Tbg972.5.3620 | eukaryotic translation initiation factor 3 subunit b

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      GO:0005852      

  • Curated_GO_Components:  cytoplasm      eukaryotic translation initiation factor 3 complex      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.5.3620OTHER0.9994320.0002490.000318
No Results

  • Fasta :-

    >Tbg972.5.3620 MEDDGLMSNIIIVNGLPARVTPEKRAMFLRHMTKKVSDVLGHDKFTIHPVLDEETEHVAG AFLTFTTVNSAEDALARLNRFPFTKTDILSTYRWCALKAASEPPEEYKPPEMEQDTDADF AHTMAEDSMARPQFFIKQGESFDVEWYWFNYTTLKAELYRKPRPLKTDSVGQWTEMDRRQ KRLDPGLVYGALTSVRPMPAWSTFGRIMVSQHMGGLKLWGGRKMHMLFEVTELDIKAFYI SPQEKYLVVKSPKEVSVWNIRLSKKIRVLGGLDLADSDKWPIARYNAEDELVAISHACLE PMGQGKLFLYRAETMRALQVESNSETPVHSLVIPGLKVAEWNPAVGNQMAILVQGGSSEG WKIIIQNLVVKDDVVRAEVIEQRNFLQAQRLDLLWHPQGTHLVVKVTKTNSTEYSIFSVG VKSAAAYQLKVENGLTPGRFAWKPSGPHFAVICEDRARTGKLGDTSEIRIYCIKKQLKLI GHYPTSATHLFWAPRGSRLVATNYDKSTLHFYGINDSGACVQLERVTSPVTDTAWDPTGR FYAAWVSALRNSGDNQFRIFDLNGRELMQKSVRQLSHFAWRPLAPPVLTAAEIKHIQDNL REYSQRYQNEVKEQKEREEAELQSKEREKEEQYKKRMKGIARHHADKGLARTREELIASS RWSRLWARRMKSLPPEEMILHEVVTEQRIERRRPLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/585 Sequence name : 585 Sequence length : 696 VALUES OF COMPUTED PARAMETERS Coef20 : 3.613 CoefTot : 0.000 ChDiff : 10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.671 1.047 -0.062 0.462 MesoH : -0.492 0.235 -0.414 0.208 MuHd_075 : 26.621 19.971 7.005 5.964 MuHd_095 : 9.683 2.976 2.863 0.906 MuHd_100 : 10.382 3.370 2.781 1.220 MuHd_105 : 6.727 3.842 1.601 0.896 Hmax_075 : 16.800 16.217 3.524 6.417 Hmax_095 : 7.437 10.000 0.439 3.940 Hmax_100 : 7.100 8.900 0.083 3.660 Hmax_105 : 2.917 13.067 0.215 4.573 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9747 0.0253 DFMC : 0.9662 0.0338
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 696 Tbg972.5.3620 MEDDGLMSNIIIVNGLPARVTPEKRAMFLRHMTKKVSDVLGHDKFTIHPVLDEETEHVAGAFLTFTTVNSAEDALARLNR 80 FPFTKTDILSTYRWCALKAASEPPEEYKPPEMEQDTDADFAHTMAEDSMARPQFFIKQGESFDVEWYWFNYTTLKAELYR 160 KPRPLKTDSVGQWTEMDRRQKRLDPGLVYGALTSVRPMPAWSTFGRIMVSQHMGGLKLWGGRKMHMLFEVTELDIKAFYI 240 SPQEKYLVVKSPKEVSVWNIRLSKKIRVLGGLDLADSDKWPIARYNAEDELVAISHACLEPMGQGKLFLYRAETMRALQV 320 