Tbg972.11.4780 | Metallopeptidase family M24, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005634      

  • Curated_GO_Components:  nucleus      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.4780OTHER0.9663600.0000990.033541
No Results

  • Fasta :-

    >Tbg972.11.4780 MGRGYSNSRSRSLRPTLRMKRNRSMSLQQKLHSVKSSSVTPVENKKPRPQTPVPRDNKDT QAEKRVTSTERKVSKSRTRSASTIRQRLVEMEKELVNHIEPDEAAAETIVKPDVMTKYKS GGRAVDEVIGLVIAACVPGTNTKQLCDLGDQELLQRVLGMFKKKDADGNRIIRGLSYPTN ISVNHVLCNHAPLEESKATTLRGGDVVKIHMGCHIDGYPVSAARTIIVPFDVSSEGNTSD AGATNDGSSSRANSKSGSRPITQGVSNAIEAARVALHGVIHLLQPGNLNADITDFIHRVG NHYGVQALEGVLSNRTKRWVPDGMDCIITRRVVAEAPQQDVADCTIGANQVWTVDVAFTD HNSYKVRPSEDEETVIFRRTEVDLQTDFRVQSVQATLKEMTEKHQCFPFSLKHVENPLKA RMAVAVLRKQGVIDPLPVMRVKGDRYITARFSATVAVSAKRATVLCGLPPLEPLAVPEEV MSATIPDDVALVLAEPLEFTQSEQPVRKKVRLEKGSKTTVGDANAPVEKRSGNEEDEGE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/264 Sequence name : 264 Sequence length : 539 VALUES OF COMPUTED PARAMETERS Coef20 : 4.650 CoefTot : 0.234 ChDiff : 9 ZoneTo : 42 KR : 10 DE : 0 CleavSite : 25 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.694 1.612 0.182 0.579 MesoH : -0.687 0.556 -0.318 0.208 MuHd_075 : 24.498 14.556 5.542 4.887 MuHd_095 : 44.595 20.339 9.761 9.343 MuHd_100 : 39.061 17.040 8.678 7.834 MuHd_105 : 37.429 17.467 8.128 7.430 Hmax_075 : -6.563 3.033 -2.696 -0.187 Hmax_095 : 5.900 1.575 -0.862 1.090 Hmax_100 : 5.900 7.400 -0.862 1.090 Hmax_105 : -0.933 2.683 -2.696 0.303 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0124 0.9876 DFMC : 0.0118 0.9882 This protein is probably imported in mitochondria. f(Ser) = 0.2381 f(Arg) = 0.1667 CMi = 0.78493 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 539 Tbg972.11.4780 MGRGYSNSRSRSLRPTLRMKRNRSMSLQQKLHSVKSSSVTPVENKKPRPQTPVPRDNKDTQAEKRVTSTERKVSKSRTRS 80 ASTIRQRLVEMEKELVNHIEPDEAAAETIVKPDVMTKYKSGGRAVDEVIGLVIAACVPGTNTKQLCDLGDQELLQRVLGM 160 FKKKDADGNRIIRGLSYPTNISVNHVLCNHAPLEESKATTLRGGDVVKIHMGCHIDGYPVSAARTIIVPFDVSSEGNTSD 240 AGATNDGSSSRANSKSGSRPITQGVSNAIEAARVALHGVIHLLQPGNLNADITDFIHRVGNHYGVQALEGVLSNRTKRWV 320 PDGMDCIITRRVVAEAPQQDVADCTIGANQVWTVDVAFTDHNSYKVRPSEDEETVIFRRTEVDLQTDFRVQSVQATLKEM 400 TEKHQCFPFSLKHVENPLKARMAVAVLRKQGVIDPLPVMRVKGDRYITARFSATVAVSAKRATVLCGLPPLEPLAVPEEV 480 MSATIPDDVALVLAEPLEFTQSEQPVRKKVRLEKGSKTTVGDANAPVEKRSGNEEDEGE 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................................P.. 320 ................................................................................ 400 ................................................................................ 480 ........................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.4780 3 ----MGR|GY 0.112 . Tbg972.11.4780 9 RGYSNSR|SR 0.089 . Tbg972.11.4780 11 YSNSRSR|SL 0.206 . Tbg972.11.4780 14 SRSRSLR|PT 0.383 . Tbg972.11.4780 18 SLRPTLR|MK 0.083 . Tbg972.11.4780 20 RPTLRMK|RN 0.061 . Tbg972.11.4780 21 PTLRMKR|NR 0.412 . Tbg972.11.4780 23 LRMKRNR|SM 0.276 . Tbg972.11.4780 30 SMSLQQK|LH 0.069 . Tbg972.11.4780 35 QKLHSVK|SS 0.080 . Tbg972.11.4780 45 VTPVENK|KP 0.060 . Tbg972.11.4780 46 TPVENKK|PR 0.080 . Tbg972.11.4780 48 VENKKPR|PQ 0.135 . Tbg972.11.4780 55 PQTPVPR|DN 0.119 . Tbg972.11.4780 58 PVPRDNK|DT 0.141 . Tbg972.11.4780 64 KDTQAEK|RV 0.066 . Tbg972.11.4780 65 DTQAEKR|VT 0.223 . Tbg972.11.4780 71 RVTSTER|KV 0.145 . Tbg972.11.4780 72 VTSTERK|VS 0.074 . Tbg972.11.4780 75 TERKVSK|SR 0.100 . Tbg972.11.4780 77 RKVSKSR|TR 0.096 . Tbg972.11.4780 79 VSKSRTR|SA 0.229 . Tbg972.11.4780 85 RSASTIR|QR 0.081 . Tbg972.11.4780 87 ASTIRQR|LV 0.113 . Tbg972.11.4780 93 RLVEMEK|EL 0.057 . Tbg972.11.4780 111 AAETIVK|PD 0.053 . Tbg972.11.4780 117 KPDVMTK|YK 