Tbg972.11.4600 | mitochondrial processing peptidase alpha subunit

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005739      

  • Curated_GO_Components:  mitochondrion      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.4600OTHER0.5382240.0716580.390118
No Results

  • Fasta :-

    >Tbg972.11.4600 MYRRAVAAAIPAVTAKNARSISQYNFGQNPLTESWSPTGRSTPAAAGSAAQSAGIGEAKT TLLPNGTRIITQQRGGPVVSIGAYILAGPAYDPVGCPGLHHLMHTALTTSNYNNSLFQLD RSIRSTGASFSHFEKDKYYIGLRLDARVDMWKSNTSGATSDAKRFDLNLLQDTIFTAISA PRFHEPDLERFRDTIDNNLKELRWQRPAQYAIQQLETVAFYKEPLGNPRHVPEWSNGRIA SKALLDQYARYVTPDRVVVAGVNMEHDELVAEYESNPYPHSSNAPHHAAFAKGLGKPAFD ITNEHSQYSGGELHEHEDRPKEMCTKPDMDTETAIAVGYLAFGRSKTSLQRYAATLVYQQ LFNIVIHDSLRYEQDVVLDGVRSFYLPYHSAGLVGFTAITSPENAVPLVKATMKGIQNVK FDNAALLEAAKHRAAVELTSQCWDSSRDICDYLGTSLSLDAKASNSTQYLNPSEVLAAVR NVTASELKEVKECMMGSKPSLFGHGEMLAFPSLRQLGA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/92 Sequence name : 92 Sequence length : 518 VALUES OF COMPUTED PARAMETERS Coef20 : 4.918 CoefTot : -3.879 ChDiff : -3 ZoneTo : 133 KR : 10 DE : 4 CleavSite : 126 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.171 0.215 0.615 MesoH : 0.006 0.329 -0.225 0.241 MuHd_075 : 40.752 24.954 10.490 8.814 MuHd_095 : 35.269 26.128 9.091 8.215 MuHd_100 : 36.460 24.069 9.175 8.284 MuHd_105 : 38.304 23.131 9.938 8.987 Hmax_075 : 13.700 10.733 2.309 4.630 Hmax_095 : 10.675 15.200 0.438 5.210 Hmax_100 : 15.200 16.800 2.602 6.430 Hmax_105 : 10.150 13.475 1.900 4.891 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1523 0.8477 DFMC : 0.1409 0.8591 This protein is probably imported in mitochondria. f(Ser) = 0.1053 f(Arg) = 0.0602 CMi = 0.68259 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 518 Tbg972.11.4600 MYRRAVAAAIPAVTAKNARSISQYNFGQNPLTESWSPTGRSTPAAAGSAAQSAGIGEAKTTLLPNGTRIITQQRGGPVVS 80 IGAYILAGPAYDPVGCPGLHHLMHTALTTSNYNNSLFQLDRSIRSTGASFSHFEKDKYYIGLRLDARVDMWKSNTSGATS 160 DAKRFDLNLLQDTIFTAISAPRFHEPDLERFRDTIDNNLKELRWQRPAQYAIQQLETVAFYKEPLGNPRHVPEWSNGRIA 240 SKALLDQYARYVTPDRVVVAGVNMEHDELVAEYESNPYPHSSNAPHHAAFAKGLGKPAFDITNEHSQYSGGELHEHEDRP 320 KEMCTKPDMDTETAIAVGYLAFGRSKTSLQRYAATLVYQQLFNIVIHDSLRYEQDVVLDGVRSFYLPYHSAGLVGFTAIT 400 SPENAVPLVKATMKGIQNVKFDNAALLEAAKHRAAVELTSQCWDSSRDICDYLGTSLSLDAKASNSTQYLNPSEVLAAVR 480 NVTASELKEVKECMMGSKPSLFGHGEMLAFPSLRQLGA 560 ................................................................................ 80 ...........................................P.................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.4600 3 ----MYR|RA 0.088 . Tbg972.11.4600 4 ---MYRR|AV 0.267 . Tbg972.11.4600 16 IPAVTAK|NA 0.090 . Tbg972.11.4600 19 VTAKNAR|SI 0.270 . Tbg972.11.4600 40 SWSPTGR|ST 0.204 . Tbg972.11.4600 59 AGIGEAK|TT 0.059 . Tbg972.11.4600 68 LLPNGTR|II 0.099 . Tbg972.11.4600 74 RIITQQR|GG 0.079 . Tbg972.11.4600 121 SLFQLDR|SI 0.145 . Tbg972.11.4600 124 QLDRSIR|ST 0.646 *ProP* Tbg972.11.4600 135 SFSHFEK|DK 0.086 . Tbg972.11.4600 137 SHFEKDK|YY 0.073 . Tbg972.11.4600 143 KYYIGLR|LD 0.072 . Tbg972.11.4600 147 GLRLDAR|VD 0.088 . Tbg972.11.4600 152 ARVDMWK|SN 0.091 . Tbg972.11.4600 163 GATSDAK|RF 0.060 . Tbg972.11.4600 164 ATSDAKR|FD 0.199 . Tbg972.11.4600 182 TAISAPR|FH 0.120 . Tbg972.11.4600 190 HEPDLER|FR 0.096 . Tbg972.11.4600 192 PDLERFR|DT 0.097 . Tbg972.11.4600 200 TIDNNLK|EL 0.067 . Tbg972.11.4600 203 NNLKELR|WQ 0.094 . Tbg972.11.4600 206 KELRWQR|PA 0.267 . Tbg972.11.4600 222 ETVAFYK|EP 0.059 . Tbg972.11.4600 229 EPLGNPR|HV 0.100 . Tbg972.11.4600 238 PEWSNGR|IA 0.114 . Tbg972.11.4600 242 NGRIASK|AL 0.067 . Tbg972.11.4600 250 LLDQYAR|YV 0.119 . Tbg972.11.4600 256 RYVTPDR|VV 0.117 . Tbg972.11.4600 292 HHAAFAK|GL 0.109 . Tbg972.11.4600 296 FAKGLGK|PA 0.077 . Tbg972.11.4600 319 LHEHEDR|PK 0.082 . Tbg972.11.4600 321 EHEDRPK|EM 0.068 . Tbg972.11.4600 326 PKEMCTK|PD 0.070 . Tbg972.11.4600 344 GYLAFGR|SK 0.103 . Tbg972.11.4600 346 LAFGRSK|TS 0.056 . Tbg972.11.4600 351 SKTSLQR|YA 0.099 . Tbg972.11.4600 371 VIHDSLR|YE 0.094 . Tbg972.11.4600 382 VVLDGVR|SF 0.076 . Tbg972.11.4600 410 NAVPLVK|AT 0.076 . Tbg972.11.4600 414 LVKATMK|GI 0.074 . Tbg972.11.4600 420 KGIQNVK|FD 0.066 . Tbg972.11.4600 431 ALLEAAK|HR 0.066 . Tbg972.11.4600 433 LEAAKHR|AA 0.143 . Tbg972.11.4600 447 QCWDSSR|DI 0.170 . Tbg972.11.4600 462 SLSLDAK|AS 0.068 . Tbg972.11.4600 480 EVLAAVR|NV 0.107 . Tbg972.11.4600 488 VTASELK|EV 0.071 . Tbg972.11.4600 491 SELKEVK|EC 0.057 . Tbg972.11.4600 498 ECMMGSK|PS 0.061 . Tbg972.11.4600 514 LAFPSLR|QL 0.132 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.4600 ATGTACCGACGCGCCGTTGCTGCTGCCATACCCGCCGTCACTGCCAAGAATGCACGGTCA ATCTCGCAGTACAACTTTGGTCAGAACCCCCTGACTGAGTCGTGGTCACCGACTGGCCGC TCAACTCCCGCGGCAGCCGGTTCTGCTGCGCAGTCAGCTGGCATTGGTGAGGCGAAGACG ACGCTACTCCCTAATGGAACCCGAATCATCACGCAGCAGCGAGGTGGTCCTGTGGTGTCA ATCGGCGCCTATATTCTTGCGGGTCCTGCTTACGATCCAGTTGGCTGTCCGGGCCTTCAT CATCTGATGCATACCGCACTCACGACAAGCAACTACAATAACTCACTCTTCCAACTGGAC CGCAGTATTCGCAGTACTGGTGCTTCGTTCTCTCACTTTGAGAAAGATAAGTACTACATC GGGCTTCGACTTGATGCTCGTGTTGACATGTGGAAGAGTAATACAAGCGGTGCAACAAGC GATGCGAAGCGGTTTGATCTTAACCTCTTACAAGATACAATATTCACCGCGATTTCTGCT CCAAGATTCCACGAACCGGATTTGGAGCGCTTTCGGGACACAATTGATAACAACCTGAAG GAGTTACGTTGGCAGCGCCCAGCGCAGTATGCTATTCAACAACTTGAAACCGTTGCATTT TACAAGGAGCCGCTGGGTAACCCCCGCCACGTTCCAGAGTGGAGTAACGGGCGCATTGCA AGCAAGGCTTTGCTCGATCAGTATGCCAGATATGTAACTCCAGATCGTGTCGTTGTTGCC GGTGTCAATATGGAGCACGATGAACTCGTCGCCGAGTATGAAAGCAACCCATATCCGCAT TCTAGCAACGCCCCGCACCACGCCGCGTTTGCCAAGGGTCTGGGCAAACCTGCTTTTGAC ATCACGAATGAACACTCCCAGTACAGCGGCGGTGAACTCCACGAACACGAAGACCGGCCA AAGGAAATGTGTACGAAACCAGATATGGACACCGAGACCGCCATTGCAGTCGGTTATCTT GCGTTTGGTCGCTCCAAAACGTCCTTGCAGCGCTATGCGGCCACTCTTGTTTACCAACAG CTGTTCAACATAGTCATCCACGACAGTTTACGCTACGAGCAAGATGTCGTGCTGGACGGT GTGCGATCGTTTTACCTACCGTATCACTCTGCTGGACTTGTGGGATTCACCGCTATAACC TCGCCAGAAAATGCTGTGCCGCTGGTTAAAGCGACAATGAAGGGCATTCAGAACGTGAAA TTTGATAATGCAGCACTATTGGAAGCAGCCAAGCACCGCGCTGCGGTTGAACTAACAAGT CAGTGCTGGGATTCGTCTCGCGACATATGTGACTATCTGGGCACAAGTTTGTCTCTTGAC GCCAAGGCTTCCAACTCAACACAATACTTAAATCCCTCAGAGGTGCTAGCGGCTGTTCGC AACGTCACAGCCAGTGAGTTGAAAGAAGTGAAAGAGTGCATGATGGGCTCAAAACCCTCA CTGTTTGGGCACGGGGAGATGTTGGCCTTCCCTTCACTCCGTCAGTTGGGAGCGTAA
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.4600401 STAITSPENA0.992unspTbg972.11.4600445 SQCWDSSRDI0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India