ESNSETPVHSLVIPGLKVAEWNPAVGNQMAILVQGGSSEGWKIIIQNLVVKDDVVRAEVIEQRNFLQAQRLDLLWHPQGT 400 HLVVKVTKTNSTEYSIFSVGVKSAAAYQLKVENGLTPGRFAWKPSGPHFAVICEDRARTGKLGDTSEIRIYCIKKQLKLI 480 GHYPTSATHLFWAPRGSRLVATNYDKSTLHFYGINDSGACVQLERVTSPVTDTAWDPTGRFYAAWVSALRNSGDNQFRIF 560 DLNGRELMQKSVRQLSHFAWRPLAPPVLTAAEIKHIQDNLREYSQRYQNEVKEQKEREEAELQSKEREKEEQYKKRMKGI 640 ARHHADKGLARTREELIASSRWSRLWARRMKSLPPEEMILHEVVTEQRIERRRPLN 720 ................................................................................ 80 ................................................................................ 160 .....................P.......................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.5.3620 19 VNGLPAR|VT 0.096 . Tbg972.5.3620 24 ARVTPEK|RA 0.075 . Tbg972.5.3620 25 RVTPEKR|AM 0.131 . Tbg972.5.3620 30 KRAMFLR|HM 0.165 . Tbg972.5.3620 34 FLRHMTK|KV 0.113 . Tbg972.5.3620 35 LRHMTKK|VS 0.168 . Tbg972.5.3620 44 DVLGHDK|FT 0.063 . Tbg972.5.3620 77 AEDALAR|LN 0.072 . Tbg972.5.3620 80 ALARLNR|FP 0.347 . Tbg972.5.3620 85 NRFPFTK|TD 0.063 . Tbg972.5.3620 93 DILSTYR|WC 0.066 . Tbg972.5.3620 98 YRWCALK|AA 0.071 . Tbg972.5.3620 108 EPPEEYK|PP 0.071 . Tbg972.5.3620 131 AEDSMAR|PQ 0.079 . Tbg972.5.3620 137 RPQFFIK|QG 0.069 . Tbg972.5.3620 155 FNYTTLK|AE 0.053 . Tbg972.5.3620 160 LKAELYR|KP 0.085 . Tbg972.5.3620 161 KAELYRK|PR 0.067 . Tbg972.5.3620 163 ELYRKPR|PL 0.220 . Tbg972.5.3620 166 RKPRPLK|TD 0.179 . Tbg972.5.3620 178 QWTEMDR|RQ 0.068 . Tbg972.5.3620 179 WTEMDRR|QK 0.090 . Tbg972.5.3620 181 EMDRRQK|RL 0.154 . Tbg972.5.3620 182 MDRRQKR|LD 0.501 *ProP* Tbg972.5.3620 196 GALTSVR|PM 0.071 . Tbg972.5.3620 206 AWSTFGR|IM 0.119 . Tbg972.5.3620 217 QHMGGLK|LW 0.070 . Tbg972.5.3620 222 LKLWGGR|KM 0.078 . Tbg972.5.3620 223 KLWGGRK|MH 0.077 . Tbg972.5.3620 236 VTELDIK|AF 0.055 . Tbg972.5.3620 245 YISPQEK|YL 0.073 . Tbg972.5.3620 250 EKYLVVK|SP 0.076 . Tbg972.5.3620 253 LVVKSPK|EV 0.081 . Tbg972.5.3620 261 VSVWNIR|LS 0.077 . Tbg972.5.3620 264 WNIRLSK|KI 0.109 . Tbg972.5.3620 265 NIRLSKK|IR 0.088 . Tbg972.5.3620 267 RLSKKIR|VL 0.140 . Tbg972.5.3620 279 DLADSDK|WP 0.064 . Tbg972.5.3620 284 DKWPIAR|YN 0.098 . Tbg972.5.3620 306 EPMGQGK|LF 0.061 . Tbg972.5.3620 311 GKLFLYR|AE 0.079 . Tbg972.5.3620 316 YRAETMR|AL 0.112 . Tbg972.5.3620 337 LVIPGLK|VA 0.061 . Tbg972.5.3620 362 GSSEGWK|II 0.087 . Tbg972.5.3620 371 IQNLVVK|DD 0.066 . Tbg972.5.3620 376 VKDDVVR|AE 0.079 . Tbg972.5.3620 383 AEVIEQR|NF 0.083 . Tbg972.5.3620 390 NFLQAQR|LD 0.062 . Tbg972.5.3620 405 GTHLVVK|VT 0.065 . Tbg972.5.3620 408 LVVKVTK|TN 0.075 . Tbg972.5.3620 422 IFSVGVK|SA 0.100 . Tbg972.5.3620 430 AAAYQLK|VE 0.061 . Tbg972.5.3620 439 NGLTPGR|FA 0.082 . Tbg972.5.3620 443 PGRFAWK|PS 0.081 . Tbg972.5.3620 456 AVICEDR|AR 0.096 . Tbg972.5.3620 458 ICEDRAR|TG 0.081 . Tbg972.5.3620 461 DRARTGK|LG 0.214 . Tbg972.5.3620 469 GDTSEIR|IY 0.077 . Tbg972.5.3620 474 IRIYCIK|KQ 0.064 . Tbg972.5.3620 475 RIYCIKK|QL 0.111 . Tbg972.5.3620 478 CIKKQLK|LI 0.075 . Tbg972.5.3620 495 HLFWAPR|GS 0.093 . Tbg972.5.3620 498 WAPRGSR|LV 0.215 . Tbg972.5.3620 506 VATNYDK|ST 0.065 . Tbg972.5.3620 525 ACVQLER|VT 0.106 . Tbg972.5.3620 540 AWDPTGR|FY 0.093 . Tbg972.5.3620 550 AWVSALR|NS 0.088 . Tbg972.5.3620 558 SGDNQFR|IF 0.092 . Tbg972.5.3620 565 IFDLNGR|EL 0.073 . Tbg972.5.3620 570 GRELMQK|SV 0.110 . Tbg972.5.3620 573 LMQKSVR|QL 0.104 . Tbg972.5.3620 581 LSHFAWR|PL 0.103 . Tbg972.5.3620 594 LTAAEIK|HI 0.079 . Tbg972.5.3620 601 HIQDNLR|EY 0.097 . Tbg972.5.3620 606 LREYSQR|YQ 0.126 . Tbg972.5.3620 612 RYQNEVK|EQ 0.062 . Tbg972.5.3620 615 NEVKEQK|ER 0.069 . Tbg972.5.3620 617 VKEQKER|EE 0.077 . Tbg972.5.3620 625 EAELQSK|ER 0.063 . Tbg972.5.3620 627 ELQSKER|EK 0.102 . Tbg972.5.3620 629 QSKEREK|EE 0.065 . Tbg972.5.3620 634 EKEEQYK|KR 0.070 . Tbg972.5.3620 635 KEEQYKK|RM 0.098 . Tbg972.5.3620 636 EEQYKKR|MK 0.406 . Tbg972.5.3620 638 QYKKRMK|GI 0.071 . Tbg972.5.3620 642 RMKGIAR|HH 0.104 . Tbg972.5.3620 647 ARHHADK|GL 0.078 . Tbg972.5.3620 651 ADKGLAR|TR 0.098 . Tbg972.5.3620 653 KGLARTR|EE 0.068 . Tbg972.5.3620 661 ELIASSR|WS 0.075 . Tbg972.5.3620 664 ASSRWSR|LW 0.269 . Tbg972.5.3620 668 WSRLWAR|RM 0.084 . Tbg972.5.3620 669 SRLWARR|MK 0.142 . Tbg972.5.3620 671 LWARRMK|SL 0.338 . Tbg972.5.3620 688 EVVTEQR|IE 0.065 . Tbg972.5.3620 691 TEQRIER|RR 0.133 . Tbg972.5.3620 692 EQRIERR|RP 0.101 . Tbg972.5.3620 693 QRIERRR|PL 0.153 . ____________________________^_________________

