Tbg972.4.3310 | mitochondrial ATP-dependent zinc metallopeptidase, putative

UniProt_ID:

Computed_GO_Component_IDs: GO:0016020
Computed_GO_Components: membrane
Computed_GO_Function_IDs: GO:0005524 GO:0004222
Computed_GO_Functions: ATP binding metalloendopeptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	Tbg972.4.3310	mTP	0.318933	0.130398	0.550668	CS pos: 23-24. KCF-CA. Pr: 0.5961

No Results

Fasta :-
>Tbg972.4.3310 MFRIPRSAHLSFAAAALQTSKCFCATGSNSDGKADAPKEGEKATVAGGVSSKSRSNNNTS NTNTSDSNAAVGRAPGLSSEKRYPKGFEAFYSVSLLRRLPFSRPSSESVNRAYAMSSDER MLIAIISAKARKARRVRMLVIFSCLFGVTMAVRFYFLHSRAEGDISGYTTVEVDLAGHRA VFRGQKGEALGVRNFVDYRAFEASCDSNKDILVGIQTYYPWVPMLLLCLLPLLALTHSLF NTSARLASLTAEKSSYSFKRELSVATRLSDVAGLTEAKHEVVEVIDFLKNPSRYQALGAK LPKGVLLDGPPGVGKTLLAKAIAGEAMVPFLSCSGSEFEEVYVGVGAQRARELFKQAHEC KPCVVFVDEIDAFGRKRKSDSGGSLRGTLNAFLSEMDGFKDSTGIMVLAATNRADILDNA LTRSGRFDRKITLEKPSHKDRVAIAEVHLAPLKLEPSGTIRGFAETVAALTPGCSGADIF NICNEAAIQAAREGKEYVSTRHFHQAVDRVLVGLEKSAVKLSDAERERISFHEAGKVVLH WFQEKTDPVIKTTILPRGQHRSGVTQKLPQTAFISTQEQLMQGMVAQLGGYVAEEYFFKD VSTSAADDVQHATNRARQVVCTYGMDPENIGHFGYNLDQEDSIQKPFGPLKEDIVDEAVH KLITEALNRARSILKQYLREVRALAGLLARQETLTAHELWLLLGDRPVMTKEFRTYLES
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/148 Sequence name : 148 Sequence length : 719 VALUES OF COMPUTED PARAMETERS Coef20 : 4.812 CoefTot : 0.776 ChDiff : 10 ZoneTo : 30 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.029 2.171 0.330 0.758 MesoH : -0.219 0.545 -0.274 0.245 MuHd_075 : 16.480 8.245 3.355 4.305 MuHd_095 : 28.496 12.028 7.513 6.368 MuHd_100 : 24.684 10.417 5.829 5.282 MuHd_105 : 23.381 9.282 4.818 4.468 Hmax_075 : 11.300 12.000 2.003 4.180 Hmax_095 : 14.000 13.800 1.643 5.220 Hmax_100 : 14.800 11.500 3.378 5.220 Hmax_105 : 10.800 13.387 0.432 4.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6989 0.3011 DFMC : 0.5551 0.4449

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 719 Tbg972.4.3310 MFRIPRSAHLSFAAAALQTSKCFCATGSNSDGKADAPKEGEKATVAGGVSSKSRSNNNTSNTNTSDSNAAVGRAPGLSSE 80 KRYPKGFEAFYSVSLLRRLPFSRPSSESVNRAYAMSSDERMLIAIISAKARKARRVRMLVIFSCLFGVTMAVRFYFLHSR 160 AEGDISGYTTVEVDLAGHRAVFRGQKGEALGVRNFVDYRAFEASCDSNKDILVGIQTYYPWVPMLLLCLLPLLALTHSLF 240 NTSARLASLTAEKSSYSFKRELSVATRLSDVAGLTEAKHEVVEVIDFLKNPSRYQALGAKLPKGVLLDGPPGVGKTLLAK 320 AIAGEAMVPFLSCSGSEFEEVYVGVGAQRARELFKQAHECKPCVVFVDEIDAFGRKRKSDSGGSLRGTLNAFLSEMDGFK 400 DSTGIMVLAATNRADILDNALTRSGRFDRKITLEKPSHKDRVAIAEVHLAPLKLEPSGTIRGFAETVAALTPGCSGADIF 480 NICNEAAIQAAREGKEYVSTRHFHQAVDRVLVGLEKSAVKLSDAERERISFHEAGKVVLHWFQEKTDPVIKTTILPRGQH 560 RSGVTQKLPQTAFISTQEQLMQGMVAQLGGYVAEEYFFKDVSTSAADDVQHATNRARQVVCTYGMDPENIGHFGYNLDQE 640 DSIQKPFGPLKEDIVDEAVHKLITEALNRARSILKQYLREVRALAGLLARQETLTAHELWLLLGDRPVMTKEFRTYLES 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

