Tbg972.11.14050 | Der1-like family, putative

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Component_IDs:  GO:0097014      GO:0005737      GO:0005654      

  • Curated_GO_Components:  ciliary plasm      cytoplasm      nucleoplasm      

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.14050OTHER0.9999080.0000210.000071
No Results

  • Fasta :-

    >Tbg972.11.14050 MAQSFDDWLQSLNPVTKGVFAAAVLLTAAISMHIAPYTYFILDTSAIMGLQLWRPFTAAL FFGKFSFPWLIAMAMFVSYLKYNEEYDYQGKTADFAWMIILVVIGLTAGGLLLGLPVVSG ALLMALCWVFCKRHPQLRMKLYSFEFDAKTFPWVLALFHFILGQNILEDALGIVVGHLFF FLNDLIPLKHGTNPIATPSWFVRLTGLENGGVRFGGVHAGGQAFAARFARQPPPAAAGGR PHHWGPGHRLGTT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/425 Sequence name : 425 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.691 CoefTot : 0.098 ChDiff : 4 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.329 2.600 0.525 0.911 MesoH : 1.032 1.221 -0.016 0.534 MuHd_075 : 20.489 11.718 6.101 3.311 MuHd_095 : 33.724 20.291 8.155 5.847 MuHd_100 : 44.110 28.054 11.281 8.594 MuHd_105 : 45.939 30.746 12.207 9.831 Hmax_075 : 9.567 8.867 -0.418 3.862 Hmax_095 : 16.400 10.300 0.830 4.620 Hmax_100 : 18.400 14.900 1.572 5.900 Hmax_105 : 18.800 18.317 3.008 6.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7339 0.2661 DFMC : 0.8533 0.1467
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 Tbg972.11.14050 MAQSFDDWLQSLNPVTKGVFAAAVLLTAAISMHIAPYTYFILDTSAIMGLQLWRPFTAALFFGKFSFPWLIAMAMFVSYL 80 KYNEEYDYQGKTADFAWMIILVVIGLTAGGLLLGLPVVSGALLMALCWVFCKRHPQLRMKLYSFEFDAKTFPWVLALFHF 160 ILGQNILEDALGIVVGHLFFFLNDLIPLKHGTNPIATPSWFVRLTGLENGGVRFGGVHAGGQAFAARFARQPPPAAAGGR 240 PHHWGPGHRLGTT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.14050 17 SLNPVTK|GV 0.106 . Tbg972.11.14050 54 MGLQLWR|PF 0.090 . Tbg972.11.14050 64 AALFFGK|FS 0.073 . Tbg972.11.14050 81 MFVSYLK|YN 0.062 . Tbg972.11.14050 91 EYDYQGK|TA 0.065 . Tbg972.11.14050 132 LCWVFCK|RH 0.059 . Tbg972.11.14050 133 CWVFCKR|HP 0.115 . Tbg972.11.14050 138 KRHPQLR|MK 0.109 . Tbg972.11.14050 140 HPQLRMK|LY 0.075 . Tbg972.11.14050 149 SFEFDAK|TF 0.065 . Tbg972.11.14050 189 NDLIPLK|HG 0.057 . Tbg972.11.14050 203 TPSWFVR|LT 0.173 . Tbg972.11.14050 213 LENGGVR|FG 0.101 . Tbg972.11.14050 227 GQAFAAR|FA 0.193 . Tbg972.11.14050 230 FAARFAR|QP 0.314 . Tbg972.11.14050 240 PAAAGGR|PH 0.115 . Tbg972.11.14050 249 HWGPGHR|LG 0.084 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.14050 ATGGCCCAAAGCTTTGATGACTGGCTGCAGAGTTTGAATCCCGTAACGAAAGGCGTGTTC GCCGCCGCAGTCCTCCTGACGGCAGCCATTTCCATGCATATTGCACCTTATACATACTTT ATTTTGGATACCTCTGCGATTATGGGGCTGCAATTGTGGCGACCTTTCACAGCTGCGCTT TTCTTTGGTAAGTTCTCCTTCCCATGGTTAATTGCGATGGCAATGTTTGTTTCCTACCTC AAGTATAACGAGGAATACGACTACCAAGGGAAAACAGCAGATTTTGCGTGGATGATTATT CTTGTTGTTATTGGACTGACAGCAGGTGGGTTGTTGCTTGGGTTGCCCGTCGTTAGTGGT GCTCTGCTAATGGCACTGTGCTGGGTTTTTTGTAAGCGTCACCCGCAGCTGCGCATGAAA TTGTATAGCTTCGAGTTCGATGCGAAGACGTTTCCATGGGTGTTGGCCCTGTTTCACTTT ATTCTCGGTCAAAACATTCTTGAGGATGCGCTTGGTATCGTTGTGGGTCACCTCTTCTTT TTTCTTAACGATCTGATACCTTTGAAGCACGGAACAAACCCAATTGCGACACCCTCGTGG TTTGTGCGTCTCACAGGGCTTGAAAATGGCGGCGTGCGCTTTGGTGGCGTGCACGCGGGA GGACAGGCGTTTGCTGCCCGATTCGCGCGGCAACCACCACCAGCTGCCGCGGGCGGGCGG CCGCACCATTGGGGACCAGGTCACCGGCTTGGCACAACTTAA
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  • Fasta :-

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India