Tbg972.4.3850 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.4.3850OTHER0.9997160.0001540.000130
No Results

  • Fasta :-

    >Tbg972.4.3850 MVPVKVKWGRETFELTVDLRSTVKCFKEQLQQLTSVPVERQKIMGVKASQCNDNEVTLEA AGVAAGKTLMLIGTAAEVVRATPIVATGNKDSAVQAPASHPAEKQAVGLQNIANTCYMNA AVQMLRLVPEVRDVLNFNANDPIVSELLKLYNTMDTKRDPVVPASLWSILLAHFPTFAEV NEKGHPMQHDSQEALNALLQRINSCLPESHKRLFTGNLSQKMVCKDDPDDQPVLHDVPFL MLSCNIDAEIETLEAGLEAAFNETVKLHSEKLAREALHTRTSRIATMPEYLFIHMVRFSW RSDIQSKAKILKPVTFPMTLDLHALCAEEYKPELEVERKRVLKRRDIEMERRRAAKNKTK LDDDEAAPADDASNTAEPINTTVGNHSGYYELCGVISHKGRSADSGHYVFWGKYADQWMV LDDSNTAAVSEEDVKRLRGSGEAHIAYVLMYRSRDPRTKQSVIPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/20 Sequence name : 20 Sequence length : 465 VALUES OF COMPUTED PARAMETERS Coef20 : 4.026 CoefTot : -0.594 ChDiff : -6 ZoneTo : 10 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.476 0.117 0.634 MesoH : -0.363 0.367 -0.338 0.208 MuHd_075 : 19.474 7.286 3.492 4.046 MuHd_095 : 38.237 14.562 7.906 5.122 MuHd_100 : 36.690 14.634 8.625 4.892 MuHd_105 : 31.240 11.545 8.581 4.048 Hmax_075 : 3.000 4.987 -1.600 3.910 Hmax_095 : 7.262 10.763 -0.169 3.561 Hmax_100 : 4.900 10.400 -0.082 3.430 Hmax_105 : 14.350 10.967 2.173 4.608 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7023 0.2977 DFMC : 0.7501 0.2499
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 465 Tbg972.4.3850 MVPVKVKWGRETFELTVDLRSTVKCFKEQLQQLTSVPVERQKIMGVKASQCNDNEVTLEAAGVAAGKTLMLIGTAAEVVR 80 ATPIVATGNKDSAVQAPASHPAEKQAVGLQNIANTCYMNAAVQMLRLVPEVRDVLNFNANDPIVSELLKLYNTMDTKRDP 160 VVPASLWSILLAHFPTFAEVNEKGHPMQHDSQEALNALLQRINSCLPESHKRLFTGNLSQKMVCKDDPDDQPVLHDVPFL 240 MLSCNIDAEIETLEAGLEAAFNETVKLHSEKLAREALHTRTSRIATMPEYLFIHMVRFSWRSDIQSKAKILKPVTFPMTL 320 DLHALCAEEYKPELEVERKRVLKRRDIEMERRRAAKNKTKLDDDEAAPADDASNTAEPINTTVGNHSGYYELCGVISHKG 400 RSADSGHYVFWGKYADQWMVLDDSNTAAVSEEDVKRLRGSGEAHIAYVLMYRSRDPRTKQSVIPL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.4.3850 5 --MVPVK|VK 0.062 . Tbg972.4.3850 7 MVPVKVK|WG 0.061 . Tbg972.4.3850 10 VKVKWGR|ET 0.104 . Tbg972.4.3850 20 