Tbg972.3.6320 | Metallopeptidase family M24/FACT complex subunit (SPT16/CDC68)/Histone chaperone Rttp106-like, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005634      

  • Curated_GO_Components:  nucleus      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.3.6320OTHER0.9974410.0006790.001880
No Results

  • Fasta :-

    >Tbg972.3.6320 MSRVTLSASRMEKIVNAWRKVPDAAEGCSVMCCVFGALTPETLENQRGQAMLQYLFTSLN TVCNAALFFSFDKLLVVHSNLNVELPPSSESFTYASATLDEKFGEILAAFVADAKVGVCQ KELNIQEGDFAPKLISVVREIVPAERTVEVGPLLGEFLFVKDEAALSCVEKAAGLCNAIF RRSARGMIESEMQKSNPKTLSALREQLTKTLEAPNTVMGLETLDVSQFSIASGLTPCIMH RGTYNPQISVTEVSTQPLRSDVIVVRYGLKNCGYTAFIARTLISERNAPSNVKDVYKFVY NVTEKLLEHLRVGTRLSAVHEEVMKYATTTNEALAKHLPKSLGFSTGLLVLEARGTISQK GTATVEDGMAFVTRVTLEGVPDGEGGTFDVELSDTVTVKGGAAQLNTKTSRKLEEVLYDD SAEEETAFETSARDLNKITRQGQSSVPLLSRESAREEKLKTLLRELHAELAAAGGKKAKT AVSEEFRTYEIARLSYGDVIPYANETSFPDVARGGGIYVDAEKEVAFFPVCGGVAAFHVS TISRVDVKFEGDQVAGIFSFHSLQEGNIAYRLNRTKIFVKELTYRARRDIFTDVKIAIQG IQQRIKNRDTERRRVSLNAGGAQLQTVPDAIRLPQVKIRPPATTGRYNKECIGNLEIHRN GLRFSYIGGAPIDMHFENIKHVIFQPAVNAVRVIYHITLKKGVEIARKSVDEVQFVAEVM ESSETVMAARKGYEEEIAAEERELMRISDTNKQFLKFAQAVERVSMIKTQIPASNFSFEG VHAKGLTTFKANREVLWAIMDRPPFTQRVEDIEVVSLERVIPGGSTFDVNLIFKDYNKPP ASITTIPRSSLESLKDWCLAARLYYMETSVNPNWKVVLKTIIEDEDWDPWRPGAGWAVLN DDFEGDEEASEDSDSDDSTYVEEEDETDETGSSFLDDEESEPESMTKRTVKVC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/293 Sequence name : 293 Sequence length : 953 VALUES OF COMPUTED PARAMETERS Coef20 : 4.982 CoefTot : 0.869 ChDiff : -26 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.547 0.358 0.641 MesoH : -0.045 0.570 -0.237 0.282 MuHd_075 : 18.471 13.041 5.756 3.153 MuHd_095 : 10.692 8.958 2.986 3.058 MuHd_100 : 27.995 16.645 6.110 6.746 MuHd_105 : 40.689 21.838 8.600 9.223 Hmax_075 : 1.283 10.733 -0.445 2.625 Hmax_095 : 1.900 8.600 -1.194 2.580 Hmax_100 : 16.100 14.900 1.822 5.490 Hmax_105 : 16.800 14.700 1.713 5.364 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5848 0.4152 DFMC : 0.4306 0.5694 This protein is probably imported in mitochondria. f(Ser) = 0.2727 