Tbg972.11.2740 | Metallocarboxypeptidase 1

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.2740OTHER0.9996970.0000270.000275
No Results

  • Fasta :-

    >Tbg972.11.2740 MKAYKELERVFTKLYRYEHFMNLAGWDMQAIMPPNAMEARGAAIAELEVLMHGEITNPKV KTFIEEAEGSVGELNELQRANLREIRRSWEKVNRLPEAFVERKALLTSNSQQLWKKCREE NDFAGFLPTFKELVELYREEGKLLAGTTGVHPYEALVDVYEPGMTLKQLDIIFENVKSWL PNLLKEVLEKQKSLNASIVQPKGPFPIAKQETLGRACMKLWKFNFDGGRLDVSAHPFCGN VKEDVRITTSYNENDFAKSLFGVIHETGHAKYEQNLGPVEFTTQPVCRARSLGVHESQSL FAEMQIGLSGAFMNALSPMLVEHFGEQPAFTPTNMKRVLQQVQPSLIRIEADELCYPLHV ILRCEIERDLIDRKIEAEDVPRAWNEKMKAYFGLETLGNDKEGCLQDIHWFGGAFGYFPT YLLGAMLAAQLMHTVRRELGENVVEDCLMKADLDVIFAKQKEKIWRHGSSLLTEELIKQA TGEPLNPQYHREHLERRYRDDAN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/872 Sequence name : 872 Sequence length : 503 VALUES OF COMPUTED PARAMETERS Coef20 : 3.711 CoefTot : -0.242 ChDiff : -12 ZoneTo : 5 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.747 1.176 0.186 0.664 MesoH : -0.451 0.228 -0.418 0.202 MuHd_075 : 13.814 8.870 3.340 2.120 MuHd_095 : 42.467 23.980 11.675 10.460 MuHd_100 : 47.770 26.745 12.535 11.930 MuHd_105 : 48.831 27.476 12.493 11.878 Hmax_075 : -9.333 1.400 -4.897 1.120 Hmax_095 : 4.600 11.600 -0.167 4.640 Hmax_100 : 4.600 11.600 -0.167 4.640 Hmax_105 : 12.100 13.800 1.889 5.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1956 0.8044 DFMC : 0.3984 0.6016 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.0000 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 503 Tbg972.11.2740 MKAYKELERVFTKLYRYEHFMNLAGWDMQAIMPPNAMEARGAAIAELEVLMHGEITNPKVKTFIEEAEGSVGELNELQRA 80 NLREIRRSWEKVNRLPEAFVERKALLTSNSQQLWKKCREENDFAGFLPTFKELVELYREEGKLLAGTTGVHPYEALVDVY 160 EPGMTLKQLDIIFENVKSWLPNLLKEVLEKQKSLNASIVQPKGPFPIAKQETLGRACMKLWKFNFDGGRLDVSAHPFCGN 240 VKEDVRITTSYNENDFAKSLFGVIHETGHAKYEQNLGPVEFTTQPVCRARSLGVHESQSLFAEMQIGLSGAFMNALSPML 320 VEHFGEQPAFTPTNMKRVLQQVQPSLIRIEADELCYPLHVILRCEIERDLIDRKIEAEDVPRAWNEKMKAYFGLETLGND 400 KEGCLQDIHWFGGAFGYFPTYLLGAMLAAQLMHTVRRELGENVVEDCLMKADLDVIFAKQKEKIWRHGSSLLTEELIKQA 480 TGEPLNPQYHREHLERRYRDDAN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.2740 2 -----MK|AY 0.072 . Tbg972.11.2740 5 --MKAYK|EL 0.075 . Tbg972.11.2740 9 AYKELER|VF 0.072 . Tbg972.11.2740 13 LERVFTK|LY 0.067 . Tbg972.11.2740 16 VFTKLYR|YE 0.076 . Tbg972.11.2740 40 PNAMEAR|GA 0.184 . Tbg972.11.2740 59 GEITNPK|VK 0.063 . Tbg972.11.2740 61 ITNPKVK|TF 0.069 . Tbg972.11.2740 79 ELNELQR|AN 0.089 . Tbg972.11.2740 83 LQRANLR|EI 0.082 . Tbg972.11.2740 86 ANLREIR|RS 0.169 . Tbg972.11.2740 87 NLREIRR|SW 0.341 . Tbg972.11.2740 91 IRRSWEK|VN 0.061 . Tbg972.11.2740 94 SWEKVNR|LP 0.091 . Tbg972.11.2740 102 PEAFVER|KA 0.084 . Tbg972.11.2740 103 EAFVERK|AL 0.087 . Tbg972.11.2740 115 NSQQLWK|KC 0.064 . Tbg972.11.2740 116 SQQLWKK|CR 0.102 . Tbg972.11.2740 118 QLWKKCR|EE 0.091 . Tbg972.11.2740 131 GFLPTFK|EL 0.055 . Tbg972.11.2740 138 ELVELYR|EE 0.093 . Tbg972.11.2740 142 LYREEGK|LL 0.061 . Tbg972.11.2740 167 EPGMTLK|QL 0.080 . Tbg972.11.2740 177 IIFENVK|SW 0.070 . Tbg972.11.2740 185 WLPNLLK|EV 0.070 . Tbg972.11.2740 190 LKEVLEK|QK 0.063 . Tbg972.11.2740 192 EVLEKQK|SL 0.087 . Tbg972.11.2740 202 ASIVQPK|GP 0.081 . Tbg972.11.2740 209 GPFPIAK|QE 0.079 . Tbg972.11.2740 215 KQETLGR|AC 0.084 . Tbg972.11.2740 219 LGRACMK|LW 0.074 . Tbg972.11.2740 222 ACMKLWK|FN 0.077 . Tbg972.11.2740 229 FNFDGGR|LD 0.069 . Tbg972.11.2740 242 PFCGNVK|ED 0.057 . Tbg972.11.2740 246 NVKEDVR|IT 0.073 . Tbg972.11.2740 258 NENDFAK|SL 0.144 . Tbg972.11.2740 271 HETGHAK|YE 0.069 . Tbg972.11.2740 288 TTQPVCR|AR 0.137 . Tbg972.11.2740 290 QPVCRAR|SL 0.299 . Tbg972.11.2740 336 FTPTNMK|RV 0.064 . Tbg972.11.2740 337 TPTNMKR|VL 0.297 . Tbg972.11.2740 348 VQPSLIR|IE 0.071 . Tbg972.11.2740 363 PLHVILR|CE 0.072 . Tbg972.11.2740 368 LRCEIER|DL 0.103 . Tbg972.11.2740 373 ERDLIDR|KI 0.097 . Tbg972.11.2740 374 RDLIDRK|IE 0.064 . Tbg972.11.2740 382 EAEDVPR|AW 0.096 . Tbg972.11.2740 387 PRAWNEK|MK 0.066 . Tbg972.11.2740 389 AWNEKMK|AY 0.091 . Tbg972.11.2740 401 ETLGNDK|EG 0.053 . Tbg972.11.2740 436 QLMHTVR|RE 0.074 . Tbg972.11.2740 437 LMHTVRR|EL 0.239 . Tbg972.11.2740 450 VEDCLMK|AD 0.062 . Tbg972.11.2740 459 LDVIFAK|QK 0.086 . Tbg972.11.2740 461 VIFAKQK|EK 0.061 . Tbg972.11.2740 463 FAKQKEK|IW 0.066 . Tbg972.11.2740 466 QKEKIWR|HG 0.113 . Tbg972.11.2740 478 LTEELIK|QA 0.063 . Tbg972.11.2740 491 LNPQYHR|EH 0.069 . Tbg972.11.2740 496 HREHLER|RY 0.102 . Tbg972.11.2740 497 REHLERR|YR 0.197 . Tbg972.11.2740 499 HLERRYR|DD 0.276 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.2740 ATGAAGGCATACAAAGAGCTCGAGCGCGTCTTCACTAAACTATACCGCTATGAGCACTTC ATGAACCTTGCTGGTTGGGATATGCAAGCCATCATGCCCCCCAATGCAATGGAAGCACGT GGTGCAGCAATTGCGGAATTGGAAGTGCTCATGCACGGAGAGATTACCAACCCCAAAGTG AAGACATTCATTGAGGAAGCGGAGGGCTCTGTGGGGGAACTTAATGAACTTCAACGGGCC AATTTGCGAGAAATCCGCCGAAGTTGGGAGAAGGTCAATCGCCTTCCTGAGGCATTTGTG GAACGTAAGGCCCTCCTAACGTCCAACTCACAACAACTGTGGAAGAAGTGCCGGGAGGAA AATGATTTCGCTGGGTTTCTTCCCACGTTTAAAGAACTCGTCGAGCTGTATCGTGAGGAG GGAAAGCTTCTTGCAGGAACCACCGGCGTGCACCCGTACGAGGCCCTTGTTGACGTCTAT GAACCTGGCATGACGCTTAAGCAACTGGACATAATATTCGAAAATGTGAAGTCATGGCTA CCCAACCTCTTGAAAGAAGTTTTGGAGAAGCAGAAATCACTTAACGCATCTATTGTGCAA CCCAAGGGACCATTCCCTATTGCTAAGCAAGAAACTCTCGGACGTGCGTGCATGAAGTTG TGGAAGTTTAACTTTGATGGCGGCCGACTGGACGTAAGCGCTCACCCATTTTGTGGTAAC GTCAAGGAGGATGTGCGCATTACGACCAGCTACAATGAAAACGATTTCGCCAAAAGCCTC TTTGGTGTCATCCACGAAACTGGGCACGCAAAGTACGAACAAAATTTGGGTCCTGTCGAG TTCACCACCCAACCTGTGTGTAGGGCCCGTTCTCTAGGGGTACACGAAAGCCAATCGCTC TTTGCGGAAATGCAAATTGGACTCTCGGGTGCCTTTATGAACGCGCTTTCCCCTATGCTC GTGGAGCACTTTGGCGAGCAACCCGCCTTCACTCCAACAAACATGAAGAGAGTGTTGCAG CAGGTGCAACCAAGCCTTATTCGCATTGAGGCCGATGAGCTCTGCTACCCCCTGCACGTC ATCTTGCGTTGTGAGATCGAGCGTGACTTAATCGACCGTAAAATCGAAGCAGAGGATGTT CCTCGTGCATGGAATGAGAAGATGAAGGCCTATTTTGGCCTTGAAACCCTCGGTAATGAC AAGGAGGGTTGCTTGCAAGATATTCACTGGTTTGGTGGGGCATTTGGTTACTTCCCCACT TACCTCCTGGGTGCCATGCTTGCGGCGCAACTGATGCATACCGTACGGCGGGAGCTCGGG GAAAACGTTGTGGAAGACTGCCTCATGAAAGCAGACCTCGACGTAATCTTTGCGAAGCAG AAGGAGAAGATCTGGCGTCATGGAAGTTCTCTCTTAACAGAAGAACTCATCAAGCAAGCC ACCGGCGAACCGCTCAATCCGCAATACCACCGAGAGCACTTGGAGCGTCGCTACCGTGAC GATGCCAACTGA
  • Download Fasta