ELTVDLR|ST 0.110 . Tbg972.4.3850 24 DLRSTVK|CF 0.066 . Tbg972.4.3850 27 STVKCFK|EQ 0.066 . Tbg972.4.3850 40 TSVPVER|QK 0.120 . Tbg972.4.3850 42 VPVERQK|IM 0.070 . Tbg972.4.3850 47 QKIMGVK|AS 0.063 . Tbg972.4.3850 67 AGVAAGK|TL 0.065 . Tbg972.4.3850 80 TAAEVVR|AT 0.113 . Tbg972.4.3850 90 IVATGNK|DS 0.069 . Tbg972.4.3850 104 ASHPAEK|QA 0.078 . Tbg972.4.3850 126 AAVQMLR|LV 0.100 . Tbg972.4.3850 132 RLVPEVR|DV 0.110 . Tbg972.4.3850 149 IVSELLK|LY 0.062 . Tbg972.4.3850 157 YNTMDTK|RD 0.057 . Tbg972.4.3850 158 NTMDTKR|DP 0.129 . Tbg972.4.3850 183 FAEVNEK|GH 0.062 . Tbg972.4.3850 201 LNALLQR|IN 0.101 . Tbg972.4.3850 211 CLPESHK|RL 0.064 . Tbg972.4.3850 212 LPESHKR|LF 0.200 . Tbg972.4.3850 221 TGNLSQK|MV 0.094 . Tbg972.4.3850 225 SQKMVCK|DD 0.084 . Tbg972.4.3850 266 AFNETVK|LH 0.067 . Tbg972.4.3850 271 VKLHSEK|LA 0.084 . Tbg972.4.3850 274 HSEKLAR|EA 0.113 . Tbg972.4.3850 280 REALHTR|TS 0.092 . Tbg972.4.3850 283 LHTRTSR|IA 0.237 . Tbg972.4.3850 297 LFIHMVR|FS 0.103 . Tbg972.4.3850 301 MVRFSWR|SD 0.190 . Tbg972.4.3850 307 RSDIQSK|AK 0.067 . Tbg972.4.3850 309 DIQSKAK|IL 0.076 . Tbg972.4.3850 312 SKAKILK|PV 0.079 . Tbg972.4.3850 331 LCAEEYK|PE 0.062 . Tbg972.4.3850 338 PELEVER|KR 0.066 . Tbg972.4.3850 339 ELEVERK|RV 0.091 . Tbg972.4.3850 340 LEVERKR|VL 0.121 . Tbg972.4.3850 343 ERKRVLK|RR 0.129 . Tbg972.4.3850 344 RKRVLKR|RD 0.240 . Tbg972.4.3850 345 KRVLKRR|DI 0.441 . Tbg972.4.3850 351 RDIEMER|RR 0.072 . Tbg972.4.3850 352 DIEMERR|RA 0.112 . Tbg972.4.3850 353 IEMERRR|AA 0.171 . Tbg972.4.3850 356 ERRRAAK|NK 0.207 . Tbg972.4.3850 358 RRAAKNK|TK 0.080 . Tbg972.4.3850 360 AAKNKTK|LD 0.066 . Tbg972.4.3850 399 CGVISHK|GR 0.068 . Tbg972.4.3850 401 VISHKGR|SA 0.398 . Tbg972.4.3850 413 HYVFWGK|YA 0.078 . Tbg972.4.3850 435 VSEEDVK|RL 0.062 . Tbg972.4.3850 436 SEEDVKR|LR 0.244 . Tbg972.4.3850 438 EDVKRLR|GS 0.101 . Tbg972.4.3850 452 AYVLMYR|SR 0.111 . Tbg972.4.3850 454 VLMYRSR|DP 0.114 . Tbg972.4.3850 457 YRSRDPR|TK 0.366 . Tbg972.4.3850 459 SRDPRTK|QS 0.067 . ____________________________^_________________