f(Arg) = 0.1818 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 953 Tbg972.3.6320 MSRVTLSASRMEKIVNAWRKVPDAAEGCSVMCCVFGALTPETLENQRGQAMLQYLFTSLNTVCNAALFFSFDKLLVVHSN 80 LNVELPPSSESFTYASATLDEKFGEILAAFVADAKVGVCQKELNIQEGDFAPKLISVVREIVPAERTVEVGPLLGEFLFV 160 KDEAALSCVEKAAGLCNAIFRRSARGMIESEMQKSNPKTLSALREQLTKTLEAPNTVMGLETLDVSQFSIASGLTPCIMH 240 RGTYNPQISVTEVSTQPLRSDVIVVRYGLKNCGYTAFIARTLISERNAPSNVKDVYKFVYNVTEKLLEHLRVGTRLSAVH 320 EEVMKYATTTNEALAKHLPKSLGFSTGLLVLEARGTISQKGTATVEDGMAFVTRVTLEGVPDGEGGTFDVELSDTVTVKG 400 GAAQLNTKTSRKLEEVLYDDSAEEETAFETSARDLNKITRQGQSSVPLLSRESAREEKLKTLLRELHAELAAAGGKKAKT 480 AVSEEFRTYEIARLSYGDVIPYANETSFPDVARGGGIYVDAEKEVAFFPVCGGVAAFHVSTISRVDVKFEGDQVAGIFSF 560 HSLQEGNIAYRLNRTKIFVKELTYRARRDIFTDVKIAIQGIQQRIKNRDTERRRVSLNAGGAQLQTVPDAIRLPQVKIRP 640 PATTGRYNKECIGNLEIHRNGLRFSYIGGAPIDMHFENIKHVIFQPAVNAVRVIYHITLKKGVEIARKSVDEVQFVAEVM 720 ESSETVMAARKGYEEEIAAEERELMRISDTNKQFLKFAQAVERVSMIKTQIPASNFSFEGVHAKGLTTFKANREVLWAIM 800 DRPPFTQRVEDIEVVSLERVIPGGSTFDVNLIFKDYNKPPASITTIPRSSLESLKDWCLAARLYYMETSVNPNWKVVLKT 880 IIEDEDWDPWRPGAGWAVLNDDFEGDEEASEDSDSDDSTYVEEEDETDETGSSFLDDEESEPESMTKRTVKVC 960 ................................................................................ 80 ................................................................................ 160 ........................P....................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...........................P.................................................... 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ......................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ Tbg972.3.6320 3 ----MSR|VT 0.081 . Tbg972.3.6320 10 VTLSASR|ME 0.068 . Tbg972.3.6320 13 SASRMEK|IV 0.270 . Tbg972.3.6320 19 KIVNAWR|KV 0.100 . Tbg972.3.6320 20 IVNAWRK|VP 0.124 . Tbg972.3.6320 47 ETLENQR|GQ 0.067 . Tbg972.3.6320 73 LFFSFDK|LL 0.055 . Tbg972.3.6320 102 SATLDEK|FG 0.057 . Tbg972.3.6320 115 AFVADAK|VG 0.052 . Tbg972.3.6320 121 KVGVCQK|EL 0.072 . Tbg972.3.6320 133 EGDFAPK|LI 0.070 . Tbg972.3.6320 139 KLISVVR|EI 0.131 . Tbg972.3.6320 146 EIVPAER|TV 0.103 . Tbg972.3.6320 161 GEFLFVK|DE 0.061 . Tbg972.3.6320 171 ALSCVEK|AA 0.095 . Tbg972.3.6320 181 LCNAIFR|RS 0.092 . Tbg972.3.6320 182 CNAIFRR|SA 0.459 . Tbg972.3.6320 185 IFRRSAR|GM 0.550 *ProP* Tbg972.3.6320 194 IESEMQK|SN 0.084 . Tbg972.3.6320 198 MQKSNPK|TL 0.073 . Tbg972.3.6320 204 KTLSALR|EQ 0.063 . Tbg972.3.6320 209 LREQLTK|TL 0.070 . Tbg972.3.6320 241 TPCIMHR|GT 0.113 . Tbg972.3.6320 259 VSTQPLR|SD 0.093 . Tbg972.3.6320 266 SDVIVVR|YG 0.081 . Tbg972.3.6320 270 VVRYGLK|NC 0.057 . Tbg972.3.6320 280 YTAFIAR|TL 0.102 . Tbg972.3.6320 286 RTLISER|NA 0.080 . Tbg972.3.6320 293 NAPSNVK|DV 0.079 . Tbg972.3.6320 297 NVKDVYK|FV 0.092 . Tbg972.3.6320 305 VYNVTEK|LL 0.068 . Tbg972.3.6320 311 KLLEHLR|VG 0.063 . Tbg972.3.6320 315 HLRVGTR|LS 0.085 . Tbg972.3.6320 325 VHEEVMK|YA 0.073 . Tbg972.3.6320 336 TNEALAK|HL 0.081 . Tbg972.3.6320 340 LAKHLPK|SL 0.109 . Tbg972.3.6320 354 LLVLEAR|GT 0.111 . Tbg972.3.6320 360 RGTISQK|GT 0.092 . Tbg972.3.6320 374 GMAFVTR|VT 0.127 . Tbg972.3.6320 399 SDTVTVK|GG 0.080 . Tbg972.3.6320 408 AAQLNTK|TS 0.062 . Tbg972.3.6320 411 LNTKTSR|KL 0.111 . Tbg972.3.6320 412 NTKTSRK|LE 0.075 . Tbg972.3.6320 433 AFETSAR|DL 0.170 . Tbg972.3.6320 437 SARDLNK|IT 0.097 . Tbg972.3.6320 440 DLNKITR|QG 0.092 . Tbg972.3.6320 451 SVPLLSR|ES 0.077 . Tbg972.3.6320 455 LSRESAR|EE 0.088 . Tbg972.3.6320 458 ESAREEK|LK 0.096 . Tbg972.3.6320 460 AREEKLK|TL 0.084 . Tbg972.3.6320 464 KLKTLLR|EL 0.104 . Tbg972.3.6320 476 LAAAGGK|KA 0.070 . Tbg972.3.6320 477 AAAGGKK|AK 0.110 . Tbg972.3.6320 479 AGGKKAK|TA 0.086 . Tbg972.3.6320 487 AVSEEFR|TY 0.109 . Tbg972.3.6320 493 RTYEIAR|LS 0.080 . Tbg972.3.6320 513 SFPDVAR|GG 0.135 . Tbg972.3.6320 523 IYVDAEK|EV 0.060 . Tbg972.3.6320 544 HVSTISR|VD 0.095 . Tbg972.3.6320 548 ISRVDVK|FE 0.094 . Tbg972.3.6320 571 EGNIAYR|LN 0.088 . Tbg972.3.6320 574 IAYRLNR|TK 0.178 . Tbg972.3.6320 576 YRLNRTK|IF 0.066 . Tbg972.3.6320 580 RTKIFVK|EL 0.059 . Tbg972.3.6320 585 VKELTYR|AR 0.099 . Tbg972.3.6320 587 ELTYRAR|RD 0.072 . Tbg972.3.6320 588 LTYRARR|DI 0.536 *ProP* Tbg972.3.6320 595 DIFTDVK|IA 0.070 . Tbg972.3.6320 604 IQGIQQR|IK 0.080 . Tbg972.3.6320 606 GIQQRIK|NR 0.069 . Tbg972.3.6320 608 QQRIKNR|DT 0.161 . Tbg972.3.6320 612 KNRDTER|RR 0.072 . Tbg972.3.6320 613 NRDTERR|RV 0.202 . Tbg972.3.6320 614 RDTERRR|VS 0.105 . Tbg972.3.6320 632 TVPDAIR|LP 0.068 . Tbg972.3.6320 637 IRLPQVK|IR 0.063 . Tbg972.3.6320 639 LPQVKIR|PP 0.108 . Tbg972.3.6320 646 PPATTGR|YN 0.114 . Tbg972.3.6320 649 TTGRYNK|EC 0.160 . Tbg972.3.6320 659 GNLEIHR|NG 0.060 . Tbg972.3.6320 663 IHRNGLR|FS 0.095 . Tbg972.3.6320 680 MHFENIK|HV 0.074 . Tbg972.3.6320 692 PAVNAVR|VI 0.076 . Tbg972.3.6320 700 IYHITLK|KG 0.056 . Tbg972.3.6320 701 YHITLKK|GV 0.179 . Tbg972.3.6320 707 KGVEIAR|KS 0.085 . Tbg972.3.6320 708 GVEIARK|SV 0.240 . Tbg972.3.6320 730 ETVMAAR|KG 0.087 . Tbg972.3.6320 731 TVMAARK|GY 0.106 . Tbg972.3.6320 742 EIAAEER|EL 0.089 . Tbg972.3.6320 746 EERELMR|IS 0.093 . Tbg972.3.6320 752 RISDTNK|QF 0.065 . Tbg972.3.6320 756 TNKQFLK|FA 0.105 . Tbg972.3.6320 763 FAQAVER|VS 0.085 . Tbg972.3.6320 768 ERVSMIK|TQ 0.064 . Tbg972.3.6320 784 FEGVHAK|GL 0.080 . Tbg972.3.6320 790 KGLTTFK|AN 0.068 . Tbg972.3.6320 793 TTFKANR|EV 0.119 . Tbg972.3.6320 802 LWAIMDR|PP 0.096 . Tbg972.3.6320 808 RPPFTQR|VE 0.087 . Tbg972.3.6320 819 EVVSLER|VI 0.065 . Tbg972.3.6320 834 DVNLIFK|DY 0.069 . Tbg972.3.6320 838 IFKDYNK|PP 0.056 . Tbg972.3.6320 848 SITTIPR|SS 0.128 . Tbg972.3.6320 855 SSLESLK|DW 0.067 . Tbg972.3.6320 862 DWCLAAR|LY 0.078 . Tbg972.3.6320 875 SVNPNWK|VV 0.079 . Tbg972.3.6320 879 NWKVVLK|TI 0.074 . Tbg972.3.6320 891 EDWDPWR|PG 0.074 . Tbg972.3.6320 947 EPESMTK|RT 0.062 . Tbg972.3.6320 948 PESMTKR|TV 0.298 . Tbg972.3.6320 951 MTKRTVK|VC 0.129 . ____________________________^_________________

  • Fasta :-

    >Tbg972.3.6320 ATGTCGCGTGTTACCCTTTCCGCATCTCGCATGGAGAAAATAGTTAACGCATGGAGGAAA GTCCCTGATGCAGCGGAAGGTTGTTCAGTTATGTGTTGTGTATTTGGTGCGCTTACGCCT GAGACACTTGAAAACCAACGTGGGCAGGCAATGCTGCAATACCTTTTTACGTCGCTGAAT ACTGTGTGCAACGCTGCCTTGTTCTTTTCCTTTGATAAGCTACTGGTTGTACATTCCAAC CTCAATGTTGAGCTGCCGCCCTCATCAGAGAGCTTTACCTACGCTTCTGCAACGTTGGAC GAGAAGTTTGGTGAGATTCTCGCAGCATTTGTTGCTGATGCAAAAGTTGGAGTGTGTCAA