Tbg972.11.12640 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.12640OTHER0.9998850.0000300.000085
No Results

  • Fasta :-

    >Tbg972.11.12640 MNSEECTKRRIGMNFPPVKDRDDVLKAQKGAVTQEQIRDGMQDDTPPVVRSVLELAHLMM SGHSQKLRAAPGYQGGLFYSGSPFCFASGYRDGTRPRDMDEKGNHMKLKDPLTYGVLSLP ITAAYLCELHGTGVFDLHQPLRHYLPELEHKLDAEVTARSILSFRTVLNEQQIMKDAGVD RVRPHVTRNICAATQRYVYMPINCFFAGGSSAALSGQEQRENFVQYLRSSPSCTFKKVTT HRAYRCGVSHFSVALLVAAVERQLGGISFEASIRKVVFEPAQSHGAGYGPPKLWRDPNEI FYQPSGLALQHQGFVKPLAAGSLDNCGPPLLNSSLNLHAPVEDYGKLLLLSLDAIRHARK ELGEFDSNSGAIPSYPHYDFGVEWLDTGRRLQLTRRVLGIDYIPTASSFRYSCEHDLGCF GICNCGTRDACLLGNTISRVIQHLFVKHIIEKGVNPMKGPNLDNPNEGESETELKFRKVV DEQKYTSVFKKHDAHTRF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/550 Sequence name : 550 Sequence length : 498 VALUES OF COMPUTED PARAMETERS Coef20 : 3.505 CoefTot : -0.022 ChDiff : 5 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.418 0.278 0.552 MesoH : -0.578 0.171 -0.334 0.192 MuHd_075 : 33.915 11.811 8.836 5.739 MuHd_095 : 18.982 12.919 5.546 4.635 MuHd_100 : 13.858 11.923 3.612 4.639 MuHd_105 : 6.567 8.341 2.071 3.896 Hmax_075 : 4.813 4.317 0.088 1.943 Hmax_095 : -1.800 3.938 -0.887 1.950 Hmax_100 : -1.800 5.600 -2.513 2.580 Hmax_105 : -2.900 1.575 -1.703 1.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9419 0.0581 DFMC : 0.9433 0.0567
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 498 Tbg972.11.12640 MNSEECTKRRIGMNFPPVKDRDDVLKAQKGAVTQEQIRDGMQDDTPPVVRSVLELAHLMMSGHSQKLRAAPGYQGGLFYS 80 GSPFCFASGYRDGTRPRDMDEKGNHMKLKDPLTYGVLSLPITAAYLCELHGTGVFDLHQPLRHYLPELEHKLDAEVTARS 160 ILSFRTVLNEQQIMKDAGVDRVRPHVTRNICAATQRYVYMPINCFFAGGSSAALSGQEQRENFVQYLRSSPSCTFKKVTT 240 HRAYRCGVSHFSVALLVAAVERQLGGISFEASIRKVVFEPAQSHGAGYGPPKLWRDPNEIFYQPSGLALQHQGFVKPLAA 320 GSLDNCGPPLLNSSLNLHAPVEDYGKLLLLSLDAIRHARKELGEFDSNSGAIPSYPHYDFGVEWLDTGRRLQLTRRVLGI 400 DYIPTASSFRYSCEHDLGCFGICNCGTRDACLLGNTISRVIQHLFVKHIIEKGVNPMKGPNLDNPNEGESETELKFRKVV 480 DEQKYTSVFKKHDAHTRF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.12640 8 NSEECTK|RR 0.055 . Tbg972.11.12640 9 SEECTKR|RI 0.226 . Tbg972.11.12640 10 EECTKRR|IG 0.129 . Tbg972.11.12640 19 MNFPPVK|DR 0.091 . Tbg972.11.12640 21 FPPVKDR|DD 0.094 . Tbg972.11.12640 26 DRDDVLK|AQ 0.076 . Tbg972.11.12640 29 DVLKAQK|GA 0.068 . Tbg972.11.12640 38 VTQEQIR|DG 0.085 . Tbg972.11.12640 50 DTPPVVR|SV 0.140 . Tbg972.11.12640 66 MSGHSQK|LR 0.064 . Tbg972.11.12640 68 GHSQKLR|AA 0.195 . Tbg972.11.12640 91 CFASGYR|DG 0.087 . Tbg972.11.12640 95 GYRDGTR|PR 0.090 . Tbg972.11.12640 97 RDGTRPR|DM 0.186 . Tbg972.11.12640 102 PRDMDEK|GN 0.075 . Tbg972.11.12640 107 EKGNHMK|LK 0.072 . Tbg972.11.12640 109 GNHMKLK|DP 0.096 . Tbg972.11.12640 142 DLHQPLR|HY 0.106 . Tbg972.11.12640 151 LPELEHK|LD 0.061 . Tbg972.11.12640 159 DAEVTAR|SI 0.120 . Tbg972.11.12640 165 RSILSFR|TV 0.134 . Tbg972.11.12640 175 NEQQIMK|DA 0.087 . Tbg972.11.12640 181 KDAGVDR|VR 0.085 . Tbg972.11.12640 183 AGVDRVR|PH 0.070 . Tbg972.11.12640 188 VRPHVTR|NI 0.120 . Tbg972.11.12640 196 ICAATQR|YV 0.136 . Tbg972.11.12640 220 LSGQEQR|EN 0.091 . Tbg972.11.12640 228 NFVQYLR|SS 0.085 . Tbg972.11.12640 236 SPSCTFK|KV 0.122 . Tbg972.11.12640 237 PSCTFKK|VT 0.087 . Tbg972.11.12640 242 KKVTTHR|AY 0.126 . Tbg972.11.12640 245 TTHRAYR|CG 0.238 . Tbg972.11.12640 262 LVAAVER|QL 0.120 . Tbg972.11.12640 274 SFEASIR|KV 0.100 . Tbg972.11.12640 275 FEASIRK|VV 0.089 . Tbg972.11.12640 292 AGYGPPK|LW 0.067 . Tbg972.11.12640 295 GPPKLWR|DP 0.129 . Tbg972.11.12640 316 QHQGFVK|PL 0.072 . Tbg972.11.12640 346 PVEDYGK|LL 0.058 . Tbg972.11.12640 356 LSLDAIR|HA 0.106 . Tbg972.11.12640 359 DAIRHAR|KE 0.242 . Tbg972.11.12640 360 AIRHARK|EL 0.098 . Tbg972.11.12640 389 EWLDTGR|RL 0.066 . Tbg972.11.12640 390 WLDTGRR|LQ 0.076 . Tbg972.11.12640 395 RRLQLTR|RV 0.104 . Tbg972.11.12640 396 RLQLTRR|VL 0.128 . Tbg972.11.12640 410 PTASSFR|YS 0.100 . Tbg972.11.12640 428 ICNCGTR|DA 0.135 . Tbg972.11.12640 439 LGNTISR|VI 0.083 . Tbg972.11.12640 447 IQHLFVK|HI 0.078 . Tbg972.11.12640 452 VKHIIEK|GV 0.084 . Tbg972.11.12640 458 KGVNPMK|GP 0.063 . Tbg972.11.12640 475 ESETELK|FR 0.067 . Tbg972.11.12640 477 ETELKFR|KV 0.140 . Tbg972.11.12640 478 TELKFRK|VV 0.139 . Tbg972.11.12640 484 KVVDEQK|YT 0.068 . Tbg972.11.12640 490 KYTSVFK|KH 0.063 . Tbg972.11.12640 491 YTSVFKK|HD 0.146 . Tbg972.11.12640 497 KHDAHTR|F- 0.114 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.12640 ATGAACTCTGAAGAATGCACAAAGCGTCGAATTGGCATGAATTTTCCCCCTGTGAAGGAT CGCGACGACGTTCTCAAAGCACAGAAGGGGGCTGTCACGCAGGAGCAAATTCGTGACGGC