Tbg972.4.500 | Peptidase family C78, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005634      

  • Curated_GO_Components:  nucleus      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.4.500OTHER0.9999220.0000360.000042
No Results

  • Fasta :-

    >Tbg972.4.500 MATVANEFATLDEGVLPILVVRKNGKTIAVVRDNSLQGTFLPFYLPTCETLHVSRTEELQ EARESGVLNVAAVEWPVVAKLRMALGILKEERYWLLFSRGGVSNEGLTSHMFKGDEEGVH DAVSWLSGFQLSGPCDILLASEPSVTNGPANGDVGRLRLKKEDEDVNERVVFGESATDVA RYIGDLLRAHLFQNVTAPTAVFWPPQLVHPVNIHYGMANQRVLEHDALLLPILSLFRVEK RLKNWDAVKGLQVSAGCDMPRTGQAWEKHLVRNIHKSLKEYIPVSGGEVYITSGSYDYYH YLIDGFKDSGWGCAYRSLQTILSWFQYEGLMQGAIPSIHTIQEILSVKDTDKMNRKGFVG SKDWIGSFEIMIVLQHYIPGLDCTIRRMESGAELETNPEIQALLAEHFRGKRSCPVMIGG SSYAHTILGVDMNLATTEARYLIADPHYASNETSTKTVVSKGYVGWKEARNFFEANSWYN LCIPQVATFDPR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/339 Sequence name : 339 Sequence length : 492 VALUES OF COMPUTED PARAMETERS Coef20 : 3.886 CoefTot : 0.148 ChDiff : -10 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.335 1.365 0.197 0.583 MesoH : -0.470 0.348 -0.367 0.233 MuHd_075 : 21.927 11.651 6.301 2.698 MuHd_095 : 8.627 15.323 3.553 3.111 MuHd_100 : 17.572 21.998 5.682 5.206 MuHd_105 : 23.018 24.265 6.840 6.348 Hmax_075 : 13.300 13.067 2.687 4.865 Hmax_095 : 8.700 17.200 0.948 5.340 Hmax_100 : 10.000 17.900 1.296 5.800 Hmax_105 : 9.625 15.312 1.152 5.495 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9206 0.0794 DFMC : 0.9252 0.0748
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 492 Tbg972.4.500 MATVANEFATLDEGVLPILVVRKNGKTIAVVRDNSLQGTFLPFYLPTCETLHVSRTEELQEARESGVLNVAAVEWPVVAK 80 LRMALGILKEERYWLLFSRGGVSNEGLTSHMFKGDEEGVHDAVSWLSGFQLSGPCDILLASEPSVTNGPANGDVGRLRLK 160 KEDEDVNERVVFGESATDVARYIGDLLRAHLFQNVTAPTAVFWPPQLVHPVNIHYGMANQRVLEHDALLLPILSLFRVEK 240 RLKNWDAVKGLQVSAGCDMPRTGQAWEKHLVRNIHKSLKEYIPVSGGEVYITSGSYDYYHYLIDGFKDSGWGCAYRSLQT 320 ILSWFQYEGLMQGAIPSIHTIQEILSVKDTDKMNRKGFVGSKDWIGSFEIMIVLQHYIPGLDCTIRRMESGAELETNPEI 400 QALLAEHFRGKRSCPVMIGGSSYAHTILGVDMNLATTEARYLIADPHYASNETSTKTVVSKGYVGWKEARNFFEANSWYN 480 LCIPQVATFDPR 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...........P.................................................................... 480 ............ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.4.500 22 LPILVVR|KN 0.104 . Tbg972.4.500 23 PILVVRK|NG 0.072 . Tbg972.4.500 26 VVRKNGK|TI 0.073 . Tbg972.4.500 32 KTIAVVR|DN 0.127 . Tbg972.4.500 55 ETLHVSR|TE 0.081 . Tbg972.4.500 63 EELQEAR|ES 0.087 . Tbg972.4.500 80 EWPVVAK|LR 0.063 . Tbg972.4.500 82 PVVAKLR|MA 0.141 . Tbg972.4.500 89 MALGILK|EE 0.054 . Tbg972.4.500 92 GILKEER|YW 0.075 . Tbg972.4.500 99 YWLLFSR|GG 0.078 . Tbg972.4.500 113 LTSHMFK|GD 0.110 . Tbg972.4.500 156 ANGDVGR|LR 0.091 . Tbg972.4.500 158 GDVGRLR|LK 0.084 . Tbg972.4.500 160 VGRLRLK|KE 0.057 . Tbg972.4.500 161 GRLRLKK|ED 0.371 . Tbg972.4.500 169 DEDVNER|VV 0.085 . Tbg972.4.500 181 SATDVAR|YI 0.170 . Tbg972.4.500 188 YIGDLLR|AH 0.072 . Tbg972.4.500 221 YGMANQR|VL 0.079 . Tbg972.4.500 237 PILSLFR|VE 0.060 . Tbg972.4.500 240 SLFRVEK|RL 0.109 . Tbg972.4.500 241 LFRVEKR|LK 0.119 . Tbg972.4.500 243 RVEKRLK|NW 0.067 . Tbg972.4.500 249 KNWDAVK|GL 0.067 . Tbg972.4.500 261 AGCDMPR|TG 0.095 . Tbg972.4.500 268 TGQAWEK|HL 0.072 . Tbg972.4.500 272 WEKHLVR|NI 0.116 . Tbg972.4.500 276 LVRNIHK|SL 0.092 . Tbg972.4.500 279 NIHKSLK|EY 0.072 . Tbg972.4.500 307 YLIDGFK|DS 0.073 . Tbg972.4.500 316 GWGCAYR|SL 0.200 . Tbg972.4.500 348 QEILSVK|DT 0.078 . Tbg972.4.500 352 SVKDTDK|MN 0.074 . Tbg972.4.500 355 DTDKMNR|KG 0.077 . Tbg972.4.500 356 TDKMNRK|GF 0.101 . Tbg972.4.500 362 KGFVGSK|DW 0.076 . Tbg972.4.500 386 GLDCTIR|RM 0.084 . Tbg972.4.500 387 LDCTIRR|ME 0.171 . Tbg972.4.500 409 LLAEHFR|GK 0.105 . Tbg972.4.500 411 AEHFRGK|RS 0.070 . Tbg972.4.500 412 EHFRGKR|SC 0.528 *ProP* Tbg972.4.500 440 LATTEAR|YL 0.104 . Tbg972.4.500 456 SNETSTK|TV 0.073 . Tbg972.4.500 461 TKTVVSK|GY 0.072 . Tbg972.4.500 467 KGYVGWK|EA 0.070 . Tbg972.4.500 470 VGWKEAR|NF 0.103 . Tbg972.4.500 492 VATFDPR|-- 0.087 . ____________________________^_________________

