Tbg972.3.1300 | CAAX amino terminal protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

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_IDPredictionOTHERSPmTPCS_Position
Tbg972.3.1300OTHER0.9631710.0354160.001413
No Results

  • Fasta :-

    >Tbg972.3.1300 MSDVGICALLCGGFVGTIFLWRKERTFALLCMKDIEKAWECGPEHLDRNDPSTFRRRLIS FVGSTAVSWLLLEYLLFKEARDKTSVGPSAVIHFLFCQEGNVLRALHVTVSTALATLALF SGTLLEKGIALFQQDADEIFLRDNVICPTGEEIFFRALLLQILLQRRSVTSSIVISSVLF AVSHTHHIFPSVAWEYRYIMGNNEPQPRKKLVCWRRAAKKLPGLYLCTFACGLLTGYCYV VVGKRNLPSTIVTHALCNFIGPPTFDFLQEQTWLKRLVYGGAYCGGIAGWYIITSTVARR ST
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/778 Sequence name : 778 Sequence length : 302 VALUES OF COMPUTED PARAMETERS Coef20 : 3.989 CoefTot : -0.597 ChDiff : 9 ZoneTo : 23 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 2.288 0.620 0.810 MesoH : 0.270 0.851 -0.077 0.350 MuHd_075 : 23.253 19.888 6.630 6.295 MuHd_095 : 13.614 11.230 4.409 3.227 MuHd_100 : 17.132 12.432 4.436 3.725 MuHd_105 : 15.649 13.747 4.830 2.600 Hmax_075 : 21.817 25.550 6.033 7.560 Hmax_095 : 17.150 18.637 7.325 6.510 Hmax_100 : 17.800 22.500 4.675 6.150 Hmax_105 : 16.900 21.350 5.136 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9608 0.0392 DFMC : 0.9699 0.0301
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 302 Tbg972.3.1300 MSDVGICALLCGGFVGTIFLWRKERTFALLCMKDIEKAWECGPEHLDRNDPSTFRRRLISFVGSTAVSWLLLEYLLFKEA 80 RDKTSVGPSAVIHFLFCQEGNVLRALHVTVSTALATLALFSGTLLEKGIALFQQDADEIFLRDNVICPTGEEIFFRALLL 160 QILLQRRSVTSSIVISSVLFAVSHTHHIFPSVAWEYRYIMGNNEPQPRKKLVCWRRAAKKLPGLYLCTFACGLLTGYCYV 240 VVGKRNLPSTIVTHALCNFIGPPTFDFLQEQTWLKRLVYGGAYCGGIAGWYIITSTVARRST 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.3.1300 22 GTIFLWR|KE 0.069 . Tbg972.3.1300 23 TIFLWRK|ER 0.076 . Tbg972.3.1300 25 FLWRKER|TF 0.143 . Tbg972.3.1300 33 FALLCMK|DI 0.074 . Tbg972.3.1300 37 CMKDIEK|AW 0.068 . Tbg972.3.1300 48 GPEHLDR|ND 0.081 . Tbg972.3.1300 55 NDPSTFR|RR 0.066 . Tbg972.3.1300 56 DPSTFRR|RL 0.177 . Tbg972.3.1300 57 PSTFRRR|LI 0.187 . Tbg972.3.1300 78 LEYLLFK|EA 0.066 . Tbg972.3.1300 81 LLFKEAR|DK 0.166 . Tbg972.3.1300 83 FKEARDK|TS 0.054 . Tbg972.3.1300 104 QEGNVLR|AL 0.102 . Tbg972.3.1300 127 SGTLLEK|GI 0.061 . Tbg972.3.1300 142 ADEIFLR|DN 0.103 . Tbg972.3.1300 156 GEEIFFR|AL 0.094 . Tbg972.3.1300 166 LQILLQR|RS 0.066 . Tbg972.3.1300 167 QILLQRR|SV 0.290 . Tbg972.3.1300 197 SVAWEYR|YI 0.123 . Tbg972.3.1300 208 NNEPQPR|KK 0.076 . Tbg972.3.1300 209 NEPQPRK|KL 0.069 . Tbg972.3.1300 210 EPQPRKK|LV 0.159 . Tbg972.3.1300 215 KKLVCWR|RA 0.129 . Tbg972.3.1300 216 KLVCWRR|AA 0.191 . Tbg972.3.1300 219 CWRRAAK|KL 0.123 . Tbg972.3.1300 220 WRRAAKK|LP 0.143 . Tbg972.3.1300 244 CYVVVGK|RN 0.059 . Tbg972.3.1300 245 YVVVGKR|NL 0.118 . Tbg972.3.1300 275 QEQTWLK|RL 0.059 . Tbg972.3.1300 276 EQTWLKR|LV 0.193 . Tbg972.3.1300 299 ITSTVAR|RS 0.112 . Tbg972.3.1300 300 TSTVARR|ST 0.298 . ____________________________^_________________

