Tbg972.11.5950 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.11.5950OTHER0.9972340.0001200.002646
No Results

  • Fasta :-

    >Tbg972.11.5950 MDIVNNNGSFVTRTTVSRPIPFERYRKPCIATYPRSAVFLNKRRANELHCSGAPGNENGS DDNASSLAFGEDNGKNEAADDDDPLNIDPETMLCSDEQLKQVLALRWRDVGPNGCGLQNM GNTCFINCVLQAIAYTPALSQYFSTTFRSPHTDRVLNAPFDYAYALGETIRKIHTPSRNA YKPTVIISNIKVLSPHFRLGVQGDAHEFAVHLLHACHRSILFRQVGSRKLPQHIEQTSTL QRIVGGYLRSTVTWSRREEIHYLLKEGNLQEASNLKMNANSRKSDSDDGHKELISNTYDP FVTLSPEICGQTLEHCLSKLCAKERLEGRVYITPRGVTVNATKQFMLHKLPNVLIIHLKR FNEFGAKVGKFVRYPKILNMGPFCTADGTLKKLRNHKRRGYKPSNGPASCDSSIYNSEAS NRSVECLYELNAICVHQGSSLSHGHYFSVVRARNESWIECNDGHISHCSEDHALSQSAYM LFYSRVAESSATPDIKCSRDNRTTHRGMELSSGRVKPFTGSTPRKIVGECPTSDVGRELT DQEALRLIGKKREVPQQQLVQTNGEKRVQHVGLPARLKGLNTKSSSSTAVRDNSSNNSLW SEQETCSSSYASSAAFDREENSVCSSRKNSAPDRYCGIVKALKVNGSRDVGKRGTSPTDP LGGHRSSVVGEEVLRAMEKHKLEAPLTVMRQPHAPKFRQQVRDPLWEQEMDRGRTKRSRL KRDESTDEENKFQKADIGFDSRGRRLLNQRNERANGRSFAHGKFS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/9 Sequence name : 9 Sequence length : 765 VALUES OF COMPUTED PARAMETERS Coef20 : 4.316 CoefTot : -1.117 ChDiff : 26 ZoneTo : 46 KR : 9 DE : 2 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.147 1.335 0.232 0.494 MesoH : -0.558 0.081 -0.352 0.135 MuHd_075 : 39.414 23.576 11.394 9.203 MuHd_095 : 30.207 17.798 8.721 6.449 MuHd_100 : 23.885 11.369 7.195 4.364 MuHd_105 : 22.776 11.529 6.623 4.053 Hmax_075 : 12.300 12.100 3.549 5.130 Hmax_095 : 6.563 12.700 1.722 2.205 Hmax_100 : 10.300 7.000 1.882 3.700 Hmax_105 : -4.433 5.833 0.413 1.097 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4579 0.5421 DFMC : 0.4904 0.5096 This protein is probably imported in mitochondria. f(Ser) = 0.0652 f(Arg) = 0.1522 CMi = 0.23041 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 765 Tbg972.11.5950 MDIVNNNGSFVTRTTVSRPIPFERYRKPCIATYPRSAVFLNKRRANELHCSGAPGNENGSDDNASSLAFGEDNGKNEAAD 80 DDDPLNIDPETMLCSDEQLKQVLALRWRDVGPNGCGLQNMGNTCFINCVLQAIAYTPALSQYFSTTFRSPHTDRVLNAPF 160 DYAYALGETIRKIHTPSRNAYKPTVIISNIKVLSPHFRLGVQGDAHEFAVHLLHACHRSILFRQVGSRKLPQHIEQTSTL 240 QRIVGGYLRSTVTWSRREEIHYLLKEGNLQEASNLKMNANSRKSDSDDGHKELISNTYDPFVTLSPEICGQTLEHCLSKL 320 