  • Fasta :-

    >Tbg972.4.500 ATGGCGACGGTGGCTAATGAATTCGCCACATTGGATGAAGGGGTGCTGCCTATTCTTGTT GTACGGAAAAATGGCAAAACTATTGCGGTTGTACGCGACAACTCCCTTCAAGGCACCTTT CTTCCATTTTATCTCCCCACATGCGAAACCCTACATGTAAGTCGAACCGAAGAATTACAG GAAGCACGCGAAAGCGGTGTGCTGAATGTCGCGGCGGTCGAGTGGCCCGTCGTGGCAAAG CTTCGCATGGCACTCGGTATTTTGAAGGAGGAAAGATATTGGCTACTTTTTAGCCGAGGA GGGGTAAGTAACGAGGGGCTAACCAGTCACATGTTCAAGGGAGATGAGGAGGGTGTGCAT GACGCGGTTTCGTGGCTGTCGGGGTTTCAACTTAGCGGACCATGCGACATTTTACTAGCG AGTGAGCCAAGTGTCACAAACGGACCAGCAAATGGAGATGTCGGGCGTCTGCGTTTGAAG AAGGAGGATGAGGATGTGAATGAACGTGTTGTGTTTGGCGAATCGGCCACTGATGTGGCA CGTTACATTGGTGATCTTCTCCGTGCTCATCTCTTCCAAAATGTGACGGCGCCGACGGCG GTATTTTGGCCGCCACAGCTGGTGCATCCGGTAAACATTCACTACGGCATGGCCAACCAG CGTGTCTTAGAGCACGATGCGCTTTTGTTACCTATACTCTCCCTATTCCGAGTGGAGAAG CGACTGAAAAACTGGGACGCCGTGAAGGGGCTCCAGGTGTCTGCAGGGTGTGACATGCCT CGGACTGGCCAGGCGTGGGAGAAACATCTGGTGCGCAACATTCATAAGTCTCTCAAGGAA TACATTCCCGTATCTGGTGGAGAGGTTTACATAACCAGCGGGTCTTACGATTATTATCAT TATCTTATTGATGGCTTTAAGGACTCTGGTTGGGGTTGCGCGTACCGGAGCCTTCAGACG ATTTTGTCGTGGTTCCAATACGAGGGACTTATGCAAGGTGCCATCCCAAGTATTCACACT ATTCAAGAAATCCTTTCCGTGAAAGACACCGATAAGATGAATCGTAAAGGGTTTGTGGGG TCGAAAGATTGGATTGGCTCCTTCGAGATAATGATTGTGTTGCAGCACTACATTCCGGGT TTAGACTGCACCATAAGGCGCATGGAAAGCGGCGCTGAACTGGAAACGAACCCGGAAATA CAGGCGCTTCTTGCGGAGCACTTTAGGGGGAAAAGATCATGCCCCGTCATGATCGGCGGC AGCAGCTACGCGCACACCATTCTTGGCGTTGATATGAACCTTGCTACGACGGAGGCGCGA TATCTGATTGCGGATCCTCACTATGCTAGCAATGAAACATCAACGAAAACTGTTGTGAGC AAGGGTTACGTGGGGTGGAAGGAGGCCAGAAACTTCTTTGAGGCGAATAGTTGGTACAAC CTATGCATACCACAGGTAGCCACCTTCGATCCCCGCTGA
  • Download Fasta

  • Fasta :-

    MATVANEFATLDEGVLPILVVRKNGKTIAVVRDNSLQGTFLPFYLPTCETLHVSRTEELQ EARESGVLNVAAVEWPVVAKLRMALGILKEERYWLLFSRGGVSNEGLTSHMFKGDEEGVH DAVSWLSGFQLSGPCDILLASEPSVTNGPANGDVGRLRLKKEDEDVNERVVFGESATDVA RYIGDLLRAHLFQNVTAPTAVFWPPQLVHPVNIHYGMANQRVLEHDALLLPILSLFRVEK RLKNWDAVKGLQVSAGCDMPRTGQAWEKHLVRNIHKSLKEYIPVSGGEVYITSGSYDYYH YLIDGFKDSGWGCAYRSLQTILSWFQYEGLMQGAIPSIHTIQEILSVKDTDKMNRKGFVG SKDWIGSFEIMIVLQHYIPGLDCTIRRMESGAELETNPEIQALLAEHFRGKRSCPVMIGG SSYAHTILGVDMNLATTEARYLIADPHYASNETSTKTVVSKGYVGWKEARNFFEANSWYN LCIPQVATFDPR

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.4.500390 SRRMESGAEL0.995unspTbg972.4.500390 SRRMESGAEL0.995unspTbg972.4.500390 SRRMESGAEL0.995unspTbg972.4.500277 SNIHKSLKEY0.995unspTbg972.4.500346 SQEILSVKDT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India