSDREVQRTLMELLHQMDGFEKLGKVKVIMATNRPDTLDPALMRPGRLDRKIEIGLPNEAGRLD 320 VLKIHASKITKQGDIDYDSIVKLSEGFNGADLRNVCTEAGMFALRAGRDYVINEDFNKATRKVADSKKLESAPHQYSEQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >Tbg972.10.4380 ATGCAGGAACGTCAGGAGGAGTACGCCTCACTTTCTGAGCGGGAACAGTTGCGGCAAGAC GTCATTGCCAAAACTATACGACGCAATGAATCACGGGCACGCGTCCGTGAGGTTGCAAAG GCAATGGAGGCATCGGAGAGGGAGTTGATGCGCGTGGTGGATCAACTTAGTGCTCTCATG AGCATTGGCCACTTCGTTGGTGAAATTCTTCACAAGGTGGATGAAGAGCGGTTTATCGTA CAGAGCGTTTCCGGTGCTCGCCATCTCGTTGGTTACAAGAAAAGTATCAAGCCGGAGAAG CTGAAAATTGGAACTCGTGTCGCACTGGAAATTACAACGCTAACAATTGTGAGAGTGCTT CCCCGTGAGGTTGACCCACAGGTATATAACATGCAAGTTATGGAGAACGAGAAGAATATT TCGTTCCAGGAAATCGGTGGCTTGCAGGAGCAGATGCGGCAAATGCGAGAGGTTGTAGAA CTTCCTCTGACGAATCCGGAGTTGTTTGTGCGTGTCGGTATTTCACCTCCTAAGGGCGTG CTTCTTTACGGCCCACCGGGAACCGGCAAGACGCTACTTGCTAAAGCAATTGCGTCCAAT GTTGACGCTGCTTTCCTGAAAATTGTAGCGTCCTCTATTGTAGATAAATATATTGGCGAG TCGGCACGAGTACTGCGTGAGATGTTTGCTTTTGCGCGCGATCATGAGCCATGCATTATT TTTATTGATGAAGTGGATGCTATTGGCGGGAAGCGAATCGAGGGTAGTTCCTCCGACCGC GAGGTCCAGCGTACGCTAATGGAACTACTGCATCAGATGGATGGCTTTGAGAAGCTAGGG AAAGTGAAAGTGATTATGGCGACCAACCGCCCCGACACGTTGGACCCCGCGCTTATGCGT CCCGGGAGGTTAGACCGTAAAATCGAAATCGGATTACCGAACGAGGCCGGTCGTCTTGAC GTACTGAAGATTCACGCATCCAAGATTACGAAACAAGGCGACATTGATTACGACTCGATC GTCAAACTCTCTGAAGGTTTTAATGGTGCCGACTTACGCAATGTTTGTACCGAGGCCGGG ATGTTTGCCCTTCGCGCGGGCAGGGATTACGTCATCAACGAAGACTTCAACAAAGCAACC CGGAAGGTGGCAGATTCTAAGAAACTGGAGAGTGCTCCACATCAATACTCAGAGCAATAG
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  • Fasta :-

    MQERQEEYASLSEREQLRQDVIAKTIRRNESRARVREVAKAMEASERELMRVVDQLSALM SIGHFVGEILHKVDEERFIVQSVSGARHLVGYKKSIKPEKLKIGTRVALEITTLTIVRVL PREVDPQVYNMQVMENEKNISFQEIGGLQEQMRQMREVVELPLTNPELFVRVGISPPKGV LLYGPPGTGKTLLAKAIASNVDAAFLKIVASSIVDKYIGESARVLREMFAFARDHEPCII FIDEVDAIGGKRIEGSSSDREVQRTLMELLHQMDGFEKLGKVKVIMATNRPDTLDPALMR PGRLDRKIEIGLPNEAGRLDVLKIHASKITKQGDIDYDSIVKLSEGFNGADLRNVCTEAG MFALRAGRDYVINEDFNKATRKVADSKKLESAPHQYSEQ

  • title: ATP binding site
  • coordinates: P185,P186,G187,T188,G189,K190,T191,L192,D243,N289
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.4380386 SKVADSKKLE0.995unspTbg972.10.4380386 SKVADSKKLE0.995unspTbg972.10.4380386 SKVADSKKLE0.995unspTbg972.10.438012 SYASLSEREQ0.995unspTbg972.10.4380258 SEGSSSDREV0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India