CAKERLEGRVYITPRGVTVNATKQFMLHKLPNVLIIHLKRFNEFGAKVGKFVRYPKILNMGPFCTADGTLKKLRNHKRRG 400 YKPSNGPASCDSSIYNSEASNRSVECLYELNAICVHQGSSLSHGHYFSVVRARNESWIECNDGHISHCSEDHALSQSAYM 480 LFYSRVAESSATPDIKCSRDNRTTHRGMELSSGRVKPFTGSTPRKIVGECPTSDVGRELTDQEALRLIGKKREVPQQQLV 560 QTNGEKRVQHVGLPARLKGLNTKSSSSTAVRDNSSNNSLWSEQETCSSSYASSAAFDREENSVCSSRKNSAPDRYCGIVK 640 ALKVNGSRDVGKRGTSPTDPLGGHRSSVVGEEVLRAMEKHKLEAPLTVMRQPHAPKFRQQVRDPLWEQEMDRGRTKRSRL 720 KRDESTDEENKFQKADIGFDSRGRRLLNQRNERANGRSFAHGKFS 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................P... 720 .P........................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ Tbg972.11.5950 13 NGSFVTR|TT 0.091 . Tbg972.11.5950 18 TRTTVSR|PI 0.091 . Tbg972.11.5950 24 RPIPFER|YR 0.119 . Tbg972.11.5950 26 IPFERYR|KP 0.084 . Tbg972.11.5950 27 PFERYRK|PC 0.154 . Tbg972.11.5950 35 CIATYPR|SA 0.120 . Tbg972.11.5950 42 SAVFLNK|RR 0.066 . Tbg972.11.5950 43 AVFLNKR|RA 0.134 . Tbg972.11.5950 44 VFLNKRR|AN 0.107 . Tbg972.11.5950 75 FGEDNGK|NE 0.054 . Tbg972.11.5950 100 CSDEQLK|QV 0.066 . Tbg972.11.5950 106 KQVLALR|WR 0.087 . Tbg972.11.5950 108 VLALRWR|DV 0.273 . Tbg972.11.5950 148 YFSTTFR|SP 0.140 . Tbg972.11.5950 154 RSPHTDR|VL 0.091 . Tbg972.11.5950 171 ALGETIR|KI 0.086 . Tbg972.11.5950 172 LGETIRK|IH 0.074 . Tbg972.11.5950 178 KIHTPSR|NA 0.106 . Tbg972.11.5950 182 PSRNAYK|PT 0.071 . Tbg972.11.5950 191 VIISNIK|VL 0.063 . Tbg972.11.5950 198 VLSPHFR|LG 0.133 . Tbg972.11.5950 218 LLHACHR|SI 0.134 . Tbg972.11.5950 223 HRSILFR|QV 0.195 . Tbg972.11.5950 228 FRQVGSR|KL 0.112 . Tbg972.11.5950 229 RQVGSRK|LP 0.087 . Tbg972.11.5950 242 QTSTLQR|IV 0.225 . Tbg972.11.5950 249 IVGGYLR|ST 0.092 . Tbg972.11.5950 256 STVTWSR|RE 0.071 . Tbg972.11.5950 257 TVTWSRR|EE 0.123 . Tbg972.11.5950 265 EIHYLLK|EG 0.059 . Tbg972.11.5950 276 QEASNLK|MN 0.063 . Tbg972.11.5950 282 KMNANSR|KS 0.088 . Tbg972.11.5950 283 MNANSRK|SD 0.224 . Tbg972.11.5950 291 DSDDGHK|EL 0.057 . Tbg972.11.5950 319 LEHCLSK|LC 0.063 . Tbg972.11.5950 323 LSKLCAK|ER 0.062 . Tbg972.11.5950 325 KLCAKER|LE 0.109 . Tbg972.11.5950 329 KERLEGR|VY 0.081 . Tbg972.11.5950 335 RVYITPR|GV 0.135 . Tbg972.11.5950 343 