Tbg972.11.16520 | Metalloprotease M41 FtsH, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.16520OTHER0.9998400.0000750.000085
No Results

  • Fasta :-

    >Tbg972.11.16520 MQGEPRGAPGGQSLFEQMHQQHFAQPQGFSPQQHQIPQPAHYVPPQTSFTQPHGGQTYNQ PNNSYYPPAAPLQPPPFISPQQDSDYYKGFYDGVVKPSGPVVGNIVSWVAPLIVNIAIFV GPLWYVRRKYTQAMAQGAAGGAGKKPGMGNLMEMMNPMKPKNFRVDVKGTTFADIIGIPE AKEDLKQYVDFIKDPKKFTRLGARLPKGCLLTGSPGTGKTLLARAVAGEANAPFLSCSGA DFIEIFGGSGPKRVRELFAQAREAAPCIVFIDEIDAIGSRNQSGRSMGGGGSEENRTINQ LLAELDGLTSKEAIVVIAATNYPEVIDKALLREGRFDRKVNVPMPDRSARVELFEYYLKR IITGDAECKPKIQRFRTRKESEDGDNIKTESTASPKANDGKEKVASLTAEEKAPEVKVIP GVSNKEYAIALADRTPGVSPAQIATIVNEAALTSAVAECEVVPLKTLQESIDDVLIGKKH RQRMSDSSLERTAYHEVGHAIMAWTSPLQKDVLKISIIPRGRAGGYTQQMQDEAMEPRTD AFLFSQLCVLMGGRVAERIFMKDISTGAMDDLQRATRIAMEKLLLYGMSKSIGQLAFKAN ERNEGRGWMNFSEELHAKVEEEARHLVASAYKHTEKVLLEKRELHEKLTKLLLEKKELTK ADIEQILGPRPIVTDTS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/259 Sequence name : 259 Sequence length : 677 VALUES OF COMPUTED PARAMETERS Coef20 : 2.512 CoefTot : -0.405 ChDiff : 4 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.824 2.224 0.299 0.823 MesoH : -0.138 0.383 -0.270 0.295 MuHd_075 : 20.013 13.992 5.794 4.471 MuHd_095 : 18.096 14.049 6.182 5.102 MuHd_100 : 25.171 18.109 6.903 6.564 MuHd_105 : 27.503 18.353 6.256 6.636 Hmax_075 : 12.250 5.717 0.518 4.270 Hmax_095 : 13.900 6.900 1.826 4.860 Hmax_100 : 6.100 6.000 -0.415 3.780 Hmax_105 : 7.613 6.912 -0.466 3.867 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9857 0.0143 DFMC : 0.9921 0.0079
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 677 Tbg972.11.16520 MQGEPRGAPGGQSLFEQMHQQHFAQPQGFSPQQHQIPQPAHYVPPQTSFTQPHGGQTYNQPNNSYYPPAAPLQPPPFISP 80 QQDSDYYKGFYDGVVKPSGPVVGNIVSWVAPLIVNIAIFVGPLWYVRRKYTQAMAQGAAGGAGKKPGMGNLMEMMNPMKP 160 KNFRVDVKGTTFADIIGIPEAKEDLKQYVDFIKDPKKFTRLGARLPKGCLLTGSPGTGKTLLARAVAGEANAPFLSCSGA 240 DFIEIFGGSGPKRVRELFAQAREAAPCIVFIDEIDAIGSRNQSGRSMGGGGSEENRTINQLLAELDGLTSKEAIVVIAAT 320 NYPEVIDKALLREGRFDRKVNVPMPDRSARVELFEYYLKRIITGDAECKPKIQRFRTRKESEDGDNIKTESTASPKANDG 400 KEKVASLTAEEKAPEVKVIPGVSNKEYAIALADRTPGVSPAQIATIVNEAALTSAVAECEVVPLKTLQESIDDVLIGKKH 480 RQRMSDSSLERTAYHEVGHAIMAWTSPLQKDVLKISIIPRGRAGGYTQQMQDEAMEPRTDAFLFSQLCVLMGGRVAERIF 560 MKDISTGAMDDLQRATRIAMEKLLLYGMSKSIGQLAFKANERNEGRGWMNFSEELHAKVEEEARHLVASAYKHTEKVLLE 640 KRELHEKLTKLLLEKKELTKADIEQILGPRPIVTDTS 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ..................