Tbg972.11.5810 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.5810OTHER0.9997570.0001660.000077
No Results

  • Fasta :-

    >Tbg972.11.5810 MPSWCLIESDPAVFTELIQRFGAQGVAVEEIVQLEQEYLRVHTNVYGLILLFKWKARKEG AATDGVVVPDAPVFFAQQTVNNACATLSIVNILLNHKESIELGEVLGNFLSFTQDMNPYL RGTQVGECDALREAHNSFAPVELFSLDHSVPDAGDAYHFVSFVYKNSAIWELDGLQEGPI LASDASDENYRDKLMEVVRKRIRDHSAEDTTGAGQGISFSLMAVVDDPLVLLERRIYEAT LQEAPTHYLEEQLNQLTKQRAREKLENQRRRHNYVPMIVELLKALAEKGQLKGILDDALA KKSGQGAKQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/531 Sequence name : 531 Sequence length : 309 VALUES OF COMPUTED PARAMETERS Coef20 : 3.978 CoefTot : -0.019 ChDiff : -14 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 1.659 0.078 0.588 MesoH : -0.500 0.435 -0.389 0.251 MuHd_075 : 7.327 7.494 1.634 2.546 MuHd_095 : 10.732 13.292 4.267 3.114 MuHd_100 : 9.537 10.296 2.260 3.269 MuHd_105 : 11.185 8.455 0.933 3.626 Hmax_075 : 16.217 14.500 3.419 5.390 Hmax_095 : 13.400 11.813 1.161 4.700 Hmax_100 : 13.400 15.100 1.193 5.120 Hmax_105 : 17.800 15.000 1.802 6.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9700 0.0300 DFMC : 0.9825 0.0175
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 309 Tbg972.11.5810 MPSWCLIESDPAVFTELIQRFGAQGVAVEEIVQLEQEYLRVHTNVYGLILLFKWKARKEGAATDGVVVPDAPVFFAQQTV 80 NNACATLSIVNILLNHKESIELGEVLGNFLSFTQDMNPYLRGTQVGECDALREAHNSFAPVELFSLDHSVPDAGDAYHFV 160 SFVYKNSAIWELDGLQEGPILASDASDENYRDKLMEVVRKRIRDHSAEDTTGAGQGISFSLMAVVDDPLVLLERRIYEAT 240 LQEAPTHYLEEQLNQLTKQRAREKLENQRRRHNYVPMIVELLKALAEKGQLKGILDDALAKKSGQGAKQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.5810 20 FTELIQR|FG 0.088 . Tbg972.11.5810 40 LEQEYLR|VH 0.071 . Tbg972.11.5810 53 GLILLFK|WK 0.070 . Tbg972.11.5810 55 ILLFKWK|AR 0.064 . Tbg972.11.5810 57 LFKWKAR|KE 0.149 . Tbg972.11.5810 58 FKWKARK|EG 0.074 . Tbg972.11.5810 97 NILLNHK|ES 0.055 . Tbg972.11.5810 121 DMNPYLR|GT 0.111 . Tbg972.11.5810 132 GECDALR|EA 0.096 . Tbg972.11.5810 165 FVSFVYK|NS 0.073 . Tbg972.11.5810 191 ASDENYR|DK 0.083 . Tbg972.11.5810 193 DENYRDK|LM 0.073 . Tbg972.11.5810 199 KLMEVVR|KR 0.077 . Tbg972.11.5810 200 LMEVVRK|RI 0.084 . Tbg972.11.5810 201 MEVVRKR|IR 0.184 . Tbg972.11.5810 203 VVRKRIR|DH 0.123 . Tbg972.11.5810 234 PLVLLER|RI 0.083 . Tbg972.11.5810 235 LVLLERR|IY 0.117 . Tbg972.11.5810 258 QLNQLTK|QR 0.062 . Tbg972.11.5810 260 NQLTKQR|AR 0.120 . Tbg972.11.5810 262 LTKQRAR|EK 0.083 . Tbg972.11.5810 264 KQRAREK|LE 0.065 . Tbg972.11.5810 269 EKLENQR|RR 0.076 . Tbg972.11.5810 270 KLENQRR|RH 0.119 . Tbg972.11.5810 271 LENQRRR|HN 0.151 . Tbg972.11.5810 283 MIVELLK|AL 0.064 . Tbg972.11.5810 288 LKALAEK|GQ 0.068 . Tbg972.11.5810 292 AEKGQLK|GI 0.066 . Tbg972.11.5810 301 LDDALAK|KS 0.076 . Tbg972.11.5810 302 DDALAKK|SG 0.121 . Tbg972.11.5810 308 KSGQGAK|Q- 0.075 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.5810 ATGCCCAGTTGGTGTCTTATTGAAAGCGATCCAGCGGTTTTCACGGAGCTTATCCAACGG TTCGGCGCCCAAGGCGTGGCCGTTGAGGAAATCGTACAGCTTGAGCAGGAGTATCTACGC GTCCACACTAATGTCTACGGTCTGATTCTTCTTTTCAAATGGAAAGCAAGGAAGGAAGGT GCTGCGACTGATGGTGTAGTCGTTCCAGATGCCCCTGTATTTTTCGCCCAGCAGACTGTT AACAACGCCTGCGCCACGCTTTCCATCGTGAATATTCTCCTGAACCACAAGGAGAGTATT GAACTTGGGGAGGTGTTAGGCAATTTTCTCTCCTTCACCCAGGACATGAATCCGTATCTT CGAGGCACGCAAGTGGGCGAGTGTGATGCCCTTCGTGAGGCTCACAACTCTTTTGCGCCG GTGGAACTCTTCTCTTTAGACCATAGTGTGCCTGATGCAGGCGATGCATACCACTTTGTT TCGTTTGTGTACAAGAACAGTGCCATATGGGAACTAGATGGGCTTCAGGAGGGACCTATT CTCGCCTCCGATGCTAGTGATGAGAACTACAGGGACAAACTGATGGAAGTTGTGCGGAAA CGCATCAGGGATCACAGCGCTGAGGACACGACAGGAGCTGGGCAGGGGATTTCCTTCTCT CTCATGGCTGTGGTTGATGATCCCCTTGTATTGTTGGAAAGGAGAATATACGAAGCGACA CTACAGGAGGCCCCCACGCATTATTTGGAGGAGCAGTTGAATCAACTGACGAAACAGCGC GCGCGTGAAAAACTCGAAAACCAGCGCAGGCGTCATAATTACGTTCCTATGATCGTGGAG TTGTTGAAGGCACTCGCTGAGAAGGGGCAGTTGAAGGGGATCTTGGACGATGCGCTCGCA AAAAAAAGTGGTCAAGGGGCTAAGCAGTAG
  • Download Fasta

  • Fasta :-

    MPSWCLIESDPAVFTELIQRFGAQGVAVEEIVQLEQEYLRVHTNVYGLILLFKWKARKEG AATDGVVVPDAPVFFAQQTVNNACATLSIVNILLNHKESIELGEVLGNFLSFTQDMNPYL RGTQVGECDALREAHNSFAPVELFSLDHSVPDAGDAYHFVSFVYKNSAIWELDGLQEGPI LASDASDENYRDKLMEVVRKRIRDHSAEDTTGAGQGISFSLMAVVDDPLVLLERRIYEAT LQEAPTHYLEEQLNQLTKQRAREKLENQRRRHNYVPMIVELLKALAEKGQLKGILDDALA KKSGQGAKQ

  • title: catalytic site
  • coordinates: Q78,C84,H158,D173
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.5810149 SSLDHSVPDA0.994unspTbg972.11.5810206 SIRDHSAEDT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India