  • Fasta :-

    >Tbg972.3.1300 ATGAGTGATGTCGGCATCTGCGCTCTTCTTTGTGGTGGGTTTGTTGGGACCATCTTTTTA TGGCGGAAGGAGCGGACTTTTGCCCTTCTCTGCATGAAAGATATCGAAAAGGCATGGGAG TGCGGGCCGGAACATTTGGACCGGAATGATCCCTCAACATTTCGAAGGCGACTTATTTCT TTTGTTGGATCCACTGCTGTTAGTTGGCTGCTGTTGGAGTATCTTCTCTTCAAGGAAGCA CGCGATAAAACATCTGTTGGTCCCAGTGCTGTAATCCACTTTTTGTTTTGTCAAGAGGGC AATGTGTTGCGAGCCCTTCACGTTACTGTATCCACCGCCTTGGCCACACTCGCGCTCTTC AGTGGAACCCTGTTAGAGAAGGGAATCGCTCTATTTCAACAGGACGCGGATGAAATTTTT CTTCGAGACAATGTGATTTGTCCAACAGGTGAAGAAATTTTTTTCCGCGCACTGCTTCTT CAAATATTACTTCAGCGACGGTCCGTGACGTCATCTATAGTCATATCGTCAGTACTGTTT GCTGTATCACACACGCACCATATCTTTCCCTCTGTGGCTTGGGAATATCGTTATATAATG GGAAATAATGAGCCTCAACCCAGGAAAAAACTAGTGTGCTGGAGACGTGCAGCAAAAAAA CTTCCTGGTTTGTACCTCTGCACATTTGCCTGTGGTTTGCTCACCGGGTATTGCTATGTT GTTGTTGGAAAGAGGAACTTACCTTCCACTATAGTCACTCATGCACTCTGCAACTTTATT GGACCTCCAACTTTTGACTTTCTCCAAGAGCAAACATGGCTTAAACGTTTGGTGTACGGC GGTGCCTATTGCGGGGGTATCGCCGGTTGGTACATCATTACTTCAACAGTTGCTAGAAGG TCAACATAA
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  • Fasta :-

    MSDVGICALLCGGFVGTIFLWRKERTFALLCMKDIEKAWECGPEHLDRNDPSTFRRRLIS FVGSTAVSWLLLEYLLFKEARDKTSVGPSAVIHFLFCQEGNVLRALHVTVSTALATLALF SGTLLEKGIALFQQDADEIFLRDNVICPTGEEIFFRALLLQILLQRRSVTSSIVISSVLF AVSHTHHIFPSVAWEYRYIMGNNEPQPRKKLVCWRRAAKKLPGLYLCTFACGLLTGYCYV VVGKRNLPSTIVTHALCNFIGPPTFDFLQEQTWLKRLVYGGAYCGGIAGWYIITSTVARR ST

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India