Tbg972.5.4800 | ABC1 family, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >Tbg972.5.4800 MAWRTIRRFTRRSPRRCVSLTVGSAAVATSLLMVPPLEYVPAPLLPSRVLLDGVGRVFRC AYVSGCIFVDYAWSLHGVEDQERWNEVHLRSASRLVKLAETNGGLYVKVGQVFANLNHVL PPQYCSVMAVLQDNVAKRPFTEVMAVLEHDLDRPVDEIFEVIDPKPLAAASLAQVHRGKL RKEGIDVAVKVQYIDIAQRFKGDMRTIQLMLNIAGFFFRGYDLSGIVSKLNKTVGNELDF ALEADNCERGARDLKAGGFGDRVVTPEVLRLYSTRRVLTTRLIKDAARITDISRLMELGI EPKMVASWLYDALSYQLFVSGFVHGDPHAGNILVHRLPNGKPQVVLLDFGLCTELTDEMR RDLATIWTSSVTHDTATLKRISEKFGIEDYALLASCFLQHPYELFTAEGRVMTKMTKGLM QDQMRNQMDKINEIVYELPKEYSLVLRNIMAAKAINKVLNDPVNRPLRMLRYSARICNEG RSQWYVLLLMLRAWWSELISSIQLAYARWRYPELLTALDDSLQLQLSG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/176 Sequence name : 176 Sequence length : 528 VALUES OF COMPUTED PARAMETERS Coef20 : 5.786 CoefTot : 0.541 ChDiff : 8 ZoneTo : 69 KR : 10 DE : 2 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.894 1.841 0.377 0.591 MesoH : -0.168 0.666 -0.151 0.282 MuHd_075 : 42.942 27.160 9.527 9.330 MuHd_095 : 70.125 31.512 16.473 15.428 MuHd_100 : 60.404 26.538 14.222 13.323 MuHd_105 : 44.990 25.129 10.302 9.993 Hmax_075 : 9.500 23.600 4.192 2.490 Hmax_095 : 14.700 11.113 3.186 3.937 Hmax_100 : 15.300 11.400 3.542 4.570 Hmax_105 : 2.625 19.800 4.689 1.811 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0074 0.9926 DFMC : 0.0037 0.9963 This protein is probably imported in mitochondria. f(Ser) = 0.0870 f(Arg) = 0.1449 CMi = 0.31864 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 528 Tbg972.5.4800 MAWRTIRRFTRRSPRRCVSLTVGSAAVATSLLMVPPLEYVPAPLLPSRVLLDGVGRVFRCAYVSGCIFVDYAWSLHGVED 80 QERWNEVHLRSASRLVKLAETNGGLYVKVGQVFANLNHVLPPQYCSVMAVLQDNVAKRPFTEVMAVLEHDLDRPVDEIFE 160 VIDPKPLAAASLAQVHRGKLRKEGIDVAVKVQYIDIAQRFKGDMRTIQLMLNIAGFFFRGYDLSGIVSKLNKTVGNELDF 240 ALEADNCERGARDLKAGGFGDRVVTPEVLRLYSTRRVLTTRLIKDAARITDISRLMELGIEPKMVASWLYDALSYQLFVS 320 GFVHGDPHAGNILVHRLPNGKPQVVLLDFGLCTELTDEMRRDLATIWTSSVTHDTATLKRISEKFGIEDYALLASCFLQH 400 PYELFTAEGRVMTKMTKGLMQDQMRNQMDKINEIVYELPKEYSLVLRNIMAAKAINKVLNDPVNRPLRMLRYSARICNEG 480 RSQWYVLLLMLRAWWSELISSIQLAYARWRYPELLTALDDSLQLQLSG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.5.4800 4 ---MAWR|TI 0.085 . Tbg972.5.4800 7 MAWRTIR|RF 0.144 . Tbg972.5.4800 8 