Tbg972.6.4190 | Protein of unknown function (DUF544), putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:1990380 GO:0004843
Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	Tbg972.6.4190	OTHER	0.999967	0.000026	0.000008

No Results

Fasta :-
>Tbg972.6.4190 MECEFMCDDGVMRSLDITAEATSPFGCVYQQRLRTPRGEGATLGVSDEKLYVLLDEMHQS LIATGFTREEFAAGRLQTIPDAPIEVTPVDSHRVKHGIFCGRHVSIVTQDYNGPCPLLAV ANALALAGRIQLCDGDCRRVEGVHVRHMLLNHATANDKPVAPRFTSAPTRVVDGVEVSTL AGMVKERLEEVRSYLAQENEGEKTMRRLYYGMNISPSFCGVDCFEAESDVMLFALSGLRV VHGWFIPAESPFAALREMSFNEVSVIATKSDSPLSDLAGEFLRSTQSQLTEAGLEMLRQD LCEGEVVVLFWNNHFSTVVKLNGRLLLLLSDETYADKSAVFFQTIEDAYGAATFTDGNGR DADGFLLAVQSLTGNDFSDEDINAAKSEIRNETDAEPSPQVVVDYLKRKRRSQRAAEKGK VD
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/644 Sequence name : 644 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.680 CoefTot : 0.000 ChDiff : -21 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.624 0.109 0.609 MesoH : -0.289 0.450 -0.284 0.264 MuHd_075 : 31.456 18.205 5.953 6.665 MuHd_095 : 29.475 13.045 10.610 3.345 MuHd_100 : 28.653 13.178 10.220 3.711 MuHd_105 : 24.480 11.943 8.006 4.116 Hmax_075 : 19.717 16.567 2.570 6.020 Hmax_095 : 13.650 11.375 4.914 3.211 Hmax_100 : 13.300 11.800 5.262 3.330 Hmax_105 : 4.700 9.000 2.903 2.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9230 0.0770 DFMC : 0.8893 0.1107

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 Tbg972.6.4190 MECEFMCDDGVMRSLDITAEATSPFGCVYQQRLRTPRGEGATLGVSDEKLYVLLDEMHQSLIATGFTREEFAAGRLQTIP 80 DAPIEVTPVDSHRVKHGIFCGRHVSIVTQDYNGPCPLLAVANALALAGRIQLCDGDCRRVEGVHVRHMLLNHATANDKPV 160 APRFTSAPTRVVDGVEVSTLAGMVKERLEEVRSYLAQENEGEKTMRRLYYGMNISPSFCGVDCFEAESDVMLFALSGLRV 240 VHGWFIPAESPFAALREMSFNEVSVIATKSDSPLSDLAGEFLRSTQSQLTEAGLEMLRQDLCEGEVVVLFWNNHFSTVVK 320 LNGRLLLLLSDETYADKSAVFFQTIEDAYGAATFTDGNGRDADGFLLAVQSLTGNDFSDEDINAAKSEIRNETDAEPSPQ 400 VVVDYLKRKRRSQRAAEKGKVD 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..........P..P........ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.4190 13 CDDGVMR|SL 0.125 . Tbg972.6.4190 32 GCVYQQR|LR 0.091 . Tbg972.6.4190 34 VYQQRLR|TP 0.077 . Tbg972.6.4190 37 QRLRTPR|GE 0.397 . Tbg972.6.4190 49 LGVSDEK|LY 0.055 . Tbg972.6.4190 68 IATGFTR|EE 0.093 . Tbg972.6.4190 75 EEFAAGR|LQ 0.065 . Tbg972.6.4190 93 TPVDSHR|VK 0.120 . Tbg972.6.4190 95 VDSHRVK|HG 0.079 . Tbg972.6.4190 102 HGIFCGR|HV 0.168 . Tbg972.6.4190 129 ALALAGR|IQ 0.075 . Tbg972.6.4190 138 LCDGDCR|RV 0.101 . Tbg972.6.4190 139 CDGDCRR|VE 0.132 . Tbg972.6.4190 146 VEGVHVR|HM 0.080 . Tbg972.6.4190 158 HATANDK|PV 0.070 . Tbg972.6.4190 163 DKPVAPR|FT 0.129 . Tbg972.6.4190 170 FTSAPTR|VV 0.226 . Tbg972.6.4190 185 TLAGMVK|ER 0.063 . Tbg972.6.4190 187 AGMVKER|LE 0.076 . Tbg972.6.4190 192 ERLEEVR|SY 0.156 . Tbg972.6.4190 203 QENEGEK|TM 0.057 . Tbg972.6.4190 206 EGEKTMR|RL 0.101 . Tbg972.6.4190 207 GEKTMRR|LY 0.113 . Tbg972.6.4190 239 FALSGLR|VV 0.075 . Tbg972.6.4190 256 SPFAALR|EM 0.100 . Tbg972.6.4190 269 VSVIATK|SD 0.071 . Tbg972.6.4190 283 LAGEFLR|ST 0.147 . Tbg972.6.4190 298 AGLEMLR|QD 0.063 . Tbg972.6.4190 320 HFSTVVK|LN 0.074 . Tbg972.6.4190 324 VVKLNGR|LL 0.061 . Tbg972.6.4190 337 DETYADK|SA 0.068 . Tbg972.6.4190 360 FTDGNGR|DA 0.124 . Tbg972.6.4190 386 EDINAAK|SE 0.083 . Tbg972.6.4190 390 AAKSEIR|NE 0.106 . Tbg972.6.4190 407 VVVDYLK|RK 0.057 . Tbg972.6.4190 408 VVDYLKR|KR 0.114 . Tbg972.6.4190 409 VDYLKRK|RR 0.077 . Tbg972.6.4190 410 DYLKRKR|RS 0.101 . Tbg972.6.4190 411 YLKRKRR|SQ 0.794 *ProP* Tbg972.6.4190 414 RKRRSQR|AA 0.673 *ProP* Tbg972.6.4190 418 SQRAAEK|GK 0.070 . Tbg972.6.4190 420 RAAEKGK|VD 0.069 . ____________________________^_________________