0.081 . Tbg972.11.4780 119 DVMTKYK|SG 0.105 . Tbg972.11.4780 123 KYKSGGR|AV 0.126 . Tbg972.11.4780 143 VPGTNTK|QL 0.078 . Tbg972.11.4780 156 DQELLQR|VL 0.073 . Tbg972.11.4780 162 RVLGMFK|KK 0.058 . Tbg972.11.4780 163 VLGMFKK|KD 0.106 . Tbg972.11.4780 164 LGMFKKK|DA 0.249 . Tbg972.11.4780 170 KDADGNR|II 0.084 . Tbg972.11.4780 173 DGNRIIR|GL 0.234 . Tbg972.11.4780 197 APLEESK|AT 0.065 . Tbg972.11.4780 202 SKATTLR|GG 0.113 . Tbg972.11.4780 208 RGGDVVK|IH 0.062 . Tbg972.11.4780 224 YPVSAAR|TI 0.090 . Tbg972.11.4780 251 NDGSSSR|AN 0.125 . Tbg972.11.4780 255 SSRANSK|SG 0.095 . Tbg972.11.4780 259 NSKSGSR|PI 0.096 . Tbg972.11.4780 273 NAIEAAR|VA 0.107 . Tbg972.11.4780 298 ITDFIHR|VG 0.080 . Tbg972.11.4780 315 EGVLSNR|TK 0.090 . Tbg972.11.4780 317 VLSNRTK|RW 0.073 . Tbg972.11.4780 318 LSNRTKR|WV 0.850 *ProP* Tbg972.11.4780 330 MDCIITR|RV 0.117 . Tbg972.11.4780 331 DCIITRR|VV 0.145 . Tbg972.11.4780 365 TDHNSYK|VR 0.066 . Tbg972.11.4780 367 HNSYKVR|PS 0.223 . Tbg972.11.4780 378 EETVIFR|RT 0.091 . Tbg972.11.4780 379 ETVIFRR|TE 0.105 . Tbg972.11.4780 389 DLQTDFR|VQ 0.081 . Tbg972.11.4780 398 SVQATLK|EM 0.061 . Tbg972.11.4780 403 LKEMTEK|HQ 0.061 . Tbg972.11.4780 412 CFPFSLK|HV 0.076 . Tbg972.11.4780 419 HVENPLK|AR 0.062 . Tbg972.11.4780 421 ENPLKAR|MA 0.147 . Tbg972.11.4780 428 MAVAVLR|KQ 0.103 . Tbg972.11.4780 429 AVAVLRK|QG 0.067 . Tbg972.11.4780 440 DPLPVMR|VK 0.096 . Tbg972.11.4780 442 LPVMRVK|GD 0.067 . Tbg972.11.4780 445 MRVKGDR|YI 0.137 . Tbg972.11.4780 450 DRYITAR|FS 0.130 . Tbg972.11.4780 460 TVAVSAK|RA 0.076 . Tbg972.11.4780 461 VAVSAKR|AT 0.117 . Tbg972.11.4780 507 QSEQPVR|KK 0.086 . Tbg972.11.4780 508 SEQPVRK|KV 0.128 . Tbg972.11.4780 509 EQPVRKK|VR 0.075 . Tbg972.11.4780 511 PVRKKVR|LE 0.112 . Tbg972.11.4780 514 KKVRLEK|GS 0.146 . Tbg972.11.4780 517 RLEKGSK|TT 0.056 . Tbg972.11.4780 529 ANAPVEK|RS 0.078 . Tbg972.11.4780 530 NAPVEKR|SG 0.238 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.4780 ATGGGAAGAGGGTACAGTAACAGTCGTAGTAGGAGCCTACGACCCACGCTTCGCATGAAG CGAAACCGGTCGATGTCGCTTCAGCAGAAGTTGCACTCTGTTAAATCCTCATCTGTCACG CCCGTGGAAAACAAGAAGCCCAGGCCCCAAACCCCAGTGCCGAGGGACAACAAGGACACA CAGGCGGAGAAGCGAGTAACCAGTACTGAGCGGAAGGTCAGTAAGTCGCGGACTCGCTCT GCCTCAACAATACGACAAAGGTTGGTTGAGATGGAGAAGGAGCTCGTGAATCACATTGAA CCGGATGAAGCCGCGGCCGAAACCATCGTGAAGCCTGACGTTATGACCAAGTACAAGTCA GGTGGACGTGCTGTGGATGAGGTCATCGGGCTTGTCATCGCTGCTTGTGTCCCTGGTACA AATACTAAGCAGCTGTGTGACTTGGGCGACCAGGAATTACTTCAGCGGGTGCTGGGGATG TTCAAGAAGAAAGATGCAGATGGGAACCGTATCATTCGAGGGCTTTCATACCCTACTAAC ATTTCTGTTAACCACGTGCTTTGTAATCATGCGCCACTTGAGGAATCGAAGGCGACAACA CTTCGTGGTGGTGATGTGGTGAAGATCCACATGGGCTGCCATATCGACGGTTATCCCGTT TCCGCGGCTCGCACGATTATTGTGCCGTTTGACGTTAGCAGCGAGGGGAACACGAGTGAT GCCGGCGCAACCAACGACGGTTCCTCTTCCAGAGCCAACAGCAAATCTGGTTCTCGTCCC ATTACCCAGGGGGTGAGCAACGCCATTGAAGCGGCGCGTGTAGCGCTTCACGGGGTGATT CATCTTTTGCAGCCTGGAAATCTGAATGCTGACATCACCGACTTTATCCACCGCGTAGGC AACCACTACGGCGTTCAGGCTCTTGAAGGCGTCTTGTCAAACCGCACCAAGCGTTGGGTT CCGGACGGAATGGATTGTATCATCACGCGCCGTGTGGTCGCTGAGGCGCCGCAGCAGGAC GTTGCTGACTGTACAATCGGTGCCAACCAAGTTTGGACCGTTGACGTGGCCTTCACAGAC CATAACTCATATAAAGTCCGCCCTTCTGAGGACGAGGAAACCGTTATATTCCGTCGCACA GAGGTTGACCTCCAAACTGATTTCCGCGTGCAGTCCGTACAAGCTACTTTGAAGGAAATG ACGGAAAAGCACCAGTGTTTCCCCTTCAGTTTGAAACATGTGGAAAATCCTCTCAAAGCC CGGATGGCAGTAGCTGTTCTTCGAAAACAAGGTGTAATAGACCCACTTCCCGTGATGCGT GTGAAGGGGGATCGGTATATAACCGCAAGATTCTCTGCAACAGTTGCTGTGTCGGCCAAG AGGGCAACTGTATTGTGTGGACTTCCGCCGTTGGAGCCTCTGGCTGTTCCTGAAGAGGTT ATGTCTGCCACAATTCCGGATGATGTTGCGTTAGTCCTCGCCGAACCGCTTGAATTTACT CAAAGTGAGCAGCCAGTACGGAAGAAGGTGAGACTAGAAAAGGGTTCAAAAACAACGGTG GGTGATGCGAACGCACCAGTTGAGAAGCGCAGCGGTAACGAGGAGGATGAAGGGGAGTAA
  • Download Fasta