AWRTIRR|FT 0.176 . Tbg972.5.4800 11 TIRRFTR|RS 0.195 . Tbg972.5.4800 12 IRRFTRR|SP 0.273 . Tbg972.5.4800 15 FTRRSPR|RC 0.185 . Tbg972.5.4800 16 TRRSPRR|CV 0.333 . Tbg972.5.4800 48 APLLPSR|VL 0.087 . Tbg972.5.4800 56 LLDGVGR|VF 0.077 . Tbg972.5.4800 59 GVGRVFR|CA 0.436 . Tbg972.5.4800 83 GVEDQER|WN 0.103 . Tbg972.5.4800 90 WNEVHLR|SA 0.195 . Tbg972.5.4800 94 HLRSASR|LV 0.127 . Tbg972.5.4800 97 SASRLVK|LA 0.212 . Tbg972.5.4800 108 NGGLYVK|VG 0.053 . Tbg972.5.4800 137 LQDNVAK|RP 0.070 . Tbg972.5.4800 138 QDNVAKR|PF 0.248 . Tbg972.5.4800 153 LEHDLDR|PV 0.173 . Tbg972.5.4800 165 FEVIDPK|PL 0.063 . Tbg972.5.4800 177 SLAQVHR|GK 0.121 . Tbg972.5.4800 179 AQVHRGK|LR 0.068 . Tbg972.5.4800 181 VHRGKLR|KE 0.097 . Tbg972.5.4800 182 HRGKLRK|EG 0.100 . Tbg972.5.4800 190 GIDVAVK|VQ 0.053 . Tbg972.5.4800 199 YIDIAQR|FK 0.112 . Tbg972.5.4800 201 DIAQRFK|GD 0.063 . Tbg972.5.4800 205 RFKGDMR|TI 0.085 . Tbg972.5.4800 219 IAGFFFR|GY 0.126 . Tbg972.5.4800 229 LSGIVSK|LN 0.073 . Tbg972.5.4800 232 IVSKLNK|TV 0.109 . Tbg972.5.4800 249 EADNCER|GA 0.111 . Tbg972.5.4800 252 NCERGAR|DL 0.468 . Tbg972.5.4800 255 RGARDLK|AG 0.141 . Tbg972.5.4800 262 AGGFGDR|VV 0.098 . Tbg972.5.4800 270 VTPEVLR|LY 0.070 . Tbg972.5.4800 275 LRLYSTR|RV 0.113 . Tbg972.5.4800 276 RLYSTRR|VL 0.116 . Tbg972.5.4800 281 RRVLTTR|LI 0.106 . Tbg972.5.4800 284 LTTRLIK|DA 0.156 . Tbg972.5.4800 288 LIKDAAR|IT 0.118 . Tbg972.5.4800 294 RITDISR|LM 0.074 . Tbg972.5.4800 303 ELGIEPK|MV 0.074 . Tbg972.5.4800 336 GNILVHR|LP 0.089 . Tbg972.5.4800 341 HRLPNGK|PQ 0.060 . Tbg972.5.4800 360 ELTDEMR|RD 0.073 . Tbg972.5.4800 361 LTDEMRR|DL 0.167 . Tbg972.5.4800 379 HDTATLK|RI 0.069 . Tbg972.5.4800 380 DTATLKR|IS 0.180 . Tbg972.5.4800 384 LKRISEK|FG 0.071 . Tbg972.5.4800 410 LFTAEGR|VM 0.076 . Tbg972.5.4800 414 EGRVMTK|MT 0.067 . Tbg972.5.4800 417 VMTKMTK|GL 0.065 . Tbg972.5.4800 425 LMQDQMR|NQ 0.109 . Tbg972.5.4800 430 MRNQMDK|IN 0.084 . Tbg972.5.4800 440 IVYELPK|EY 0.065 . Tbg972.5.4800 447 EYSLVLR|NI 0.111 . Tbg972.5.4800 453 RNIMAAK|AI 0.094 . Tbg972.5.4800 457 AAKAINK|VL 0.058 . Tbg972.5.4800 465 LNDPVNR|PL 0.085 . Tbg972.5.4800 468 PVNRPLR|ML 0.261 . Tbg972.5.4800 471 RPLRMLR|YS 0.247 . Tbg972.5.4800 475 MLRYSAR|IC 0.141 . Tbg972.5.4800 481 RICNEGR|SQ 0.128 . Tbg972.5.4800 492 VLLLMLR|AW 0.078 . Tbg972.5.4800 508 IQLAYAR|WR 0.091 . Tbg972.5.4800 510 LAYARWR|YP 0.085 . ____________________________^_________________