Fasta :-
>Tbg972.4.3310 ATGTTTAGGATACCCCGATCAGCCCACTTGTCATTTGCCGCGGCGGCCCTTCAAACATCC AAGTGTTTTTGTGCAACTGGCAGCAATAGTGACGGAAAGGCCGACGCACCGAAGGAGGGC GAGAAGGCAACAGTTGCAGGAGGTGTTTCCTCAAAGTCCAGAAGCAACAACAATACCAGC AATACCAACACCAGTGATAGCAATGCCGCTGTCGGGCGCGCGCCGGGGCTCTCATCTGAG AAACGCTACCCCAAAGGTTTTGAGGCATTTTACTCGGTGTCGTTACTGCGGAGGCTTCCA TTTTCACGCCCTTCTTCGGAATCTGTGAATCGTGCCTACGCAATGTCTTCTGACGAGCGT ATGCTCATAGCCATTATTTCAGCCAAGGCACGCAAGGCGAGACGTGTACGGATGTTGGTC ATCTTTTCGTGTTTGTTTGGAGTCACGATGGCGGTGCGCTTTTACTTTTTGCATTCGCGC GCAGAAGGGGACATCAGTGGCTATACCACTGTGGAAGTGGATTTGGCGGGACACAGGGCG GTCTTCCGTGGGCAAAAGGGCGAGGCTCTTGGCGTACGGAACTTCGTAGATTACAGGGCT TTTGAAGCTTCATGTGATAGTAACAAGGATATACTCGTTGGAATCCAAACGTATTACCCA TGGGTGCCTATGTTACTCCTTTGTCTCTTGCCCCTTTTGGCCCTAACGCATTCCTTATTT AACACATCGGCCAGGCTCGCATCCCTCACGGCAGAGAAGAGTAGTTATTCATTCAAGCGT GAACTTTCCGTCGCCACTCGGCTAAGTGATGTGGCGGGGTTAACTGAGGCAAAACACGAG GTGGTTGAAGTGATTGATTTCTTGAAGAACCCCAGCCGCTACCAGGCACTTGGGGCCAAA CTTCCCAAAGGCGTTCTGCTTGACGGGCCACCTGGTGTGGGGAAAACACTTCTCGCGAAA GCCATTGCTGGTGAGGCCATGGTTCCTTTTCTCAGTTGTTCCGGAAGTGAGTTTGAGGAA GTGTACGTCGGCGTTGGAGCGCAGCGTGCTCGGGAACTCTTCAAACAAGCTCACGAGTGC AAGCCGTGCGTCGTTTTTGTGGATGAAATCGATGCCTTCGGGAGGAAAAGAAAATCCGAC TCCGGAGGGAGCCTGCGAGGTACGCTGAATGCGTTTCTTTCTGAAATGGATGGTTTCAAG GATTCCACAGGAATAATGGTACTGGCAGCCACTAATCGAGCCGACATTCTCGACAACGCC CTCACGCGCTCCGGGCGTTTCGACCGGAAGATAACGCTGGAAAAACCTTCACATAAGGAT AGGGTTGCCATCGCCGAGGTTCACTTGGCTCCACTTAAGCTTGAGCCGTCGGGAACTATT CGGGGCTTCGCAGAAACCGTCGCCGCGCTTACCCCTGGATGCAGTGGTGCGGATATATTT AACATTTGCAACGAGGCCGCTATCCAAGCCGCGAGGGAGGGAAAGGAATACGTCTCAACA CGCCATTTCCACCAAGCAGTGGACCGAGTGCTAGTTGGATTGGAGAAGAGTGCAGTGAAG CTGAGCGATGCGGAGCGGGAGCGCATTTCATTTCATGAAGCGGGTAAGGTCGTTCTTCAT TGGTTTCAAGAGAAAACCGATCCCGTCATCAAAACCACTATCCTTCCTCGTGGGCAGCAT CGCTCCGGCGTAACCCAAAAGTTGCCTCAAACCGCTTTTATTTCGACGCAGGAACAACTC ATGCAAGGTATGGTGGCACAGTTGGGAGGCTACGTAGCGGAGGAGTACTTCTTTAAGGAC GTCTCAACATCTGCTGCAGATGATGTGCAGCATGCTACAAACAGGGCGCGACAGGTGGTC TGCACATACGGGATGGATCCCGAGAATATTGGTCACTTTGGTTACAACTTAGACCAGGAA GACAGCATTCAGAAACCGTTTGGACCATTAAAGGAGGATATTGTGGATGAGGCCGTTCAC AAGCTCATCACCGAGGCGCTCAACAGGGCGCGGTCCATATTAAAACAATATCTTAGGGAA GTGCGTGCACTGGCGGGCCTTTTGGCAAGACAAGAGACACTTACGGCGCACGAGCTTTGG CTTTTACTTGGCGACCGTCCTGTCATGACAAAAGAGTTCCGCACTTATCTGGAGAGCTAA
Download Fasta

