Tbg972.11.2720 | metallo-peptidase, Clan MF, Family M17

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.2720OTHER0.9993470.0000690.000585
No Results

  • Fasta :-

    >Tbg972.11.2720 MPATLKRQRSNSVYEESNLSSFVDSCVNFVPNVTFHTTTEGKHMAKVLTSNSAPQPHTIL LLGTRQQLKSKGLSQLFPYHKPELDQLIDEIDEASFRSDGYRCGTNHELRITLGVIAGAF SRHNCPLRPDSITNIVKEAVAYAKKVKGVTAASGALDIYCCEAENVLCVAAAVARGANQS FSAKNGYAEKSYWNRGIPVRVVFAPDTRKQSLSEASDTFACGKREYLDAAALSIQLCQRL VDSPCNLLDTTTFTEIAAGHIAKLKNKLKRNVSIDIISGEDLREKGYGGIYGVGKAAEYP PHLVTLSYEPNAAGGSGINPQEKLAFVGKGIVYDTGGLSIKPTTGMCGMKHDMGGAAAVF CGFIGLAMIGVPHRISSILCLADNAVGPRSQRNDDIVRMRSGKTVEINNTDAEGRLVLGD GVYHASALLPYTPDVIVDMATLTGAQGIATGRYHAALYASSEEIENRVLQAGRRCGDLCF PVVFCPEFQCPEFRSSVADSRNSVLNRSNAQVSCAGYFVGSHIDSKYKGDWAHVDLAAPA ARDDATGFGVTLLLQTFAASLFGTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/708 Sequence name : 708 Sequence length : 565 VALUES OF COMPUTED PARAMETERS Coef20 : 4.047 CoefTot : -0.055 ChDiff : 1 ZoneTo : 14 KR : 3 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.247 2.165 0.501 0.814 MesoH : 0.253 0.651 -0.112 0.350 MuHd_075 : 14.119 8.627 4.983 2.405 MuHd_095 : 14.993 12.795 4.383 3.033 MuHd_100 : 5.040 9.066 2.722 1.795 MuHd_105 : 7.222 5.953 2.680 0.095 Hmax_075 : -2.300 -2.333 -3.135 -0.320 Hmax_095 : -7.963 -1.137 -3.850 -0.473 Hmax_100 : -4.300 -0.500 -3.083 0.240 Hmax_105 : -8.867 -1.633 -2.782 -1.027 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8841 0.1159 DFMC : 0.8422 0.1578
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 565 Tbg972.11.2720 MPATLKRQRSNSVYEESNLSSFVDSCVNFVPNVTFHTTTEGKHMAKVLTSNSAPQPHTILLLGTRQQLKSKGLSQLFPYH 80 KPELDQLIDEIDEASFRSDGYRCGTNHELRITLGVIAGAFSRHNCPLRPDSITNIVKEAVAYAKKVKGVTAASGALDIYC 160 CEAENVLCVAAAVARGANQSFSAKNGYAEKSYWNRGIPVRVVFAPDTRKQSLSEASDTFACGKREYLDAAALSIQLCQRL 240 VDSPCNLLDTTTFTEIAAGHIAKLKNKLKRNVSIDIISGEDLREKGYGGIYGVGKAAEYPPHLVTLSYEPNAAGGSGINP 320 QEKLAFVGKGIVYDTGGLSIKPTTGMCGMKHDMGGAAAVFCGFIGLAMIGVPHRISSILCLADNAVGPRSQRNDDIVRMR 400 SGKTVEINNTDAEGRLVLGDGVYHASALLPYTPDVIVDMATLTGAQGIATGRYHAALYASSEEIENRVLQAGRRCGDLCF 480 PVVFCPEFQCPEFRSSVADSRNSVLNRSNAQVSCAGYFVGSHIDSKYKGDWAHVDLAAPAARDDATGFGVTLLLQTFAAS 560 LFGTA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.2720 6 -MPATLK|RQ 0.051 . Tbg972.11.2720 7 MPATLKR|QR 0.226 . Tbg972.11.2720 9 ATLKRQR|SN 0.151 . Tbg972.11.2720 42 HTTTEGK|HM 0.068 . Tbg972.11.2720 46 EGKHMAK|VL 0.062 . Tbg972.11.2720 65 ILLLGTR|QQ 0.070 . Tbg972.11.2720 69 GTRQQLK|SK 0.086 . Tbg972.11.2720 71 RQQLKSK|GL 0.088 . Tbg972.11.2720 81 QLFPYHK|PE 0.062 . Tbg972.11.2720 97 IDEASFR|SD 0.122 . Tbg972.11.2720 102 FRSDGYR|CG 0.114 . Tbg972.11.2720 110 GTNHELR|IT 0.114 . Tbg972.11.2720 122 IAGAFSR|HN 0.107 . Tbg972.11.2720 128 RHNCPLR|PD 0.095 . Tbg972.11.2720 137 SITNIVK|EA 0.061 . Tbg972.11.2720 144 EAVAYAK|KV 0.082 . Tbg972.11.2720 145 AVAYAKK|VK 0.090 . Tbg972.11.2720 147 AYAKKVK|GV 0.107 . Tbg972.11.2720 175 VAAAVAR|GA 0.213 . Tbg972.11.2720 184 NQSFSAK|NG 0.074 . Tbg972.11.2720 190 KNGYAEK|SY 0.074 . Tbg972.11.2720 195 EKSYWNR|GI 0.108 . Tbg972.11.2720 200 NRGIPVR|VV 0.120 . Tbg972.11.2720 208 VFAPDTR|KQ 0.082 . Tbg972.11.2720 209 FAPDTRK|QS 0.066 . Tbg972.11.2720 223 DTFACGK|RE 0.054 . Tbg972.11.2720 224 TFACGKR|EY 0.160 . Tbg972.11.2720 239 SIQLCQR|LV 0.097 . Tbg972.11.2720 263 AAGHIAK|LK 0.067 . Tbg972.11.2720 265 GHIAKLK|NK 0.061 . Tbg972.11.2720 267 IAKLKNK|LK 0.061 . Tbg972.11.2720 269 KLKNKLK|RN 0.061 . Tbg972.11.2720 270 LKNKLKR|NV 0.421 . Tbg972.11.2720 283 ISGEDLR|EK 0.094 . Tbg972.11.2720 285 GEDLREK|GY 0.074 . Tbg972.11.2720 295 GIYGVGK|AA 0.078 . Tbg972.11.2720 323 GINPQEK|LA 0.081 . Tbg972.11.2720 329 KLAFVGK|GI 0.074 . Tbg972.11.2720 341 TGGLSIK|PT 0.070 . Tbg972.11.2720 350 TGMCGMK|HD 0.074 . Tbg972.11.2720 374 MIGVPHR|IS 0.087 . Tbg972.11.2720 389 DNAVGPR|SQ 0.104 . Tbg972.11.2720 392 VGPRSQR|ND 0.240 . Tbg972.11.2720 398 RNDDIVR|MR 0.084 . Tbg972.11.2720 400 DDIVRMR|SG 0.144 . Tbg972.11.2720 403 VRMRSGK|TV 0.340 . Tbg972.11.2720 415 NTDAEGR|LV 0.093 . Tbg972.11.2720 452 QGIATGR|YH 0.083 . Tbg972.11.2720 467 SEEIENR|VL 0.106 . Tbg972.11.2720 473 RVLQAGR|RC 0.081 . Tbg972.11.2720 474 VLQAGRR|CG 0.108 . Tbg972.11.2720 494 FQCPEFR|SS 0.106 . Tbg972.11.2720 501 SSVADSR|NS 0.071 . Tbg972.11.2720 507 RNSVLNR|SN 0.205 . Tbg972.11.2720 526 GSHIDSK|YK 0.081 . Tbg972.11.2720 528 HIDSKYK|GD 0.069 . Tbg972.11.2720 542 LAAPAAR|DD 0.154 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.2720 ATGCCTGCAACCCTCAAGCGGCAACGCAGCAACTCGGTTTATGAGGAAAGCAACTTGTCG AGCTTTGTTGACAGTTGCGTTAACTTTGTGCCAAATGTAACGTTTCACACCACAACTGAA GGAAAGCATATGGCCAAAGTTCTCACCTCCAACAGCGCACCTCAACCCCACACTATTCTT CTTCTTGGAACTCGCCAGCAGCTGAAAAGTAAAGGACTCAGCCAGTTATTCCCATACCAC AAACCTGAGCTAGATCAACTAATCGACGAAATCGACGAGGCAAGCTTCAGGAGTGATGGC TACCGGTGTGGCACTAACCACGAGTTACGTATTACACTTGGAGTCATAGCAGGAGCCTTC TCCCGCCATAACTGTCCTCTTCGCCCCGACTCCATCACCAACATTGTGAAGGAAGCCGTG GCATATGCCAAGAAAGTAAAGGGTGTCACAGCAGCCTCAGGTGCGCTCGATATTTACTGT TGCGAAGCCGAAAACGTGCTTTGCGTGGCGGCTGCCGTTGCGCGTGGCGCCAATCAAAGT TTTTCTGCAAAGAATGGTTACGCTGAGAAGTCGTACTGGAATCGTGGCATTCCTGTCCGA GTCGTGTTTGCCCCAGACACGCGAAAGCAGAGCCTCAGCGAGGCAAGTGACACTTTTGCA TGTGGAAAGCGGGAGTACCTCGATGCGGCAGCTCTCTCCATTCAGCTTTGTCAACGCTTG GTTGATTCTCCTTGCAACCTACTGGACACAACGACTTTCACGGAGATCGCTGCTGGACAC ATCGCTAAACTGAAAAATAAGTTGAAGCGCAACGTTTCCATTGACATCATCAGTGGAGAG GATCTGCGGGAGAAAGGATATGGTGGAATTTATGGTGTTGGAAAGGCAGCGGAATATCCA CCGCACTTGGTAACGTTGTCCTACGAGCCCAATGCGGCCGGGGGCAGCGGCATAAATCCC CAAGAAAAATTGGCCTTTGTTGGAAAGGGTATTGTATACGACACTGGCGGTCTCTCCATT AAACCCACGACGGGCATGTGTGGGATGAAGCACGATATGGGCGGTGCGGCTGCTGTCTTT TGTGGGTTTATTGGACTTGCAATGATCGGCGTCCCTCACCGTATTTCGTCCATTCTGTGC CTTGCTGACAATGCTGTTGGACCCCGCTCTCAGCGCAATGACGATATTGTGCGGATGAGA TCAGGGAAAACTGTGGAAATCAATAACACAGATGCTGAAGGTCGACTGGTACTTGGTGAT GGAGTTTACCACGCCTCGGCTCTTCTGCCTTATACGCCTGATGTTATTGTGGACATGGCG ACGCTTACGGGAGCTCAGGGTATTGCCACTGGCCGCTATCATGCCGCATTATATGCCAGT AGTGAGGAAATTGAAAACCGCGTCCTTCAGGCGGGACGCCGCTGTGGTGACCTCTGTTTC CCTGTTGTTTTCTGTCCAGAATTCCAGTGCCCCGAGTTCAGAAGCAGTGTAGCAGACAGC CGTAACTCCGTGCTGAATCGCTCGAATGCACAAGTTAGCTGCGCCGGTTACTTTGTTGGG AGTCACATAGACAGCAAATACAAGGGGGATTGGGCACACGTCGACCTCGCAGCACCTGCT GCCCGCGATGACGCCACAGGTTTCGGTGTAACATTACTCCTACAAACCTTTGCAGCCTCA CTCTTTGGGACAGCATAA
  • Download Fasta