  • Fasta :-

    >Tbg972.5.4800 ATGGCTTGGCGCACAATTCGTCGTTTTACTCGTCGGTCCCCTCGCCGTTGTGTTTCCTTA ACCGTGGGAAGCGCTGCCGTGGCAACATCACTGCTAATGGTTCCCCCATTGGAATATGTT CCAGCTCCGCTGCTGCCTTCCCGCGTGCTGTTGGATGGCGTCGGCCGCGTGTTTCGCTGT GCATATGTTAGCGGGTGCATCTTCGTTGACTACGCGTGGAGTCTTCATGGCGTGGAGGAT CAAGAGAGGTGGAATGAGGTTCACCTTCGCAGCGCCTCCCGTTTAGTGAAACTTGCTGAG ACAAACGGTGGCCTTTATGTGAAGGTAGGGCAGGTTTTCGCTAATCTGAACCATGTCCTA CCCCCGCAGTACTGCTCGGTGATGGCGGTGTTGCAAGACAACGTGGCCAAGCGGCCCTTT ACGGAGGTGATGGCGGTGTTGGAGCACGATCTCGACAGGCCTGTTGACGAAATATTCGAA GTGATTGATCCCAAACCACTTGCCGCCGCTTCCCTTGCGCAAGTGCACCGAGGGAAACTC AGGAAGGAGGGTATCGATGTTGCGGTAAAGGTTCAGTACATAGACATCGCGCAGCGCTTT AAAGGTGATATGCGCACGATCCAACTCATGCTGAATATTGCTGGGTTCTTCTTTCGTGGT TATGATCTCTCAGGAATTGTTTCCAAGCTTAACAAAACCGTTGGGAACGAGTTAGATTTT GCACTAGAAGCGGACAACTGCGAGCGGGGCGCACGAGATCTAAAAGCCGGTGGATTCGGG GACCGTGTTGTTACCCCCGAGGTGCTGCGATTATATTCCACCCGTCGAGTTCTGACGACG CGCCTGATCAAAGACGCTGCGAGGATAACAGATATAAGTAGGCTAATGGAGTTGGGTATT GAACCCAAGATGGTTGCATCATGGCTCTATGACGCACTCTCGTATCAGCTATTTGTTTCG GGCTTCGTACATGGTGATCCGCACGCGGGGAATATTTTAGTGCATCGTCTACCGAACGGG AAACCGCAGGTAGTTCTATTAGATTTCGGCCTCTGTACGGAGTTAACGGATGAAATGCGG AGGGATTTGGCTACTATTTGGACCTCCTCCGTGACACATGACACCGCGACACTGAAAAGG ATATCCGAAAAGTTTGGTATTGAGGACTACGCATTACTTGCCTCTTGTTTCTTACAGCAC CCGTATGAATTGTTTACCGCGGAGGGGCGCGTGATGACAAAAATGACGAAGGGACTTATG CAAGATCAAATGCGAAACCAGATGGACAAGATCAACGAAATAGTTTATGAACTTCCCAAA GAGTACTCGTTAGTCTTGCGGAACATCATGGCAGCAAAGGCGATAAACAAGGTACTGAAT GATCCTGTAAACAGGCCTTTGCGGATGCTTCGTTACTCGGCAAGAATTTGCAATGAGGGT AGATCTCAATGGTACGTGTTACTGCTAATGCTTCGCGCATGGTGGTCAGAACTAATCTCT TCCATTCAACTTGCATATGCAAGGTGGCGCTATCCGGAACTACTAACTGCACTTGATGAC TCCCTGCAGCTGCAACTTAGCGGTTAG
  • Download Fasta

  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L180,K182,E183,G184,I185,V187,A197,R199,D261,T280,R281,L282,I283,D326,G330,N331,L333,L347,D348
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.5.480013 SFTRRSPRRC0.997unspTbg972.5.4800382 SLKRISEKFG0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India