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.16520 6 -MQGEPR|GA 0.146 . Tbg972.11.16520 88 QDSDYYK|GF 0.090 . Tbg972.11.16520 96 FYDGVVK|PS 0.068 . Tbg972.11.16520 127 GPLWYVR|RK 0.077 . Tbg972.11.16520 128 PLWYVRR|KY 0.185 . Tbg972.11.16520 129 LWYVRRK|YT 0.107 . Tbg972.11.16520 144 AAGGAGK|KP 0.073 . Tbg972.11.16520 145 AGGAGKK|PG 0.092 . Tbg972.11.16520 159 EMMNPMK|PK 0.061 . Tbg972.11.16520 161 MNPMKPK|NF 0.077 . Tbg972.11.16520 164 MKPKNFR|VD 0.096 . Tbg972.11.16520 168 NFRVDVK|GT 0.071 . Tbg972.11.16520 182 IGIPEAK|ED 0.062 . Tbg972.11.16520 186 EAKEDLK|QY 0.062 . Tbg972.11.16520 193 QYVDFIK|DP 0.064 . Tbg972.11.16520 196 DFIKDPK|KF 0.058 . Tbg972.11.16520 197 FIKDPKK|FT 0.107 . Tbg972.11.16520 200 DPKKFTR|LG 0.089 . Tbg972.11.16520 204 FTRLGAR|LP 0.082 . Tbg972.11.16520 207 LGARLPK|GC 0.103 . Tbg972.11.16520 219 GSPGTGK|TL 0.057 . Tbg972.11.16520 224 GKTLLAR|AV 0.126 . Tbg972.11.16520 252 FGGSGPK|RV 0.070 . Tbg972.11.16520 253 GGSGPKR|VR 0.157 . Tbg972.11.16520 255 SGPKRVR|EL 0.099 . Tbg972.11.16520 262 ELFAQAR|EA 0.107 . Tbg972.11.16520 280 IDAIGSR|NQ 0.073 . Tbg972.11.16520 285 SRNQSGR|SM 0.481 . Tbg972.11.16520 296 GGSEENR|TI 0.124 . Tbg972.11.16520 311 LDGLTSK|EA 0.069 . Tbg972.11.16520 328 YPEVIDK|AL 0.065 . Tbg972.11.16520 332 IDKALLR|EG 0.071 . Tbg972.11.16520 335 ALLREGR|FD 0.245 . Tbg972.11.16520 338 REGRFDR|KV 0.335 . Tbg972.11.16520 339 EGRFDRK|VN 0.071 . Tbg972.11.16520 347 NVPMPDR|SA 0.129 . Tbg972.11.16520 350 MPDRSAR|VE 0.210 . Tbg972.11.16520 359 LFEYYLK|RI 0.060 . Tbg972.11.16520 360 FEYYLKR|II 0.167 . Tbg972.11.16520 369 TGDAECK|PK 0.066 . Tbg972.11.16520 371 DAECKPK|IQ 0.060 . Tbg972.11.16520 374 CKPKIQR|FR 0.092 . Tbg972.11.16520 376 PKIQRFR|TR 0.101 . Tbg972.11.16520 378 IQRFRTR|KE 0.125 . Tbg972.11.16520 379 QRFRTRK|ES 0.415 . Tbg972.11.16520 388 EDGDNIK|TE 0.064 . Tbg972.11.16520 396 ESTASPK|AN 0.077 . Tbg972.11.16520 401 PKANDGK|EK 0.075 . Tbg972.11.16520 403 ANDGKEK|VA 0.069 . Tbg972.11.16520 412 SLTAEEK|AP 0.061 . Tbg972.11.16520 417 EKAPEVK|VI 0.063 . Tbg972.11.16520 425 IPGVSNK|EY 0.073 . Tbg972.11.16520 434 AIALADR|TP 0.098 . Tbg972.11.16520 