  • Fasta :-

    MPATLKRQRSNSVYEESNLSSFVDSCVNFVPNVTFHTTTEGKHMAKVLTSNSAPQPHTIL LLGTRQQLKSKGLSQLFPYHKPELDQLIDEIDEASFRSDGYRCGTNHELRITLGVIAGAF SRHNCPLRPDSITNIVKEAVAYAKKVKGVTAASGALDIYCCEAENVLCVAAAVARGANQS FSAKNGYAEKSYWNRGIPVRVVFAPDTRKQSLSEASDTFACGKREYLDAAALSIQLCQRL VDSPCNLLDTTTFTEIAAGHIAKLKNKLKRNVSIDIISGEDLREKGYGGIYGVGKAAEYP PHLVTLSYEPNAAGGSGINPQEKLAFVGKGIVYDTGGLSIKPTTGMCGMKHDMGGAAAVF CGFIGLAMIGVPHRISSILCLADNAVGPRSQRNDDIVRMRSGKTVEINNTDAEGRLVLGD GVYHASALLPYTPDVIVDMATLTGAQGIATGRYHAALYASSEEIENRVLQAGRRCGDLCF PVVFCPEFQCPEFRSSVADSRNSVLNRSNAQVSCAGYFVGSHIDSKYKGDWAHVDLAAPA ARDDATGFGVTLLLQTFAASLFGTA

  • title: Substrate-binding/catalytic site
  • coordinates: K329,D334,K341,D352,D411,E413,R415,L442
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.2720211 STRKQSLSEA0.996unspTbg972.11.2720211 STRKQSLSEA0.996unspTbg972.11.2720211 STRKQSLSEA0.996unspTbg972.11.2720278 SIDIISGEDL0.995unspTbg972.11.2720390 SVGPRSQRND0.994unspTbg972.11.2720401 SVRMRSGKTV0.992unspTbg972.11.2720460 SALYASSEEI0.99unspTbg972.11.2720496 SEFRSSVADS0.998unspTbg972.11.2720521 SYFVGSHIDS0.992unspTbg972.11.272012 SQRSNSVYEE0.998unspTbg972.11.2720131 SLRPDSITNI0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India