  • Fasta :-

    MKAYKELERVFTKLYRYEHFMNLAGWDMQAIMPPNAMEARGAAIAELEVLMHGEITNPKV KTFIEEAEGSVGELNELQRANLREIRRSWEKVNRLPEAFVERKALLTSNSQQLWKKCREE NDFAGFLPTFKELVELYREEGKLLAGTTGVHPYEALVDVYEPGMTLKQLDIIFENVKSWL PNLLKEVLEKQKSLNASIVQPKGPFPIAKQETLGRACMKLWKFNFDGGRLDVSAHPFCGN VKEDVRITTSYNENDFAKSLFGVIHETGHAKYEQNLGPVEFTTQPVCRARSLGVHESQSL FAEMQIGLSGAFMNALSPMLVEHFGEQPAFTPTNMKRVLQQVQPSLIRIEADELCYPLHV ILRCEIERDLIDRKIEAEDVPRAWNEKMKAYFGLETLGNDKEGCLQDIHWFGGAFGYFPT YLLGAMLAAQLMHTVRRELGENVVEDCLMKADLDVIFAKQKEKIWRHGSSLLTEELIKQA TGEPLNPQYHREHLERRYRDDAN

    No Results
  • title: metal binding site
  • coordinates: H265,H269,E296
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.11.274088 SEIRRSWEKV0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India