Tbg972.10.5730 | proteasome subunit beta type-2, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.5730OTHER0.9518590.0479080.000233
No Results

  • Fasta :-

    >Tbg972.10.5730 MAETTIGFRCQDFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEY VKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDV ATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVKK RVVVSNNTFICKAVTKDGVERVQSVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/713 Sequence name : 713 Sequence length : 206 VALUES OF COMPUTED PARAMETERS Coef20 : 4.217 CoefTot : 0.141 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.159 1.612 0.088 0.635 MesoH : -0.405 0.225 -0.285 0.243 MuHd_075 : 14.726 9.111 5.307 2.554 MuHd_095 : 7.006 10.185 4.202 2.149 MuHd_100 : 6.856 6.184 3.145 1.683 MuHd_105 : 16.251 3.491 3.534 2.150 Hmax_075 : 17.617 18.900 4.870 5.227 Hmax_095 : 7.000 13.912 1.998 4.471 Hmax_100 : 9.600 14.100 2.017 4.490 Hmax_105 : 10.675 14.350 2.042 4.515 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9803 0.0197 DFMC : 0.9800 0.0200
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 206 Tbg972.10.5730 MAETTIGFRCQDFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTH 80 ATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRP 160 NLTAQEGVELMQKCCDEVKKRVVVSNNTFICKAVTKDGVERVQSVS 240 ................................................................................ 80 ................................................................................ 160 .............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.5730 9 ETTIGFR|CQ 0.074 . Tbg972.10.5730 28 NAFYYIK|IT 0.067 . Tbg972.10.5730 35 ITDTEDK|IT 0.059 . Tbg972.10.5730 43 TELDSHK|VV 0.070 . Tbg972.10.5730 54 AGENGPR|TH 0.071 . Tbg972.10.5730 62 HFVEYVK|CN 0.060 . Tbg972.10.5730 68 KCNMALK|KM 0.067 . Tbg972.10.5730 69 CNMALKK|MR 0.158 . Tbg972.10.5730 71 MALKKMR|EH 0.130 . Tbg972.10.5730 75 KMREHGR|MI 0.164 . Tbg972.10.5730 87 ATASFMR|NT 0.095 . Tbg972.10.5730 95 TLAGALR|SR 0.127 . Tbg972.10.5730 97 AGALRSR|DG 0.079 . Tbg972.10.5730 156 VTAMLDR|MW 0.125 . Tbg972.10.5730 159 MLDRMWR|PN 0.254 . Tbg972.10.5730 173 GVELMQK|CC 0.061 . Tbg972.10.5730 179 KCCDEVK|KR 0.056 . Tbg972.10.5730 180 CCDEVKK|RV 0.122 . Tbg972.10.5730 181 CDEVKKR|VV 0.226 . Tbg972.10.5730 192 NNTFICK|AV 0.079 . Tbg972.10.5730 196 ICKAVTK|DG 0.067 . Tbg972.10.5730 201 TKDGVER|VQ 0.098 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.5730 ATGGCAGAGACGACTATCGGGTTTAGGTGCCAGGACTTTGTTTTGGTGGCAGCTGCGGGG CTAAATGCGTTTTACTACATTAAGATAACGGATACGGAGGATAAGATCACGGAACTCGAC TCTCACAAGGTGGTGGCCTGCGCGGGTGAAAACGGGCCGCGGACGCACTTTGTGGAGTAC GTGAAATGCAATATGGCGCTCAAGAAGATGCGCGAGCACGGCCGTATGATAAGCACACAC GCTACGGCATCTTTTATGCGTAATACGCTTGCTGGGGCGCTGCGTAGCCGTGACGGGTTG TATCCTGTCAATTGCCTGCTCGCTGGTTTCGACGTACCGGCATCCGCGGAGGACGATGTT GCAACAGGTGCGCACCTCTACTATCTGGATTACCTGGGCACACTTCAGGAGGTGCCTTAC GGCTGTCACGGATACGGAGCACCGTTTGTTACCGCCATGCTTGACCGGATGTGGCGTCCC AATTTGACAGCACAGGAGGGAGTTGAGCTAATGCAAAAATGCTGTGATGAGGTGAAGAAG CGAGTAGTGGTAAGCAACAATACTTTTATATGTAAGGCTGTAACGAAGGACGGCGTAGAG CGAGTGCAATCTGTAAGCTAG
  • Download Fasta

  • Fasta :-

    MAETTIGFRCQDFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEY VKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDV ATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVKK RVVVSNNTFICKAVTKDGVERVQSVS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.10.5730115 SDVPASAEDD0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India