Tbg972.11.4220 | Alpha/beta hydrolase family, putative

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.4220OTHER0.8438540.0010590.155087
No Results

  • Fasta :-

    >Tbg972.11.4220 MKTLAKKTLQGGVSGKCGSQIIIAHGLLGNSTNWMSVGRRLAAHDGVRGRLEEIHMLDMR NHGESPHFNAHTNATMASDIEHFVLQQQRQWQSRAGAEGDGGIVLIGHSMGGFAVMGSML RRANETSLLLQSGVEELEQRCKRGDYYGWCDEQGNAAEMRAVNRAMGLPETQPLYDILYD CKGDNVARPPRVKAVVIVDITPSTALGTHRQHGQSSSETLDAMVAADLSRVHSFGDGNAE LERVGVSNKAMRDFLLTNLRLDPRTKEATWRCNLPVLRADYNSIALGVSGWFLSASEKVS RDRGGELVAPLRCSLPTLFVFGQNSPYNTPEDRRLIPRFFSNAIEVEVEGAGHFVHYEKM QEFVNVVVPFLTEYL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/345 Sequence name : 345 Sequence length : 375 VALUES OF COMPUTED PARAMETERS Coef20 : 3.465 CoefTot : -1.366 ChDiff : -3 ZoneTo : 44 KR : 6 DE : 0 CleavSite : 49 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.476 0.213 0.676 MesoH : -0.848 0.039 -0.457 0.125 MuHd_075 : 38.513 28.786 11.422 7.579 MuHd_095 : 19.621 15.573 5.182 5.459 MuHd_100 : 26.419 17.622 6.588 6.893 MuHd_105 : 29.491 20.363 7.843 7.414 Hmax_075 : 13.600 22.283 6.127 5.215 Hmax_095 : 7.875 9.188 -0.077 4.296 Hmax_100 : 14.400 9.900 0.815 4.870 Hmax_105 : 7.600 8.400 2.606 3.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2943 0.7057 DFMC : 0.1224 0.8776 This protein is probably imported in mitochondria. f(Ser) = 0.0909 f(Arg) = 0.0455 CMi = 0.68027 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 375 Tbg972.11.4220 MKTLAKKTLQGGVSGKCGSQIIIAHGLLGNSTNWMSVGRRLAAHDGVRGRLEEIHMLDMRNHGESPHFNAHTNATMASDI 80 EHFVLQQQRQWQSRAGAEGDGGIVLIGHSMGGFAVMGSMLRRANETSLLLQSGVEELEQRCKRGDYYGWCDEQGNAAEMR 160 AVNRAMGLPETQPLYDILYDCKGDNVARPPRVKAVVIVDITPSTALGTHRQHGQSSSETLDAMVAADLSRVHSFGDGNAE 240 LERVGVSNKAMRDFLLTNLRLDPRTKEATWRCNLPVLRADYNSIALGVSGWFLSASEKVSRDRGGELVAPLRCSLPTLFV 320 FGQNSPYNTPEDRRLIPRFFSNAIEVEVEGAGHFVHYEKMQEFVNVVVPFLTEYL 400 ................................................................................ 80 ..............................................................P................. 160 ................................................................................ 240 ................................................................................ 320 ....................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.4220 2 -----MK|TL 0.069 . Tbg972.11.4220 6 -MKTLAK|KT 0.070 . Tbg972.11.4220 7 MKTLAKK|TL 0.101 . Tbg972.11.4220 16 QGGVSGK|CG 0.080 . Tbg972.11.4220 39 NWMSVGR|RL 0.088 . Tbg972.11.4220 40 WMSVGRR|LA 0.154 . Tbg972.11.4220 48 AAHDGVR|GR 0.093 . Tbg972.11.4220 50 HDGVRGR|LE 0.097 . Tbg972.11.4220 60 IHMLDMR|NH 0.098 . Tbg972.11.4220 89 FVLQQQR|QW 0.076 . Tbg972.11.4220 94 QRQWQSR|AG 0.130 . Tbg972.11.4220 121 VMGSMLR|RA 0.066 . Tbg972.11.4220 122 MGSMLRR|AN 0.262 . Tbg972.11.4220 140 VEELEQR|CK 0.072 . Tbg972.11.4220 142 ELEQRCK|RG 