VTVNATK|QF 0.056 . Tbg972.11.5950 349 KQFMLHK|LP 0.063 . Tbg972.11.5950 359 VLIIHLK|RF 0.061 . Tbg972.11.5950 360 LIIHLKR|FN 0.230 . Tbg972.11.5950 367 FNEFGAK|VG 0.054 . Tbg972.11.5950 370 FGAKVGK|FV 0.082 . Tbg972.11.5950 373 KVGKFVR|YP 0.087 . Tbg972.11.5950 376 KFVRYPK|IL 0.141 . Tbg972.11.5950 391 TADGTLK|KL 0.059 . Tbg972.11.5950 392 ADGTLKK|LR 0.092 . Tbg972.11.5950 394 GTLKKLR|NH 0.074 . Tbg972.11.5950 397 KKLRNHK|RR 0.111 . Tbg972.11.5950 398 KLRNHKR|RG 0.166 . Tbg972.11.5950 399 LRNHKRR|GY 0.361 . Tbg972.11.5950 402 HKRRGYK|PS 0.117 . Tbg972.11.5950 422 NSEASNR|SV 0.221 . Tbg972.11.5950 451 HYFSVVR|AR 0.075 . Tbg972.11.5950 453 FSVVRAR|NE 0.135 . Tbg972.11.5950 485 YMLFYSR|VA 0.074 . Tbg972.11.5950 496 SATPDIK|CS 0.071 . Tbg972.11.5950 499 PDIKCSR|DN 0.107 . Tbg972.11.5950 502 KCSRDNR|TT 0.406 . Tbg972.11.5950 506 DNRTTHR|GM 0.095 . Tbg972.11.5950 514 MELSSGR|VK 0.071 . Tbg972.11.5950 516 LSSGRVK|PF 0.073 . Tbg972.11.5950 524 FTGSTPR|KI 0.092 . Tbg972.11.5950 525 TGSTPRK|IV 0.224 . Tbg972.11.5950 537 PTSDVGR|EL 0.170 . Tbg972.11.5950 546 TDQEALR|LI 0.130 . Tbg972.11.5950 550 ALRLIGK|KR 0.062 . Tbg972.11.5950 551 LRLIGKK|RE 0.087 . Tbg972.11.5950 552 RLIGKKR|EV 0.447 . Tbg972.11.5950 566 VQTNGEK|RV 0.066 . Tbg972.11.5950 567 QTNGEKR|VQ 0.209 . Tbg972.11.5950 576 HVGLPAR|LK 0.092 . Tbg972.11.5950 578 GLPARLK|GL 0.068 . Tbg972.11.5950 583 LKGLNTK|SS 0.076 . Tbg972.11.5950 591 SSSTAVR|DN 0.144 . Tbg972.11.5950 618 SSAAFDR|EE 0.096 . Tbg972.11.5950 627 NSVCSSR|KN 0.089 . Tbg972.11.5950 628 SVCSSRK|NS 0.084 . Tbg972.11.5950 634 KNSAPDR|YC 0.153 . Tbg972.11.5950 640 RYCGIVK|AL 0.062 . Tbg972.11.5950 643 GIVKALK|VN 0.059 . Tbg972.11.5950 648 LKVNGSR|DV 0.187 . Tbg972.11.5950 652 GSRDVGK|RG 0.066 . Tbg972.11.5950 653 SRDVGKR|GT 0.297 . Tbg972.11.5950 665 DPLGGHR|SS 0.117 . Tbg972.11.5950 675 VGEEVLR|AM 0.077 . Tbg972.11.5950 679 VLRAMEK|HK 0.067 . Tbg972.11.5950 681 RAMEKHK|LE 0.066 . Tbg972.11.5950 690 APLTVMR|QP 0.080 . Tbg972.11.5950 696 RQPHAPK|FR 0.075 . Tbg972.11.5950 698 PHAPKFR|QQ 0.093 . Tbg972.11.5950 702 KFRQQVR|DP 0.119 . Tbg972.11.5950 712 WEQEMDR|GR 0.078 . Tbg972.11.5950 714 