Tbg972.11.18530 | enoyl-CoA hydratase/isomerase family protein, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.18530OTHER0.8722670.0006180.127115
No Results

  • Fasta :-

    >Tbg972.11.18530 MRCTLPVCSKGLFWRDFPNTRLVTLNREKALNALNLEMVREMSLAYFHEHHPKGDNALFV VKGMGEKSFCAGGDIVMITTDNSVVNEFFYREYQLNHRILTMPNPQVSLWNGYVMGGGVG ISVHGRYRVASERAIFAMPENGIGLFPDVGASWFLPRLKLPGFGLYLGLTGGRVKGADLV HLGLATHYVPAASFEQLEDRLCHIEDSTKVDACLNEFAVKDLPPFTLEEHRPLIEKVFTL MDTSTVEDVMGSLAADGGEFARTAISTMEKLSPTSLKLALKMQQMGAKATDPAEVFSTDY VGAIRTHACGDFPEGVRALLIDKTKDPKWNPGKLSDVTPEHLAKFFEPLGPDMRKWHPTE PY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/521 Sequence name : 521 Sequence length : 362 VALUES OF COMPUTED PARAMETERS Coef20 : 4.218 CoefTot : 0.010 ChDiff : -6 ZoneTo : 15 KR : 3 DE : 0 CleavSite : 25 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.041 0.113 0.581 MesoH : -0.070 0.465 -0.252 0.319 MuHd_075 : 32.496 17.875 10.408 5.771 MuHd_095 : 9.402 10.414 4.792 2.220 MuHd_100 : 11.318 3.670 3.490 1.681 MuHd_105 : 23.320 6.298 3.853 4.612 Hmax_075 : 16.600 17.000 5.359 5.300 Hmax_095 : 8.575 11.638 2.284 3.894 Hmax_100 : 4.900 6.400 0.516 3.220 Hmax_105 : 13.600 8.750 1.414 4.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2608 0.7392 DFMC : 0.2567 0.7433 This protein is probably imported in mitochondria. f(Ser) = 0.0667 f(Arg) = 0.1333 CMi = 0.25974 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 362 Tbg972.11.18530 MRCTLPVCSKGLFWRDFPNTRLVTLNREKALNALNLEMVREMSLAYFHEHHPKGDNALFVVKGMGEKSFCAGGDIVMITT 80 DNSVVNEFFYREYQLNHRILTMPNPQVSLWNGYVMGGGVGISVHGRYRVASERAIFAMPENGIGLFPDVGASWFLPRLKL 160 PGFGLYLGLTGGRVKGADLVHLGLATHYVPAASFEQLEDRLCHIEDSTKVDACLNEFAVKDLPPFTLEEHRPLIEKVFTL 240 MDTSTVEDVMGSLAADGGEFARTAISTMEKLSPTSLKLALKMQQMGAKATDPAEVFSTDYVGAIRTHACGDFPEGVRALL 320 IDKTKDPKWNPGKLSDVTPEHLAKFFEPLGPDMRKWHPTEPY 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.18530 2 -----MR|CT 0.091 . Tbg972.11.18530 10 TLPVCSK|GL 0.063 . Tbg972.11.18530 15 SKGLFWR|DF 0.117 . Tbg972.11.18530 21 RDFPNTR|LV 0.089 . Tbg972.11.18530 27 RLVTLNR|EK 0.068 . Tbg972.11.18530 29 VTLNREK|AL 0.059 . Tbg972.11.18530 40 LNLEMVR|EM 0.077 . Tbg972.11.18530 53 FHEHHPK|GD 0.075 . Tbg972.11.18530 62 NALFVVK|GM 0.068 . Tbg972.11.18530 67 VKGMGEK|SF 0.090 . Tbg972.11.18530 91 VNEFFYR|EY 0.078 . Tbg972.11.18530 98 EYQLNHR|IL 0.076 . Tbg972.11.18530 126 GISVHGR|YR 0.163 . Tbg972.11.18530 128 SVHGRYR|VA 0.096 . Tbg972.11.18530 133 YRVASER|AI 0.119 . Tbg972.11.18530 157 ASWFLPR|LK 0.096 . Tbg972.11.18530 159 WFLPRLK|LP 0.062 . Tbg972.11.18530 173 LGLTGGR|VK 0.081 . Tbg972.11.18530 175 LTGGRVK|GA 0.072 . Tbg972.11.18530 