AAGGAGTTGAACATACAAGAGGGTGATTTTGCACCAAAGCTAATTTCAGTCGTTCGAGAA ATTGTTCCCGCTGAGCGTACGGTTGAAGTTGGACCCCTTCTGGGTGAGTTCCTTTTTGTG AAGGACGAGGCAGCACTTTCCTGTGTGGAGAAAGCGGCAGGACTTTGTAACGCTATATTC CGCCGCTCCGCCCGCGGGATGATTGAGTCGGAAATGCAAAAGAGTAATCCTAAAACACTG AGCGCCTTGCGGGAGCAGTTAACGAAAACCCTCGAGGCACCAAATACCGTCATGGGTTTG GAAACACTTGATGTCTCTCAGTTCTCAATTGCGTCCGGTTTGACACCATGTATTATGCAC CGTGGGACTTATAATCCTCAAATTAGTGTCACAGAGGTGAGTACCCAACCGCTGCGGAGT GATGTCATCGTCGTCCGATACGGATTGAAGAATTGCGGCTACACCGCTTTCATCGCCCGT ACGCTCATCTCGGAACGAAATGCCCCAAGCAACGTGAAGGACGTCTACAAGTTTGTGTAC AACGTAACCGAAAAACTGTTAGAGCACCTTCGTGTGGGGACGCGTCTCAGTGCCGTGCAT GAAGAAGTAATGAAGTATGCAACCACTACAAACGAAGCTCTTGCGAAGCACCTTCCCAAG TCTTTGGGTTTCTCGACTGGATTGTTGGTGCTTGAGGCACGCGGGACAATATCTCAGAAA GGAACTGCAACAGTTGAAGACGGAATGGCTTTTGTAACTCGGGTTACTCTCGAAGGGGTG CCGGATGGTGAAGGCGGTACATTCGACGTGGAGCTGTCCGACACAGTCACAGTAAAAGGT GGCGCTGCACAACTCAACACCAAAACATCACGTAAGCTTGAGGAGGTCCTCTACGATGAC AGTGCAGAAGAGGAAACTGCATTCGAAACAAGTGCGCGGGACTTAAATAAGATAACACGG CAAGGACAGAGTAGCGTTCCACTACTCTCGCGGGAATCGGCACGAGAGGAAAAACTCAAG ACGCTTTTAAGGGAACTACATGCGGAGTTGGCCGCGGCTGGTGGGAAAAAAGCCAAAACT GCCGTCTCAGAAGAGTTTCGTACGTACGAAATTGCACGTCTTTCCTACGGCGACGTCATT CCTTACGCGAATGAAACGTCGTTCCCGGATGTGGCGCGTGGTGGTGGCATTTATGTAGAC GCGGAAAAGGAGGTGGCGTTCTTTCCCGTATGCGGGGGTGTGGCGGCGTTTCATGTCTCG ACCATAAGTCGAGTTGACGTGAAGTTTGAAGGGGACCAAGTGGCGGGTATTTTCTCATTT CATTCGCTTCAGGAAGGAAATATCGCCTACCGTTTGAACCGCACTAAAATATTCGTCAAA GAGCTGACGTACCGTGCGCGCCGTGACATCTTCACCGATGTGAAGATTGCCATTCAGGGT ATTCAGCAACGCATCAAAAATAGAGATACGGAGCGACGCCGTGTTTCATTGAATGCTGGA GGTGCTCAGCTGCAAACAGTTCCTGATGCGATTCGGCTTCCACAGGTAAAGATTCGACCC CCAGCGACAACAGGACGTTATAACAAAGAATGCATTGGAAACTTGGAGATTCATCGGAAT GGATTGCGCTTTTCATATATTGGTGGGGCACCAATTGACATGCATTTTGAAAACATCAAG CATGTTATATTCCAACCCGCTGTCAATGCTGTTCGGGTTATTTACCACATCACCTTGAAG AAGGGTGTGGAGATTGCCCGGAAGAGTGTGGATGAGGTTCAGTTCGTTGCGGAGGTTATG GAAAGCAGCGAAACTGTTATGGCTGCGCGAAAAGGGTATGAAGAGGAAATTGCAGCGGAA GAGCGTGAACTTATGCGCATCAGTGACACAAACAAACAATTCCTGAAGTTTGCTCAGGCC GTTGAAAGGGTCAGCATGATCAAAACGCAAATACCTGCTAGCAATTTTTCCTTTGAAGGC