QEMDRGR|TK 0.077 . Tbg972.11.5950 716 MDRGRTK|RS 0.065 . Tbg972.11.5950 717 DRGRTKR|SR 0.729 *ProP* Tbg972.11.5950 719 GRTKRSR|LK 0.099 . Tbg972.11.5950 721 TKRSRLK|RD 0.062 . Tbg972.11.5950 722 KRSRLKR|DE 0.838 *ProP* Tbg972.11.5950 731 STDEENK|FQ 0.057 . Tbg972.11.5950 734 EENKFQK|AD 0.067 . Tbg972.11.5950 742 DIGFDSR|GR 0.065 . Tbg972.11.5950 744 GFDSRGR|RL 0.070 . Tbg972.11.5950 745 FDSRGRR|LL 0.407 . Tbg972.11.5950 750 RRLLNQR|NE 0.089 . Tbg972.11.5950 753 LNQRNER|AN 0.366 . Tbg972.11.5950 757 NERANGR|SF 0.147 . Tbg972.11.5950 763 RSFAHGK|FS 0.085 . ____________________________^_________________

  • Fasta :-

    >Tbg972.11.5950 ATGGATATCGTTAATAACAATGGTTCTTTTGTGACACGCACTACTGTTTCCCGTCCCATT CCGTTTGAGCGCTATCGTAAACCGTGCATCGCCACTTACCCGAGAAGTGCCGTTTTTCTC AACAAGCGCCGCGCGAATGAGCTACATTGCAGTGGCGCACCCGGAAATGAAAATGGAAGT GATGACAATGCGTCTTCCCTCGCCTTTGGTGAAGATAATGGGAAGAATGAGGCGGCAGAC GATGACGACCCGCTGAACATCGACCCAGAAACAATGCTTTGTTCCGATGAGCAACTAAAA CAAGTGCTTGCTCTCCGCTGGCGCGACGTTGGTCCTAACGGATGCGGTTTGCAGAACATG GGAAATACATGCTTTATCAATTGCGTGCTTCAAGCGATAGCGTATACACCTGCTCTTTCG CAATACTTTTCGACTACTTTCCGTTCTCCACACACAGACCGGGTGTTGAATGCGCCATTT GACTACGCTTATGCTTTGGGAGAGACAATTCGTAAAATACACACTCCTTCGAGAAACGCA TATAAACCAACCGTAATCATCAGCAACATTAAGGTGCTTTCACCACACTTTCGCCTTGGA GTGCAAGGTGACGCGCATGAATTTGCCGTGCACCTGCTGCATGCGTGCCACCGTTCAATT TTGTTTAGGCAAGTGGGTTCTCGTAAGTTGCCGCAACACATCGAACAAACTTCGACATTA CAGCGGATCGTTGGTGGTTACCTTCGTTCCACTGTCACTTGGAGTAGGCGGGAGGAGATT CATTACTTGTTAAAGGAGGGGAACCTTCAGGAAGCAAGTAACTTAAAGATGAACGCGAAT TCGCGCAAAAGTGATAGTGATGATGGACACAAGGAACTCATCTCCAACACATATGATCCA TTTGTGACGCTTAGCCCAGAGATCTGTGGTCAAACGCTCGAACACTGTTTGTCCAAACTC TGCGCGAAGGAAAGGTTGGAGGGACGGGTGTATATAACGCCTCGCGGCGTTACCGTGAAC GCTACTAAACAATTTATGTTGCATAAGTTACCGAATGTTTTAATTATCCATTTGAAACGT TTCAATGAGTTCGGGGCGAAGGTTGGGAAGTTTGTACGATACCCGAAGATACTGAACATG GGGCCCTTTTGCACGGCCGATGGAACGTTGAAAAAGCTACGTAACCACAAGAGGAGGGGT TACAAGCCCTCGAATGGTCCCGCTAGTTGTGACAGCAGCATTTATAATAGCGAAGCGAGC AATAGGTCAGTTGAGTGCCTATACGAATTGAACGCCATTTGTGTCCACCAGGGTTCCTCG CTCTCCCATGGGCACTACTTCAGTGTTGTTCGCGCACGCAATGAATCGTGGATTGAGTGC AATGATGGCCACATTTCACATTGCAGCGAGGACCATGCCCTATCGCAATCAGCGTATATG