465 CEVVPLK|TL 0.063 . Tbg972.11.16520 478 DDVLIGK|KH 0.058 . Tbg972.11.16520 479 DVLIGKK|HR 0.068 . Tbg972.11.16520 481 LIGKKHR|QR 0.080 . Tbg972.11.16520 483 GKKHRQR|MS 0.128 . Tbg972.11.16520 491 SDSSLER|TA 0.127 . Tbg972.11.16520 510 WTSPLQK|DV 0.086 . Tbg972.11.16520 514 LQKDVLK|IS 0.060 . Tbg972.11.16520 520 KISIIPR|GR 0.124 . Tbg972.11.16520 522 SIIPRGR|AG 0.100 . Tbg972.11.16520 538 DEAMEPR|TD 0.084 . Tbg972.11.16520 554 CVLMGGR|VA 0.081 . Tbg972.11.16520 558 GGRVAER|IF 0.097 . Tbg972.11.16520 562 AERIFMK|DI 0.124 . Tbg972.11.16520 574 AMDDLQR|AT 0.085 . Tbg972.11.16520 577 DLQRATR|IA 0.283 . Tbg972.11.16520 582 TRIAMEK|LL 0.068 . Tbg972.11.16520 590 LLYGMSK|SI 0.090 . Tbg972.11.16520 598 IGQLAFK|AN 0.070 . Tbg972.11.16520 602 AFKANER|NE 0.089 . Tbg972.11.16520 606 NERNEGR|GW 0.092 . Tbg972.11.16520 618 SEELHAK|VE 0.076 . Tbg972.11.16520 624 KVEEEAR|HL 0.087 . Tbg972.11.16520 632 LVASAYK|HT 0.081 . Tbg972.11.16520 636 AYKHTEK|VL 0.060 . Tbg972.11.16520 641 EKVLLEK|RE 0.057 . Tbg972.11.16520 642 KVLLEKR|EL 0.151 . Tbg972.11.16520 647 KRELHEK|LT 0.061 . Tbg972.11.16520 650 LHEKLTK|LL 0.058 . Tbg972.11.16520 655 TKLLLEK|KE 0.056 . Tbg972.11.16520 656 KLLLEKK|EL 0.085 . Tbg972.11.16520 660 EKKELTK|AD 0.064 . Tbg972.11.16520 670 EQILGPR|PI 0.073 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.16520 ATGCAGGGAGAACCGCGTGGTGCGCCCGGTGGGCAGTCGCTGTTTGAACAAATGCATCAG CAGCATTTCGCGCAGCCGCAGGGGTTTTCGCCCCAACAGCATCAAATTCCTCAACCAGCA CATTATGTACCCCCTCAAACCTCATTTACCCAACCGCATGGTGGCCAAACGTACAACCAA CCAAATAATTCGTATTATCCACCAGCGGCTCCGCTCCAGCCACCACCTTTTATTTCTCCC CAGCAGGACAGTGATTACTACAAGGGATTTTACGACGGCGTAGTGAAACCATCGGGACCT GTCGTCGGTAATATAGTCAGTTGGGTGGCACCGCTGATTGTTAATATTGCCATATTCGTT GGTCCATTGTGGTATGTGCGACGGAAATACACGCAGGCTATGGCCCAAGGCGCAGCTGGT GGGGCAGGGAAGAAACCTGGAATGGGGAATTTGATGGAAATGATGAACCCCATGAAACCA AAGAATTTTCGCGTTGATGTGAAGGGTACCACCTTCGCAGATATTATCGGCATTCCTGAG GCGAAAGAGGATTTGAAGCAATATGTTGACTTCATCAAGGACCCCAAAAAATTTACAAGG CTTGGCGCTCGGCTTCCAAAGGGGTGCCTGCTAACGGGAAGCCCCGGTACGGGAAAAACA TTACTCGCCCGAGCCGTTGCTGGTGAGGCGAATGCGCCCTTTCTCAGTTGCTCAGGGGCT GACTTTATCGAAATTTTTGGTGGAAGCGGACCAAAGCGCGTTCGTGAACTTTTTGCACAA GCACGAGAGGCTGCACCCTGCATTGTTTTCATTGACGAAATTGACGCCATTGGCTCTCGT AACCAAAGTGGTCGGAGTATGGGAGGTGGAGGTAGTGAAGAAAACCGTACTATTAACCAA