Tbg972.10.5610 | serine peptidase clan SF, family S26B, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.5610OTHER0.6892050.2785610.032234
No Results

  • Fasta :-

    >Tbg972.10.5610 MVMRWGFFSVNRNLPCIFLGAFIGYNVDVCCSVKGRSMYPTLIPGDYVLFIPSFVHLLAR ELTKMQLVREGDIVVMQISPELRVCKRVVRTTSDASVVQYWNNLQFTVPALVLGGEPSEN SGGEEETGAHSDNSSRSHEWDTCLERAGNKSALWLWLEGDNPLESFDSRHTGAMPVECLR GRVLLKIWPSLTHLPSTAPKGGAGEGP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/310 Sequence name : 310 Sequence length : 207 VALUES OF COMPUTED PARAMETERS Coef20 : 4.438 CoefTot : -1.961 ChDiff : -3 ZoneTo : 60 KR : 5 DE : 2 CleavSite : 70 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.641 0.357 0.665 MesoH : -0.228 0.691 -0.211 0.287 MuHd_075 : 28.360 19.935 7.310 6.044 MuHd_095 : 29.498 19.887 6.538 8.104 MuHd_100 : 26.982 19.235 7.578 6.865 MuHd_105 : 26.356 16.731 7.584 5.866 Hmax_075 : 15.400 16.500 2.679 5.420 Hmax_095 : 20.037 20.825 3.663 7.193 Hmax_100 : 18.500 20.900 3.656 7.660 Hmax_105 : 17.033 20.883 3.514 7.023 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4309 0.5691 DFMC : 0.7562 0.2438
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 207 Tbg972.10.5610 MVMRWGFFSVNRNLPCIFLGAFIGYNVDVCCSVKGRSMYPTLIPGDYVLFIPSFVHLLARELTKMQLVREGDIVVMQISP 80 ELRVCKRVVRTTSDASVVQYWNNLQFTVPALVLGGEPSENSGGEEETGAHSDNSSRSHEWDTCLERAGNKSALWLWLEGD 160 NPLESFDSRHTGAMPVECLRGRVLLKIWPSLTHLPSTAPKGGAGEGP 240 ................................................................................ 80 ................................................................................ 160 ............................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.5610 4 ---MVMR|WG 0.089 . Tbg972.10.5610 12 GFFSVNR|NL 0.088 . Tbg972.10.5610 34 DVCCSVK|GR 0.061 . Tbg972.10.5610 36 CCSVKGR|SM 0.194 . Tbg972.10.5610 60 FVHLLAR|EL 0.104 . Tbg972.10.5610 64 LARELTK|MQ 0.067 . Tbg972.10.5610 69 TKMQLVR|EG 0.126 . Tbg972.10.5610 83 QISPELR|VC 0.100 . Tbg972.10.5610 86 PELRVCK|RV 0.121 . Tbg972.10.5610 87 ELRVCKR|VV 0.236 . Tbg972.10.5610 90 VCKRVVR|TT 0.249 . Tbg972.10.5610 136 HSDNSSR|SH 0.119 . Tbg972.10.5610 146 WDTCLER|AG 0.074 . Tbg972.10.5610 150 LERAGNK|SA 0.071 . Tbg972.10.5610 169 LESFDSR|HT 0.149 . Tbg972.10.5610 180 MPVECLR|GR 0.068 . Tbg972.10.5610 182 VECLRGR|VL 0.085 . Tbg972.10.5610 186 RGRVLLK|IW 0.061 . Tbg972.10.5610 200 LPSTAPK|GG 0.085 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.5610 ATGGTGATGCGTTGGGGATTTTTTTCGGTGAATCGAAACCTACCATGTATATTTCTTGGG GCGTTTATCGGATATAACGTTGACGTCTGCTGCTCAGTAAAGGGCAGGTCAATGTATCCA ACACTAATACCCGGTGATTACGTGTTGTTCATTCCATCTTTTGTGCATTTACTTGCAAGG GAACTGACGAAGATGCAGTTGGTGCGGGAGGGAGATATTGTTGTTATGCAAATTTCACCG GAGTTAAGAGTTTGCAAACGTGTCGTTCGAACCACCAGCGATGCTTCGGTCGTGCAGTAC TGGAACAACTTACAGTTCACGGTACCGGCGCTGGTGCTGGGGGGTGAGCCTTCGGAAAAC TCAGGAGGAGAGGAAGAAACTGGCGCACATAGTGACAACAGTTCTAGGTCACACGAATGG GACACATGCCTCGAACGTGCTGGAAACAAGTCAGCGCTTTGGCTCTGGCTCGAGGGTGAT AATCCTCTAGAGAGTTTTGACTCACGTCATACCGGCGCCATGCCCGTTGAATGTCTCCGT GGCCGTGTGCTGTTGAAAATATGGCCCTCCCTTACACATCTTCCTTCAACTGCTCCGAAA GGGGGAGCGGGTGAGGGACCATAA
  • Download Fasta

  • Fasta :-

    MVMRWGFFSVNRNLPCIFLGAFIGYNVDVCCSVKGRSMYPTLIPGDYVLFIPSFVHLLAR ELTKMQLVREGDIVVMQISPELRVCKRVVRTTSDASVVQYWNNLQFTVPALVLGGEPSEN SGGEEETGAHSDNSSRSHEWDTCLERAGNKSALWLWLEGDNPLESFDSRHTGAMPVECLR GRVLLKIWPSLTHLPSTAPKGGAGEGP

  • title: Catalytic site
  • coordinates: S37,K86
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.5610134 SHSDNSSRSH0.99unspTbg972.10.5610137 SNSSRSHEWD0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India