CTTTTCTACTCCCGAGTAGCGGAAAGCTCTGCCACGCCCGATATCAAGTGCAGTCGAGAC AATCGTACAACACACAGGGGCATGGAACTATCATCGGGTCGTGTTAAACCCTTTACGGGA AGTACACCACGTAAAATAGTGGGTGAGTGCCCTACTAGCGATGTAGGTCGTGAGTTAACC GACCAAGAGGCGCTACGACTTATTGGAAAGAAGAGAGAAGTACCCCAGCAGCAGTTAGTA CAGACGAACGGTGAGAAGAGAGTTCAACATGTTGGTCTTCCAGCTAGGTTGAAAGGACTC AACACCAAGTCGTCATCATCTACTGCTGTACGGGACAACAGCTCCAACAACTCACTGTGG AGTGAACAGGAGACGTGTTCATCTTCCTACGCTTCCTCGGCGGCTTTCGACAGAGAAGAG AATTCAGTTTGTTCTTCTCGGAAGAATAGTGCACCCGACAGATATTGCGGAATAGTGAAA GCCCTAAAGGTAAACGGGTCGAGGGATGTTGGAAAGAGAGGGACTTCTCCAACTGACCCT TTGGGGGGCCACAGAAGCAGCGTTGTGGGGGAGGAGGTGTTGAGGGCTATGGAAAAGCAT AAGCTGGAGGCTCCATTGACTGTTATGCGTCAACCCCATGCGCCAAAGTTTCGACAGCAA GTGCGAGATCCTTTGTGGGAGCAGGAGATGGATCGTGGCCGTACAAAGCGATCAAGGTTG AAGCGGGATGAAAGCACGGATGAGGAAAACAAATTTCAGAAGGCAGACATTGGGTTTGAC AGCCGTGGAAGGCGTCTCCTGAACCAACGAAATGAACGAGCTAACGGCCGGAGTTTTGCC CACGGAAAATTCTCGTAA
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  • Fasta :-

    MDIVNNNGSFVTRTTVSRPIPFERYRKPCIATYPRSAVFLNKRRANELHCSGAPGNENGS DDNASSLAFGEDNGKNEAADDDDPLNIDPETMLCSDEQLKQVLALRWRDVGPNGCGLQNM GNTCFINCVLQAIAYTPALSQYFSTTFRSPHTDRVLNAPFDYAYALGETIRKIHTPSRNA YKPTVIISNIKVLSPHFRLGVQGDAHEFAVHLLHACHRSILFRQVGSRKLPQHIEQTSTL QRIVGGYLRSTVTWSRREEIHYLLKEGNLQEASNLKMNANSRKSDSDDGHKELISNTYDP FVTLSPEICGQTLEHCLSKLCAKERLEGRVYITPRGVTVNATKQFMLHKLPNVLIIHLKR FNEFGAKVGKFVRYPKILNMGPFCTADGTLKKLRNHKRRGYKPSNGPASCDSSIYNSEAS NRSVECLYELNAICVHQGSSLSHGHYFSVVRARNESWIECNDGHISHCSEDHALSQSAYM LFYSRVAESSATPDIKCSRDNRTTHRGMELSSGRVKPFTGSTPRKIVGECPTSDVGRELT DQEALRLIGKKREVPQQQLVQTNGEKRVQHVGLPARLKGLNTKSSSSTAVRDNSSNNSLW SEQETCSSSYASSAAFDREENSVCSSRKNSAPDRYCGIVKALKVNGSRDVGKRGTSPTDP LGGHRSSVVGEEVLRAMEKHKLEAPLTVMRQPHAPKFRQQVRDPLWEQEMDRGRTKRSRL KRDESTDEENKFQKADIGFDSRGRRLLNQRNERANGRSFAHGKFS

  • title: Active Site
  • coordinates: N119,C124,H445,D462
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.11.5950630 SSRKNSAPDR0.995unspTbg972.11.5950630 SSRKNSAPDR0.995unspTbg972.11.5950630 SSRKNSAPDR0.995unspTbg972.11.5950656 SKRGTSPTDP0.998unspTbg972.11.5950725 SKRDESTDEE0.993unspTbg972.11.5950284 SNSRKSDSDD0.998unspTbg972.11.5950286 SRKSDSDDGH0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India