CTTCTTGCGGAGTTGGACGGTTTGACGAGTAAGGAGGCAATTGTAGTTATTGCGGCGACA AACTACCCCGAAGTCATTGACAAGGCTCTTCTACGCGAGGGTCGCTTTGATCGTAAGGTG AATGTCCCAATGCCTGACAGATCGGCGCGAGTTGAGTTATTTGAGTACTACTTGAAGCGC ATCATAACTGGTGACGCGGAGTGTAAACCAAAGATACAGCGCTTCCGAACTCGTAAGGAA AGCGAAGACGGGGACAACATTAAAACAGAATCCACAGCTTCCCCAAAGGCAAACGATGGA AAAGAGAAAGTAGCTTCGCTTACCGCGGAGGAGAAGGCACCCGAAGTCAAAGTGATTCCC GGGGTGAGCAATAAAGAATACGCCATAGCTCTTGCGGATCGCACTCCCGGTGTATCGCCA GCTCAAATTGCTACAATTGTTAACGAGGCTGCACTCACCTCTGCAGTTGCGGAATGTGAG GTGGTCCCGTTGAAAACCCTTCAGGAAAGCATCGACGATGTCCTCATCGGAAAAAAACAC CGGCAGCGTATGAGTGACAGCTCATTGGAACGGACCGCCTACCACGAAGTTGGCCATGCG ATTATGGCGTGGACATCACCACTACAGAAGGATGTTTTAAAGATATCAATCATTCCTCGA GGTAGAGCTGGTGGATACACGCAACAAATGCAGGACGAAGCGATGGAGCCTCGCACAGAT GCCTTTTTGTTTTCTCAACTTTGTGTGCTGATGGGCGGTCGTGTGGCTGAGCGTATTTTC ATGAAGGACATATCAACAGGTGCTATGGATGATCTCCAACGTGCGACGCGTATTGCCATG GAGAAGCTTCTTCTTTATGGAATGTCTAAGTCCATCGGTCAGCTTGCCTTCAAAGCGAAC GAAAGAAATGAGGGCCGCGGTTGGATGAACTTTTCAGAAGAACTACATGCGAAAGTGGAA GAGGAAGCGCGGCATCTCGTCGCTTCGGCCTATAAACATACAGAGAAGGTTCTCTTGGAG AAACGTGAGCTTCATGAAAAGCTTACGAAACTTTTACTGGAAAAGAAGGAGCTAACGAAA GCCGACATTGAGCAGATCCTCGGTCCTCGTCCAATAGTCACTGATACCAGCTAG
  • Download Fasta

  • Fasta :-

    MQGEPRGAPGGQSLFEQMHQQHFAQPQGFSPQQHQIPQPAHYVPPQTSFTQPHGGQTYNQ PNNSYYPPAAPLQPPPFISPQQDSDYYKGFYDGVVKPSGPVVGNIVSWVAPLIVNIAIFV GPLWYVRRKYTQAMAQGAAGGAGKKPGMGNLMEMMNPMKPKNFRVDVKGTTFADIIGIPE AKEDLKQYVDFIKDPKKFTRLGARLPKGCLLTGSPGTGKTLLARAVAGEANAPFLSCSGA DFIEIFGGSGPKRVRELFAQAREAAPCIVFIDEIDAIGSRNQSGRSMGGGGSEENRTINQ LLAELDGLTSKEAIVVIAATNYPEVIDKALLREGRFDRKVNVPMPDRSARVELFEYYLKR IITGDAECKPKIQRFRTRKESEDGDNIKTESTASPKANDGKEKVASLTAEEKAPEVKVIP GVSNKEYAIALADRTPGVSPAQIATIVNEAALTSAVAECEVVPLKTLQESIDDVLIGKKH RQRMSDSSLERTAYHEVGHAIMAWTSPLQKDVLKISIIPRGRAGGYTQQMQDEAMEPRTD AFLFSQLCVLMGGRVAERIFMKDISTGAMDDLQRATRIAMEKLLLYGMSKSIGQLAFKAN ERNEGRGWMNFSEELHAKVEEEARHLVASAYKHTEKVLLEKRELHEKLTKLLLEKKELTK ADIEQILGPRPIVTDTS

  • title: ATP binding site
  • coordinates: S214,P215,G216,T217,G218,K219,T220,L221,D272,N321
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.16520488 SMSDSSLERT0.997unspTbg972.11.16520488 SMSDSSLERT0.997unspTbg972.11.16520488 SMSDSSLERT0.997unspTbg972.11.16520381 STRKESEDGD0.991unspTbg972.11.16520394 SESTASPKAN0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India