  • Fasta :-

    MGRGYSNSRSRSLRPTLRMKRNRSMSLQQKLHSVKSSSVTPVENKKPRPQTPVPRDNKDT QAEKRVTSTERKVSKSRTRSASTIRQRLVEMEKELVNHIEPDEAAAETIVKPDVMTKYKS GGRAVDEVIGLVIAACVPGTNTKQLCDLGDQELLQRVLGMFKKKDADGNRIIRGLSYPTN ISVNHVLCNHAPLEESKATTLRGGDVVKIHMGCHIDGYPVSAARTIIVPFDVSSEGNTSD AGATNDGSSSRANSKSGSRPITQGVSNAIEAARVALHGVIHLLQPGNLNADITDFIHRVG NHYGVQALEGVLSNRTKRWVPDGMDCIITRRVVAEAPQQDVADCTIGANQVWTVDVAFTD HNSYKVRPSEDEETVIFRRTEVDLQTDFRVQSVQATLKEMTEKHQCFPFSLKHVENPLKA RMAVAVLRKQGVIDPLPVMRVKGDRYITARFSATVAVSAKRATVLCGLPPLEPLAVPEEV MSATIPDDVALVLAEPLEFTQSEQPVRKKVRLEKGSKTTVGDANAPVEKRSGNEEDEGE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.478051 TPRPQTPVPR0.994unspTbg972.11.478051 TPRPQTPVPR0.994unspTbg972.11.478051 TPRPQTPVPR0.994unspTbg972.11.478068 SKRVTSTERK0.997unspTbg972.11.478074 SERKVSKSRT0.998unspTbg972.11.478076 SKVSKSRTRS0.995unspTbg972.11.478082 STRSASTIRQ0.998unspTbg972.11.4780120 STKYKSGGRA0.993unspTbg972.11.4780249 SNDGSSSRAN0.992unspTbg972.11.4780254 SSRANSKSGS0.996unspTbg972.11.4780369 SKVRPSEDEE0.997unspTbg972.11.4780458 STVAVSAKRA0.993unspTbg972.11.4780531 SVEKRSGNEE0.992unspTbg972.11.478012 SSRSRSLRPT0.993unspTbg972.11.478033 SQKLHSVKSS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India