Tbg972.6.220 | cysteine peptidase C (CPC), putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.220SP0.0091780.9903990.000423CS pos: 22-23. VNA-AL. Pr: 0.6997
No Results

  • Fasta :-

    >Tbg972.6.220 MHLMRACITFYIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNIT LREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACG SCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV SDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKI ANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIPLAPNTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/557 Sequence name : 557 Sequence length : 340 VALUES OF COMPUTED PARAMETERS Coef20 : 4.947 CoefTot : 0.948 ChDiff : -7 ZoneTo : 26 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.529 1.906 0.295 0.651 MesoH : -0.188 0.269 -0.136 0.237 MuHd_075 : 18.296 20.535 6.529 6.105 MuHd_095 : 16.384 10.681 5.402 3.376 MuHd_100 : 17.334 9.803 5.864 3.397 MuHd_105 : 18.556 12.111 6.261 4.137 Hmax_075 : 19.200 25.500 6.252 7.360 Hmax_095 : 14.438 21.088 3.767 4.953 Hmax_100 : 15.900 18.500 4.446 5.370 Hmax_105 : 17.617 17.238 4.796 5.521 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9140 0.0860 DFMC : 0.8958 0.1042
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 340 Tbg972.6.220 MHLMRACITFYIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASIL 80 PKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGD 160 GCNGGDPDRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE 240 DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS 320 SECGIEDGGSAGIPLAPNTA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.220 5 --MHLMR|AC 0.095 . Tbg972.6.220 34 DAPVLSK|AF 0.056 . Tbg972.6.220 39 SKAFVDR|VN 0.103 . Tbg972.6.220 42 FVDRVNR|LN 0.172 . Tbg972.6.220 45 RVNRLNR|GI 0.402 . Tbg972.6.220 49 LNRGIWK|AK 0.081 . Tbg972.6.220 51 RGIWKAK|YD 0.093 . Tbg972.6.220 62 MQNITLR|EA 0.093 . Tbg972.6.220 65 ITLREAK|RL 0.125 . Tbg972.6.220 66 TLREAKR|LN 0.202 . Tbg972.6.220 72 RLNGVIK|KN 0.071 . Tbg972.6.220 73 LNGVIKK|NN 0.104 . Tbg972.6.220 82 NASILPK|RR 0.074 . Tbg972.6.220 83 ASILPKR|RF 0.179 . Tbg972.6.220 84 SILPKRR|FT 0.216 . Tbg972.6.220 91 FTEEEAR|AP 0.073 . Tbg972.6.220 134 ASAMSDR|FC 0.154 . Tbg972.6.220 169 NGGDPDR|AW 0.077 . Tbg972.6.220 197 HCSHHSK|SK 0.131 . Tbg972.6.220 199 SHHSKSK|NG 0.069 . Tbg972.6.220 214 FNFDTPK|CN 0.069 . Tbg972.6.220 230 IPVVNYR|SW 0.176 . Tbg972.6.220 245 GEDDYMR|EL 0.080 . Tbg972.6.220 250 MRELFFR|GP 0.120 . Tbg972.6.220 285 LGGHAVR|LV 0.165 . Tbg972.6.220 299 NGVPYWK|IA 0.064 . Tbg972.6.220 317 DGYFLIR|RG 0.071 . Tbg972.6.220 318 GYFLIRR|GS 0.126 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.220 ATGCATCTCATGCGTGCCTGCATCACATTTTATATCGCTTCGACGGCTGTAGTCGCCGTA AACGCCGCCCTCGTTGCTGAAGACGCGCCCGTCCTCTCCAAGGCTTTCGTCGACCGCGTG AACCGCCTCAACCGCGGGATTTGGAAGGCGAAGTACGATGGCGTCATGCAAAACATAACA TTGCGCGAGGCGAAGCGGCTCAACGGTGTTATTAAAAAGAATAATAACGCCAGCATCCTT CCGAAGAGGCGATTCACCGAGGAAGAGGCCCGTGCCCCGCTTCCCAGCAGCTTCGATTCC GCTGAAGCTTGGCCCAACTGCCCCACCATCCCACAAATTGCAGATCAGTCCGCCTGTGGC TCCTGCTGGGCAGTCGCTGCGGCCTCAGCCATGTCCGACCGATTTTGTACGATGGGGGGT GTGCAGGACGTCCATATCTCAGCAGGTGACTTGCTTGCGTGCTGCAGTGATTGTGGCGAT GGCTGTAATGGTGGCGATCCGGATAGGGCGTGGGCGTACTTTAGCTCAACAGGCCTCGTT TCGGACTACTGCCAACCCTACCCATTTCCCCATTGCTCACACCACAGCAAAAGCAAAAAT GGGTACCCTCCCTGTTCTCAGTTCAACTTTGACACGCCCAAGTGCAATTACACGTGCGAT GACCCGACAATCCCCGTTGTCAACTACCGTTCCTGGACGAGCTATGCGCTTCAAGGGGAG GATGACTACATGCGTGAGTTGTTCTTCCGCGGTCCATTTGAGGTGGCGTTTGATGTCTAC GAAGACTTCATCGCCTACAACAGCGGCGTCTACCACCACGTTTCAGGACAATATCTCGGA GGACATGCGGTGAGGCTCGTTGGGTGGGGCACATCAAACGGAGTGCCGTACTGGAAGATT GCCAACAGCTGGAACACCGAGTGGGGAATGGACGGTTACTTTCTCATCCGCCGCGGAAGT AGCGAATGCGGCATCGAGGATGGCGGTTCTGCTGGCATTCCTCTTGCACCCAACACGGCG TAG
  • Download Fasta

  • Fasta :-

    MHLMRACITFYIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNIT LREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACG SCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV SDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKI ANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIPLAPNTA

  • title: active site
  • coordinates: Q116,C122,H282,N302
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.6.220321 SRRGSSECGI0.994unspTbg972.6.220321 SRRGSSECGI0.994unspTbg972.6.220321 SRRGSSECGI0.994unspTbg972.6.22086 TKRRFTEEEA0.99unspTbg972.6.220320 SIRRGSSECG0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India