Fasta :-
>Tbg972.6.4190 ATGGAGTGTGAATTCATGTGTGACGACGGTGTGATGCGAAGTTTGGACATAACCGCCGAG GCGACGTCTCCATTTGGGTGCGTCTACCAGCAGCGGTTGCGCACCCCGCGGGGTGAAGGC GCCACTCTGGGCGTCTCAGACGAGAAGCTTTATGTACTTCTCGATGAAATGCATCAGTCT CTTATCGCAACCGGTTTCACGCGGGAGGAGTTTGCGGCCGGTCGTTTGCAGACAATTCCA GATGCGCCAATAGAGGTCACGCCAGTTGATTCGCACCGCGTCAAGCACGGTATTTTTTGT GGTCGACATGTTAGTATCGTTACACAGGACTACAACGGTCCTTGCCCCTTGTTGGCTGTC GCCAATGCTTTGGCGCTTGCAGGGCGGATTCAACTATGCGATGGTGACTGCCGCCGCGTT GAAGGCGTTCACGTGCGTCACATGTTGCTTAACCACGCCACAGCGAACGACAAGCCCGTT GCCCCGCGCTTCACATCCGCACCGACGCGGGTGGTAGATGGTGTGGAGGTTAGCACACTA GCAGGGATGGTGAAAGAGCGTTTGGAGGAGGTAAGGTCTTATTTGGCCCAAGAAAATGAA GGAGAGAAGACAATGCGTCGGTTATATTACGGTATGAACATAAGCCCAAGTTTTTGTGGT GTGGACTGCTTTGAGGCCGAAAGTGATGTGATGCTGTTTGCGCTTTCTGGGTTGCGCGTA GTTCACGGCTGGTTCATCCCAGCGGAAAGCCCGTTCGCTGCGCTGCGGGAAATGTCTTTC AATGAGGTAAGCGTCATTGCGACGAAGAGTGACTCCCCCCTCTCGGATCTTGCTGGGGAA TTCCTTCGCAGCACCCAGTCTCAGTTGACGGAGGCTGGTTTGGAAATGCTCCGACAGGAT TTGTGTGAGGGCGAGGTGGTAGTTCTCTTTTGGAATAACCATTTTTCAACTGTCGTGAAG CTTAACGGCCGCCTCCTCCTGCTTCTTTCCGACGAGACGTATGCGGACAAGTCCGCCGTG TTTTTCCAAACAATTGAAGATGCATACGGCGCCGCCACTTTTACTGACGGCAACGGCAGG GACGCCGATGGGTTTTTACTAGCGGTTCAATCTCTAACAGGAAATGACTTTAGCGACGAA GACATTAATGCAGCGAAATCTGAAATTCGGAACGAAACTGACGCAGAGCCGAGTCCGCAG GTTGTTGTAGATTATTTAAAGAGGAAGCGACGTAGCCAGCGGGCTGCCGAAAAGGGGAAG GTTGATTGA
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Fasta :-

MECEFMCDDGVMRSLDITAEATSPFGCVYQQRLRTPRGEGATLGVSDEKLYVLLDEMHQS LIATGFTREEFAAGRLQTIPDAPIEVTPVDSHRVKHGIFCGRHVSIVTQDYNGPCPLLAV ANALALAGRIQLCDGDCRRVEGVHVRHMLLNHATANDKPVAPRFTSAPTRVVDGVEVSTL AGMVKERLEEVRSYLAQENEGEKTMRRLYYGMNISPSFCGVDCFEAESDVMLFALSGLRV VHGWFIPAESPFAALREMSFNEVSVIATKSDSPLSDLAGEFLRSTQSQLTEAGLEMLRQD LCEGEVVVLFWNNHFSTVVKLNGRLLLLLSDETYADKSAVFFQTIEDAYGAATFTDGNGR DADGFLLAVQSLTGNDFSDEDINAAKSEIRNETDAEPSPQVVVDYLKRKRRSQRAAEKGK VD

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	Tbg972.6.4190	412 S	RKRRSQRAA	0.998	unsp	Tbg972.6.4190	412 S	RKRRSQRAA	0.998	unsp	Tbg972.6.4190	412 S	RKRRSQRAA	0.998	unsp	Tbg972.6.4190	378 S	GNDFSDEDI	0.992	unsp	Tbg972.6.4190	387 S	NAAKSEIRN	0.995	unsp

Tbg972.6.4190 | Protein of unknown function (DUF544), putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:1990380 GO:0004843

Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India