GTTCATGCCAAGGGCTTAACAACATTCAAAGCCAATCGCGAAGTGTTATGGGCGATTATG GACCGGCCTCCGTTTACACAGCGTGTGGAGGATATCGAGGTTGTGTCGCTTGAGCGCGTT ATACCTGGTGGATCCACTTTTGATGTGAACCTTATTTTCAAGGACTACAACAAACCGCCG GCGAGCATCACCACAATACCTCGTAGCAGCCTAGAGTCTCTAAAAGACTGGTGTCTTGCA GCGCGACTTTACTACATGGAGACGAGCGTTAATCCAAACTGGAAGGTGGTACTGAAAACA ATTATCGAAGACGAAGATTGGGATCCGTGGAGGCCAGGAGCCGGTTGGGCAGTACTCAAT GATGATTTCGAGGGAGATGAAGAAGCCTCTGAAGACTCTGATTCAGATGATTCCACTTAT GTTGAAGAAGAAGATGAAACCGATGAGACGGGGAGTTCCTTTCTTGACGATGAGGAGAGT GAACCCGAGTCCATGACGAAGAGGACAGTGAAAGTGTGTTGA
  • Download Fasta

  • Fasta :-

    MSRVTLSASRMEKIVNAWRKVPDAAEGCSVMCCVFGALTPETLENQRGQAMLQYLFTSLN TVCNAALFFSFDKLLVVHSNLNVELPPSSESFTYASATLDEKFGEILAAFVADAKVGVCQ KELNIQEGDFAPKLISVVREIVPAERTVEVGPLLGEFLFVKDEAALSCVEKAAGLCNAIF RRSARGMIESEMQKSNPKTLSALREQLTKTLEAPNTVMGLETLDVSQFSIASGLTPCIMH RGTYNPQISVTEVSTQPLRSDVIVVRYGLKNCGYTAFIARTLISERNAPSNVKDVYKFVY NVTEKLLEHLRVGTRLSAVHEEVMKYATTTNEALAKHLPKSLGFSTGLLVLEARGTISQK GTATVEDGMAFVTRVTLEGVPDGEGGTFDVELSDTVTVKGGAAQLNTKTSRKLEEVLYDD SAEEETAFETSARDLNKITRQGQSSVPLLSRESAREEKLKTLLRELHAELAAAGGKKAKT AVSEEFRTYEIARLSYGDVIPYANETSFPDVARGGGIYVDAEKEVAFFPVCGGVAAFHVS TISRVDVKFEGDQVAGIFSFHSLQEGNIAYRLNRTKIFVKELTYRARRDIFTDVKIAIQG IQQRIKNRDTERRRVSLNAGGAQLQTVPDAIRLPQVKIRPPATTGRYNKECIGNLEIHRN GLRFSYIGGAPIDMHFENIKHVIFQPAVNAVRVIYHITLKKGVEIARKSVDEVQFVAEVM ESSETVMAARKGYEEEIAAEERELMRISDTNKQFLKFAQAVERVSMIKTQIPASNFSFEG VHAKGLTTFKANREVLWAIMDRPPFTQRVEDIEVVSLERVIPGGSTFDVNLIFKDYNKPP ASITTIPRSSLESLKDWCLAARLYYMETSVNPNWKVVLKTIIEDEDWDPWRPGAGWAVLN DDFEGDEEASEDSDSDDSTYVEEEDETDETGSSFLDDEESEPESMTKRTVKVC

  • title: active site
  • coordinates: M239,R259,F277,F344,R374,S393
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.3.6320616 SRRRVSLNAG0.993unspTbg972.3.6320616 SRRRVSLNAG0.993unspTbg972.3.6320616 SRRRVSLNAG0.993unspTbg972.3.6320765 SVERVSMIKT0.99unspTbg972.3.6320850 SIPRSSLESL0.997unspTbg972.3.6320853 SSSLESLKDW0.998unspTbg972.3.6320913 SASEDSDSDD0.995unspTbg972.3.6320918 SDSDDSTYVE0.991unspTbg972.3.6320453 SLSRESAREE0.997unspTbg972.3.6320495 SIARLSYGDV0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India