200 FEQLEDR|LC 0.087 . Tbg972.11.18530 209 HIEDSTK|VD 0.054 . Tbg972.11.18530 220 LNEFAVK|DL 0.068 . Tbg972.11.18530 231 FTLEEHR|PL 0.088 . Tbg972.11.18530 236 HRPLIEK|VF 0.057 . Tbg972.11.18530 262 DGGEFAR|TA 0.101 . Tbg972.11.18530 270 AISTMEK|LS 0.067 . Tbg972.11.18530 277 LSPTSLK|LA 0.080 . Tbg972.11.18530 281 SLKLALK|MQ 0.062 . Tbg972.11.18530 288 MQQMGAK|AT 0.095 . Tbg972.11.18530 305 DYVGAIR|TH 0.065 . Tbg972.11.18530 317 DFPEGVR|AL 0.060 . Tbg972.11.18530 323 RALLIDK|TK 0.056 . Tbg972.11.18530 325 LLIDKTK|DP 0.069 . Tbg972.11.18530 328 DKTKDPK|WN 0.064 . Tbg972.11.18530 333 PKWNPGK|LS 0.067 . Tbg972.11.18530 344 TPEHLAK|FF 0.102 . Tbg972.11.18530 354 PLGPDMR|KW 0.099 . Tbg972.11.18530 355 LGPDMRK|WH 0.074 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.18530 ATGCGTTGCACGCTTCCGGTATGTTCAAAGGGGTTGTTCTGGAGGGACTTTCCGAACACC CGTTTGGTTACGTTGAATCGTGAAAAAGCGCTAAATGCTCTTAACCTGGAGATGGTGAGG GAAATGTCTTTGGCTTATTTCCACGAACACCACCCGAAGGGGGACAACGCTCTGTTTGTT GTGAAGGGCATGGGTGAGAAAAGCTTCTGTGCGGGTGGCGATATCGTCATGATTACTACA GACAACAGCGTAGTGAACGAGTTCTTTTACCGGGAGTATCAATTAAACCATCGTATCCTC ACTATGCCAAACCCACAAGTGTCATTATGGAACGGCTACGTAATGGGCGGAGGTGTTGGC ATCTCAGTTCATGGTCGGTATCGTGTGGCGTCAGAACGCGCTATTTTTGCCATGCCTGAG AATGGTATTGGGCTTTTTCCCGATGTGGGCGCCTCTTGGTTCCTGCCGCGGCTGAAATTG CCTGGTTTTGGACTGTACCTCGGCCTCACGGGAGGACGTGTGAAGGGAGCGGATTTGGTG CATCTCGGCCTCGCCACTCATTATGTCCCCGCCGCCTCCTTCGAGCAACTGGAGGACCGG TTGTGTCATATCGAAGACTCCACAAAAGTCGATGCATGTTTGAACGAATTCGCTGTGAAG GATCTGCCACCTTTCACTTTGGAGGAACACCGCCCTCTTATAGAAAAGGTTTTTACGCTG ATGGATACCTCTACGGTGGAGGATGTTATGGGGTCGCTTGCTGCAGACGGTGGTGAGTTT GCACGCACTGCCATCTCCACAATGGAAAAATTATCTCCAACAAGTCTTAAGCTCGCCCTG AAGATGCAGCAGATGGGCGCGAAGGCAACAGATCCTGCAGAGGTTTTCAGCACCGATTAC GTGGGTGCCATTCGTACTCATGCCTGTGGTGACTTCCCTGAGGGAGTGCGGGCTTTGCTT ATTGACAAAACAAAGGATCCCAAGTGGAATCCTGGAAAGCTGTCAGACGTAACTCCCGAA CATTTGGCGAAGTTCTTTGAACCCTTGGGGCCTGATATGCGGAAATGGCATCCCACAGAG CCGTACTAG
  • Download Fasta

  • Fasta :-

    MRCTLPVCSKGLFWRDFPNTRLVTLNREKALNALNLEMVREMSLAYFHEHHPKGDNALFV VKGMGEKSFCAGGDIVMITTDNSVVNEFFYREYQLNHRILTMPNPQVSLWNGYVMGGGVG ISVHGRYRVASERAIFAMPENGIGLFPDVGASWFLPRLKLPGFGLYLGLTGGRVKGADLV HLGLATHYVPAASFEQLEDRLCHIEDSTKVDACLNEFAVKDLPPFTLEEHRPLIEKVFTL MDTSTVEDVMGSLAADGGEFARTAISTMEKLSPTSLKLALKMQQMGAKATDPAEVFSTDY VGAIRTHACGDFPEGVRALLIDKTKDPKWNPGKLSDVTPEHLAKFFEPLGPDMRKWHPTE PY

    No Results
  • title: substrate binding site
  • coordinates: L31,A33,K67,A71,G72,G73,D74,I75,Y113,M115,G116,G117,P139,E140,I143
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.18530131 SYRVASERAI0.995unspTbg972.11.18530272 SMEKLSPTSL0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India