0.058 . Tbg972.11.4220 143 LEQRCKR|GD 0.598 *ProP* Tbg972.11.4220 160 GNAAEMR|AV 0.187 . Tbg972.11.4220 164 EMRAVNR|AM 0.114 . Tbg972.11.4220 182 DILYDCK|GD 0.061 . Tbg972.11.4220 188 KGDNVAR|PP 0.083 . Tbg972.11.4220 191 NVARPPR|VK 0.226 . Tbg972.11.4220 193 ARPPRVK|AV 0.084 . Tbg972.11.4220 210 TALGTHR|QH 0.109 . Tbg972.11.4220 230 VAADLSR|VH 0.083 . Tbg972.11.4220 243 GNAELER|VG 0.069 . Tbg972.11.4220 249 RVGVSNK|AM 0.068 . Tbg972.11.4220 252 VSNKAMR|DF 0.091 . Tbg972.11.4220 260 FLLTNLR|LD 0.061 . Tbg972.11.4220 264 NLRLDPR|TK 0.083 . Tbg972.11.4220 266 RLDPRTK|EA 0.062 . Tbg972.11.4220 271 TKEATWR|CN 0.117 . Tbg972.11.4220 278 CNLPVLR|AD 0.078 . Tbg972.11.4220 298 FLSASEK|VS 0.066 . Tbg972.11.4220 301 ASEKVSR|DR 0.149 . Tbg972.11.4220 303 EKVSRDR|GG 0.088 . Tbg972.11.4220 312 ELVAPLR|CS 0.079 . Tbg972.11.4220 333 YNTPEDR|RL 0.080 . Tbg972.11.4220 334 NTPEDRR|LI 0.097 . Tbg972.11.4220 338 DRRLIPR|FF 0.154 . Tbg972.11.4220 359 HFVHYEK|MQ 0.066 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.4220 ATGAAAACTTTAGCCAAGAAAACACTGCAAGGAGGTGTTTCAGGGAAATGCGGCTCACAG ATCATCATAGCGCATGGCCTGTTGGGCAACAGCACCAACTGGATGTCGGTGGGACGTCGG CTTGCTGCACATGATGGGGTACGCGGAAGGCTTGAGGAAATCCACATGCTTGACATGCGG AATCACGGAGAGAGTCCCCACTTCAATGCACACACAAATGCAACGATGGCATCGGACATC GAGCACTTTGTACTTCAGCAACAAAGGCAGTGGCAATCTCGAGCGGGGGCGGAAGGTGAC GGGGGAATAGTGTTAATCGGGCACAGTATGGGCGGATTTGCCGTAATGGGTTCGATGCTT CGCCGTGCTAATGAGACCTCGCTGCTGTTGCAGTCGGGTGTGGAGGAACTCGAGCAGCGC TGCAAACGTGGTGACTACTACGGTTGGTGTGACGAACAAGGGAATGCAGCGGAGATGCGG GCTGTGAACCGTGCGATGGGTTTGCCGGAGACGCAACCGTTATACGACATATTGTATGAC TGCAAGGGAGACAACGTTGCTCGTCCCCCGCGTGTGAAGGCGGTCGTCATTGTGGACATT ACACCATCCACTGCCTTGGGGACACATCGGCAGCATGGTCAAAGCTCATCGGAGACGCTT GATGCCATGGTGGCTGCTGACTTGTCTCGGGTACATAGTTTTGGTGATGGGAATGCAGAA CTTGAGCGAGTGGGTGTTTCGAATAAGGCAATGCGTGATTTCCTGCTGACAAACCTTCGC CTCGATCCAAGAACAAAGGAGGCAACGTGGCGGTGCAACCTGCCAGTCCTTCGCGCAGAC TATAATTCTATTGCACTAGGGGTTTCTGGTTGGTTTCTCTCTGCAAGTGAGAAAGTCTCA CGTGACCGAGGCGGTGAGTTGGTGGCTCCGTTGAGGTGTTCGCTGCCTACATTGTTCGTT TTTGGGCAAAATTCACCCTACAACACACCTGAGGACCGTCGCCTCATTCCTCGGTTTTTC TCAAATGCGATTGAAGTTGAGGTGGAGGGCGCTGGCCACTTTGTCCACTACGAAAAAATG CAAGAGTTTGTGAACGTCGTAGTGCCGTTTTTGACGGAGTATTTGTAA
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  • Fasta :-

    MKTLAKKTLQGGVSGKCGSQIIIAHGLLGNSTNWMSVGRRLAAHDGVRGRLEEIHMLDMR NHGESPHFNAHTNATMASDIEHFVLQQQRQWQSRAGAEGDGGIVLIGHSMGGFAVMGSML RRANETSLLLQSGVEELEQRCKRGDYYGWCDEQGNAAEMRAVNRAMGLPETQPLYDILYD CKGDNVARPPRVKAVVIVDITPSTALGTHRQHGQSSSETLDAMVAADLSRVHSFGDGNAE LERVGVSNKAMRDFLLTNLRLDPRTKEATWRCNLPVLRADYNSIALGVSGWFLSASEKVS RDRGGELVAPLRCSLPTLFVFGQNSPYNTPEDRRLIPRFFSNAIEVEVEGAGHFVHYEKM QEFVNVVVPFLTEYL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.4220215 SQHGQSSSET0.995unspTbg972.11.4220233 SSRVHSFGDG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India