  • Fasta :-

    >Tbg972.4.3850 ATGGTTCCTGTTAAAGTGAAATGGGGTAGAGAAACATTTGAACTTACGGTGGACCTCAGA AGCACCGTTAAGTGTTTCAAGGAGCAGTTGCAGCAACTCACATCGGTACCAGTGGAGCGT CAAAAGATTATGGGAGTAAAAGCCTCTCAGTGCAATGATAACGAGGTAACGTTAGAAGCG GCTGGCGTAGCGGCCGGAAAAACGCTAATGCTCATCGGCACCGCTGCTGAGGTTGTAAGA GCAACGCCGATTGTGGCTACTGGGAACAAGGATTCGGCAGTGCAAGCACCTGCTTCCCAT CCTGCAGAAAAACAGGCAGTCGGTCTGCAAAACATTGCGAATACATGTTACATGAATGCA GCCGTGCAAATGCTGCGATTAGTTCCTGAAGTGCGCGACGTACTTAACTTCAATGCGAAT GACCCAATAGTGAGCGAACTTCTGAAGCTCTACAACACGATGGACACTAAACGTGATCCA GTTGTACCGGCATCTCTTTGGTCCATTTTGTTGGCCCATTTCCCCACATTTGCTGAAGTT AATGAAAAGGGTCACCCAATGCAACATGATTCGCAAGAGGCCCTTAACGCCTTACTCCAA CGTATTAACAGTTGCCTACCAGAGTCACATAAGCGACTCTTCACCGGAAATCTATCGCAA AAAATGGTCTGCAAGGATGATCCTGATGACCAACCCGTATTGCATGATGTCCCATTTCTC ATGCTTTCGTGCAATATTGACGCAGAAATTGAAACTTTAGAGGCTGGGCTTGAAGCGGCC TTCAATGAAACGGTTAAACTCCACTCGGAGAAACTTGCGCGCGAGGCCCTTCACACTCGG ACCAGTCGTATCGCTACAATGCCCGAGTATCTTTTCATACACATGGTTCGCTTCTCTTGG AGGTCAGACATTCAAAGCAAGGCAAAGATTTTGAAGCCCGTTACCTTCCCAATGACGCTT GACCTTCATGCGCTATGCGCGGAGGAGTACAAACCTGAACTGGAGGTGGAGCGAAAGCGA GTGTTAAAGCGGCGGGATATTGAAATGGAGCGTCGCCGAGCCGCAAAGAATAAAACAAAG TTGGATGATGACGAAGCGGCACCTGCGGACGATGCCTCCAACACTGCGGAACCAATCAAC ACTACCGTAGGGAATCACAGCGGTTATTATGAGTTATGTGGTGTTATATCTCACAAGGGG CGTAGCGCGGACAGCGGGCATTACGTGTTTTGGGGAAAATACGCGGATCAATGGATGGTG TTGGATGACAGTAACACGGCAGCGGTTTCGGAGGAGGATGTGAAGCGACTTCGAGGTTCA GGTGAAGCCCACATTGCGTATGTCCTCATGTACCGCTCAAGAGACCCTCGCACGAAGCAG TCGGTCATTCCGCTGTAG
  • Download Fasta

  • Fasta :-

    MVPVKVKWGRETFELTVDLRSTVKCFKEQLQQLTSVPVERQKIMGVKASQCNDNEVTLEA AGVAAGKTLMLIGTAAEVVRATPIVATGNKDSAVQAPASHPAEKQAVGLQNIANTCYMNA AVQMLRLVPEVRDVLNFNANDPIVSELLKLYNTMDTKRDPVVPASLWSILLAHFPTFAEV NEKGHPMQHDSQEALNALLQRINSCLPESHKRLFTGNLSQKMVCKDDPDDQPVLHDVPFL MLSCNIDAEIETLEAGLEAAFNETVKLHSEKLAREALHTRTSRIATMPEYLFIHMVRFSW RSDIQSKAKILKPVTFPMTLDLHALCAEEYKPELEVERKRVLKRRDIEMERRRAAKNKTK LDDDEAAPADDASNTAEPINTTVGNHSGYYELCGVISHKGRSADSGHYVFWGKYADQWMV LDDSNTAAVSEEDVKRLRGSGEAHIAYVLMYRSRDPRTKQSVIPL

  • title: Active Site
  • coordinates: N111,C116,H407,D423
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.4.3850430 STAAVSEEDV0.996unspTbg972.4.3850430 STAAVSEEDV0.996unspTbg972.4.3850430 STAAVSEEDV0.996unspTbg972.4.3850440 SRLRGSGEAH0.996unspTbg972.4.3850209 SCLPESHKRL0.994unspTbg972.4.3850269 SVKLHSEKLA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India