  • Fasta :-

    >Tbg972.5.3620 ATGGAGGACGATGGCTTGATGTCGAACATCATCATTGTAAATGGCCTCCCGGCGAGAGTT ACACCGGAGAAGCGTGCCATGTTCCTGCGTCACATGACGAAGAAAGTTTCCGACGTCCTT GGTCACGATAAATTCACAATCCACCCCGTCCTTGATGAGGAAACGGAGCACGTTGCTGGA GCCTTTCTCACTTTCACTACGGTGAATAGCGCGGAGGATGCTCTCGCCCGCCTAAATCGC TTTCCCTTTACAAAGACCGATATTCTCTCGACATATAGGTGGTGCGCGCTTAAGGCAGCG AGTGAACCGCCGGAGGAGTACAAACCGCCAGAGATGGAGCAGGACACCGATGCGGATTTT GCTCACACAATGGCGGAAGACTCCATGGCGCGCCCGCAGTTCTTCATTAAGCAGGGCGAG TCCTTCGATGTAGAGTGGTATTGGTTTAACTACACTACACTAAAGGCTGAATTATACCGC AAGCCCCGCCCCCTCAAGACAGATTCTGTTGGACAGTGGACGGAGATGGACCGTCGACAG AAGAGACTTGACCCCGGTCTTGTGTACGGCGCCTTGACGTCTGTTCGGCCGATGCCTGCA TGGTCGACATTCGGTCGGATTATGGTTTCGCAGCATATGGGTGGCCTGAAACTGTGGGGT GGGCGCAAGATGCATATGTTATTCGAGGTTACTGAGCTTGATATCAAGGCCTTTTACATT TCTCCACAGGAAAAATACCTTGTAGTAAAGTCACCAAAGGAGGTGAGCGTATGGAATATC CGTTTATCAAAAAAGATTCGCGTACTGGGCGGTCTCGATCTTGCCGACTCAGATAAGTGG CCCATTGCCCGCTACAATGCGGAGGATGAGCTTGTCGCTATCTCGCATGCCTGTTTGGAG CCAATGGGACAAGGTAAATTATTTTTGTATCGAGCTGAGACAATGCGAGCTCTCCAGGTG GAGTCCAACAGTGAAACACCGGTGCATTCTTTGGTCATTCCCGGACTGAAGGTGGCCGAA TGGAATCCGGCAGTCGGCAATCAGATGGCCATTCTAGTCCAAGGAGGCTCCAGTGAGGGA TGGAAGATCATCATTCAAAACCTCGTTGTGAAGGATGACGTTGTGCGTGCGGAGGTAATT GAGCAGCGAAACTTCTTGCAAGCACAGCGACTTGACCTCCTATGGCACCCGCAAGGCACC CATTTGGTTGTCAAAGTAACGAAAACGAATTCAACAGAGTATTCGATTTTTTCTGTTGGT GTGAAAAGTGCTGCTGCTTACCAACTGAAGGTGGAGAACGGCTTAACTCCTGGACGTTTT GCTTGGAAACCAAGCGGCCCTCACTTCGCTGTTATATGCGAGGACCGTGCAAGGACGGGA AAGTTGGGTGACACCTCGGAGATTCGAATTTACTGCATAAAGAAACAGCTGAAACTTATT GGTCATTATCCAACATCCGCAACCCACCTCTTCTGGGCACCGCGTGGTTCTCGTTTGGTT GCAACGAACTACGACAAATCAACGTTGCACTTCTACGGTATTAATGATAGTGGCGCTTGC GTCCAACTCGAGCGAGTGACTTCACCCGTCACAGATACCGCTTGGGACCCAACTGGGCGA TTCTACGCGGCGTGGGTGTCTGCGTTGCGGAACTCTGGCGATAACCAGTTCCGTATTTTT GATCTCAATGGTAGGGAACTCATGCAGAAGTCAGTGCGCCAACTTTCGCACTTTGCATGG CGGCCGCTCGCCCCCCCGGTGTTAACGGCAGCAGAGATCAAACACATACAAGATAATCTT CGAGAATACAGTCAACGATATCAAAACGAGGTTAAGGAACAAAAGGAACGTGAAGAGGCG GAACTTCAGAGTAAAGAGCGCGAAAAGGAGGAACAATACAAGAAGCGCATGAAGGGGATT GCACGGCATCATGCCGATAAGGGACTAGCCCGTACACGTGAAGAGTTGATTGCCTCTTCG CGGTGGAGCCGTTTATGGGCGCGCCGCATGAAGAGCCTTCCACCAGAGGAGATGATTCTT CATGAGGTTGTCACGGAGCAGCGCATCGAGCGCCGGCGCCCACTAAATTAG
  • Download Fasta

  • Fasta :-

    MEDDGLMSNIIIVNGLPARVTPEKRAMFLRHMTKKVSDVLGHDKFTIHPVLDEETEHVAG AFLTFTTVNSAEDALARLNRFPFTKTDILSTYRWCALKAASEPPEEYKPPEMEQDTDADF AHTMAEDSMARPQFFIKQGESFDVEWYWFNYTTLKAELYRKPRPLKTDSVGQWTEMDRRQ KRLDPGLVYGALTSVRPMPAWSTFGRIMVSQHMGGLKLWGGRKMHMLFEVTELDIKAFYI SPQEKYLVVKSPKEVSVWNIRLSKKIRVLGGLDLADSDKWPIARYNAEDELVAISHACLE PMGQGKLFLYRAETMRALQVESNSETPVHSLVIPGLKVAEWNPAVGNQMAILVQGGSSEG WKIIIQNLVVKDDVVRAEVIEQRNFLQAQRLDLLWHPQGTHLVVKVTKTNSTEYSIFSVG VKSAAAYQLKVENGLTPGRFAWKPSGPHFAVICEDRARTGKLGDTSEIRIYCIKKQLKLI GHYPTSATHLFWAPRGSRLVATNYDKSTLHFYGINDSGACVQLERVTSPVTDTAWDPTGR FYAAWVSALRNSGDNQFRIFDLNGRELMQKSVRQLSHFAWRPLAPPVLTAAEIKHIQDNL REYSQRYQNEVKEQKEREEAELQSKEREKEEQYKKRMKGIARHHADKGLARTREELIASS RWSRLWARRMKSLPPEEMILHEVVTEQRIERRRPLN

  • title: WD40 repeat
  • coordinates: A441-I480
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.5.362070 STTVNSAEDA0.995unspTbg972.5.3620251 SLVVKSPKEV0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India