Tbg972.6.730 | cysteine peptidase, Clan CA, family C1, Cathepsin L-like, (fragment)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.6.730SP0.0265650.9723510.001084CS pos: 29-30. ALG-SL. Pr: 0.7726
No Results

  • Fasta :-

    >Tbg972.6.730 MPRTEMVRFVRLPVVLLAMAACLASVALGSLHVEESLEMRFAAFKKKYGKVYKDAKEEAF RFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVN VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVS CDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/177 Sequence name : 177 Sequence length : 220 VALUES OF COMPUTED PARAMETERS Coef20 : 4.836 CoefTot : 0.838 ChDiff : 3 ZoneTo : 33 KR : 3 DE : 1 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.094 2.506 0.470 0.751 MesoH : -0.052 0.196 -0.245 0.272 MuHd_075 : 16.661 10.676 3.748 4.381 MuHd_095 : 23.533 12.536 5.605 5.898 MuHd_100 : 26.341 13.404 5.971 6.317 MuHd_105 : 31.640 14.064 6.764 6.990 Hmax_075 : 8.313 15.600 4.930 5.020 Hmax_095 : 14.263 20.038 4.604 5.250 Hmax_100 : 17.200 21.900 3.456 5.880 Hmax_105 : 17.500 19.300 3.237 6.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9686 0.0314 DFMC : 0.9624 0.0376
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 220 Tbg972.6.730 MPRTEMVRFVRLPVVLLAMAACLASVALGSLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANP 80 YATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIE 160 GQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGN 240 ................................................................................ 80 ................................................................................ 160 ............................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.6.730 3 ----MPR|TE 0.075 . Tbg972.6.730 8 PRTEMVR|FV 0.100 . Tbg972.6.730 11 EMVRFVR|LP 0.153 . Tbg972.6.730 40 EESLEMR|FA 0.117 . Tbg972.6.730 45 MRFAAFK|KK 0.063 . Tbg972.6.730 46 RFAAFKK|KY 0.164 . Tbg972.6.730 47 FAAFKKK|YG 0.116 . Tbg972.6.730 50 FKKKYGK|VY 0.065 . Tbg972.6.730 53 KYGKVYK|DA 0.096 . Tbg972.6.730 56 KVYKDAK|EE 0.058 . Tbg972.6.730 61 AKEEAFR|FR 0.103 . Tbg972.6.730 63 EEAFRFR|AF 0.134 . Tbg972.6.730 73 ENMEQAK|IQ 0.071 . Tbg972.6.730 94 PFSDMTR|EE 0.085 . Tbg972.6.730 98 MTREEFR|AR 0.093 . Tbg972.6.730 100 REEFRAR|YR 0.088 . Tbg972.6.730 102 EFRARYR|NG 0.076 . Tbg972.6.730 113 YFAAAQK|RL 0.062 . Tbg972.6.730 114 FAAAQKR|LR 0.176 . Tbg972.6.730 116 AAQKRLR|KT 0.087 . Tbg972.6.730 117 AQKRLRK|TV 0.239 . Tbg972.6.730 125 VNVTTGR|AP 0.082 . Tbg972.6.730 133 PAAVDWR|EK 0.135 . Tbg972.6.730 135 AVDWREK|GA 0.064 . Tbg972.6.730 142 GAVTPVK|DQ 0.102 . ____________________________^_________________

  • Fasta :-

    >Tbg972.6.730 ATGCCTCGAACAGAAATGGTGCGTTTTGTACGTCTCCCCGTTGTCTTGCTGGCTATGGCA GCGTGCCTTGCGTCTGTCGCACTCGGGTCGCTCCACGTGGAGGAGTCATTGGAGATGCGT TTTGCTGCGTTCAAGAAGAAGTACGGCAAGGTGTACAAGGATGCTAAGGAGGAAGCATTC CGCTTCCGTGCCTTTGAGGAGAATATGGAGCAGGCGAAGATTCAAGCTGCGGCGAACCCA TACGCAACGTTTGGTGTGACACCCTTCTCGGATATGACACGTGAAGAGTTCAGGGCACGC TACCGTAACGGCGCGTCCTACTTTGCAGCTGCGCAGAAGCGGCTACGCAAGACGGTGAAC GTAACCACTGGCCGTGCTCCTGCAGCTGTGGATTGGCGTGAGAAGGGAGCAGTGACCCCA GTGAAGGATCAGGGTCAGTGCGGCTCGTGCTGGGCCTTTTCAACTATCGGCAACATCGAA GGGCAGTGGCAGGTGGCAGGAAATCCTCTCGTATCCCTCTCGGAGCAGATGCTAGTGTCA TGTGATACCATTGATTTCGGCTGTGGTGGTGGGCTGATGGACAATGCCTTCAACTGGATA GTAAATTCAAACGGTGGAAACGTATTCACGGAGGCGAGCTATCCCTATGTTTCTGGGAAT
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  • Fasta :-

    MPRTEMVRFVRLPVVLLAMAACLASVALGSLHVEESLEMRFAAFKKKYGKVYKDAKEEAF RFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVN VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVS CDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGN

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India