Fasta :-

MFRIPRSAHLSFAAAALQTSKCFCATGSNSDGKADAPKEGEKATVAGGVSSKSRSNNNTS NTNTSDSNAAVGRAPGLSSEKRYPKGFEAFYSVSLLRRLPFSRPSSESVNRAYAMSSDER MLIAIISAKARKARRVRMLVIFSCLFGVTMAVRFYFLHSRAEGDISGYTTVEVDLAGHRA VFRGQKGEALGVRNFVDYRAFEASCDSNKDILVGIQTYYPWVPMLLLCLLPLLALTHSLF NTSARLASLTAEKSSYSFKRELSVATRLSDVAGLTEAKHEVVEVIDFLKNPSRYQALGAK LPKGVLLDGPPGVGKTLLAKAIAGEAMVPFLSCSGSEFEEVYVGVGAQRARELFKQAHEC KPCVVFVDEIDAFGRKRKSDSGGSLRGTLNAFLSEMDGFKDSTGIMVLAATNRADILDNA LTRSGRFDRKITLEKPSHKDRVAIAEVHLAPLKLEPSGTIRGFAETVAALTPGCSGADIF NICNEAAIQAAREGKEYVSTRHFHQAVDRVLVGLEKSAVKLSDAERERISFHEAGKVVLH WFQEKTDPVIKTTILPRGQHRSGVTQKLPQTAFISTQEQLMQGMVAQLGGYVAEEYFFKD VSTSAADDVQHATNRARQVVCTYGMDPENIGHFGYNLDQEDSIQKPFGPLKEDIVDEAVH KLITEALNRARSILKQYLREVRALAGLLARQETLTAHELWLLLGDRPVMTKEFRTYLES

Extended AAA-ATPase domain

title: ATP binding site
coordinates: P310,P311,G312,V313,G314,K315,T316,L317,D368,N412

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	Tbg972.4.3310	257 S	KSSYSFKRE	0.993	unsp	Tbg972.4.3310	257 S	KSSYSFKRE	0.993	unsp	Tbg972.4.3310	257 S	KSSYSFKRE	0.993	unsp	Tbg972.4.3310	379 S	RKRKSDSGG	0.997	unsp	Tbg972.4.3310	381 S	RKSDSGGSL	0.992	unsp	Tbg972.4.3310	437 S	LEKPSHKDR	0.998	unsp	Tbg972.4.3310	530 S	RERISFHEA	0.995	unsp	Tbg972.4.3310	604 S	DVSTSAADD	0.992	unsp	Tbg972.4.3310	106 S	SRPSSESVN	0.995	unsp	Tbg972.4.3310	207 S	ASCDSNKDI	0.992	unsp

Tbg972.4.3310 | mitochondrial ATP-dependent zinc metallopeptidase, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs: GO:0016020

Computed_GO_Components: membrane

Computed_GO_Function_IDs: GO:0005524 GO:0004222

Computed_GO_Functions: ATP binding metalloendopeptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Extended AAA-ATPase domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India