ATGCAGGATGACACCCCTCCTGTGGTCCGCAGTGTTTTGGAATTGGCGCATCTGATGATG AGTGGGCACAGTCAGAAGCTGCGTGCGGCGCCAGGGTACCAAGGAGGTCTATTTTATTCC GGAAGCCCTTTCTGTTTCGCCAGTGGTTACCGCGACGGAACTCGGCCGCGCGACATGGAT GAAAAAGGTAATCACATGAAGCTGAAGGATCCCCTCACGTATGGTGTTCTTTCACTGCCT ATTACGGCGGCGTACCTCTGCGAGTTACACGGCACCGGTGTGTTTGACTTGCACCAGCCC CTACGACACTATTTGCCTGAGCTTGAACACAAACTCGACGCCGAAGTAACGGCGCGGAGC ATTCTCTCCTTTAGAACTGTTCTTAATGAGCAGCAAATAATGAAAGACGCGGGAGTTGAC AGGGTGCGGCCCCACGTTACACGGAACATCTGCGCTGCAACGCAACGCTATGTGTACATG CCAATAAACTGCTTTTTTGCAGGGGGGTCATCTGCGGCGCTCAGCGGGCAGGAGCAACGT GAAAATTTTGTACAGTACTTGCGCTCGTCACCTTCCTGCACGTTTAAGAAGGTCACTACT CATCGAGCTTACCGTTGTGGCGTGTCCCATTTCTCTGTAGCCCTGCTCGTGGCAGCCGTT GAGCGGCAACTGGGCGGGATCAGCTTTGAAGCCTCAATCCGGAAGGTAGTTTTCGAACCG GCTCAGAGCCACGGTGCGGGGTACGGGCCACCCAAGCTTTGGCGTGATCCCAATGAAATA TTCTACCAGCCGAGTGGTCTTGCACTGCAGCATCAGGGCTTTGTCAAACCGCTCGCTGCG GGTTCACTCGACAACTGTGGGCCGCCACTTTTGAACTCATCACTGAACCTTCACGCCCCC GTAGAGGATTACGGTAAATTACTCCTCTTATCTCTTGATGCTATTAGGCACGCGCGAAAG GAATTGGGTGAATTCGACTCTAACTCGGGGGCTATACCTTCGTACCCACATTACGACTTT GGCGTTGAGTGGTTGGACACTGGACGCAGACTTCAACTCACCCGACGAGTTTTGGGTATT GATTATATACCAACTGCATCGTCGTTCCGCTACAGCTGCGAACACGACTTGGGTTGTTTT GGTATATGTAACTGTGGCACACGCGATGCATGTCTTCTTGGAAACACCATCTCGCGCGTC ATCCAGCATCTTTTTGTAAAACACATCATTGAAAAGGGTGTCAACCCGATGAAGGGACCA AACCTCGACAACCCCAACGAAGGGGAAAGTGAAACGGAGCTGAAGTTCCGGAAGGTAGTA GACGAGCAGAAGTACACAAGTGTCTTCAAGAAACACGATGCGCATACACGATTTTAA
  • Download Fasta

  • Fasta :-

    MNSEECTKRRIGMNFPPVKDRDDVLKAQKGAVTQEQIRDGMQDDTPPVVRSVLELAHLMM SGHSQKLRAAPGYQGGLFYSGSPFCFASGYRDGTRPRDMDEKGNHMKLKDPLTYGVLSLP ITAAYLCELHGTGVFDLHQPLRHYLPELEHKLDAEVTARSILSFRTVLNEQQIMKDAGVD RVRPHVTRNICAATQRYVYMPINCFFAGGSSAALSGQEQRENFVQYLRSSPSCTFKKVTT HRAYRCGVSHFSVALLVAAVERQLGGISFEASIRKVVFEPAQSHGAGYGPPKLWRDPNEI FYQPSGLALQHQGFVKPLAAGSLDNCGPPLLNSSLNLHAPVEDYGKLLLLSLDAIRHARK ELGEFDSNSGAIPSYPHYDFGVEWLDTGRRLQLTRRVLGIDYIPTASSFRYSCEHDLGCF GICNCGTRDACLLGNTISRVIQHLFVKHIIEKGVNPMKGPNLDNPNEGESETELKFRKVV DEQKYTSVFKKHDAHTRF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.12640470 SNEGESETEL0.994unspTbg972.11.12640470 SNEGESETEL0.994unspTbg972.11.12640470 SNEGESETEL0.994unspTbg972.11.12640215 SSAALSGQEQ0.993unspTbg972.11.12640230 SYLRSSPSCT0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India