Tbg972.7.2860 | proteasome regulatory ATPase subunit 5

_IDPredictionOTHERSPmTPCS_Position
Tbg972.7.2860OTHER0.9999970.0000000.000002
No Results

  • Fasta :-

    >Tbg972.7.2860 MTQDTARATGGAAEGDRGGTSDASAAAQLSPEELENIDSLTNQQLRNRSTQLQREIHQLK NEERTMSSELAGLRREVEESQKRVRDSNKLPYLVASIAEVLDLEADDQDVEELNVGKKKS RHPQKSAIIKTSSRQTVFLPVVGLVDANKLSPQDLVGVNKDTFLVLEELPPEYDSRVKAM EIVEKPKEKYTDVGGLDKQINEMIEAVVLPITEKEKYVRIGIKPPKGVLLYGSPGTGKTM LARACAAATDACFLRLAGPQLVQMYIGEGARILRDAFALAKKRAPTIIFIDELDAIGSRR SDEGSKHGSREVQRTMLELLSLLDGFGSTDDVKVIAATNRIDVLDPALLRSGRIDRKVEF TLPDEEARAHILQIHSRRMALHGDVNFEEISRMTEDMNGAQLKAVCVEAGMLALRNERVY VAHEDFAEGVTAVQARKKSSLNYYA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/842 Sequence name : 842 Sequence length : 445 VALUES OF COMPUTED PARAMETERS Coef20 : 3.345 CoefTot : -0.155 ChDiff : -8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.412 1.100 0.000 0.402 MesoH : -0.610 0.457 -0.291 0.196 MuHd_075 : 22.363 5.965 4.927 4.746 MuHd_095 : 14.482 9.977 3.098 2.387 MuHd_100 : 28.634 13.869 6.405 5.196 MuHd_105 : 39.281 15.320 8.803 6.797 Hmax_075 : 10.733 2.100 0.933 3.092 Hmax_095 : -0.963 -0.963 -1.897 1.040 Hmax_100 : 1.000 0.800 -1.153 2.420 Hmax_105 : 11.200 3.000 0.581 2.210 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9336 0.0664 DFMC : 0.9429 0.0571
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 445 Tbg972.7.2860 MTQDTARATGGAAEGDRGGTSDASAAAQLSPEELENIDSLTNQQLRNRSTQLQREIHQLKNEERTMSSELAGLRREVEES 80 QKRVRDSNKLPYLVASIAEVLDLEADDQDVEELNVGKKKSRHPQKSAIIKTSSRQTVFLPVVGLVDANKLSPQDLVGVNK 160 DTFLVLEELPPEYDSRVKAMEIVEKPKEKYTDVGGLDKQINEMIEAVVLPITEKEKYVRIGIKPPKGVLLYGSPGTGKTM 240 LARACAAATDACFLRLAGPQLVQMYIGEGARILRDAFALAKKRAPTIIFIDELDAIGSRRSDEGSKHGSREVQRTMLELL 320 SLLDGFGSTDDVKVIAATNRIDVLDPALLRSGRIDRKVEFTLPDEEARAHILQIHSRRMALHGDVNFEEISRMTEDMNGA 400 QLKAVCVEAGMLALRNERVYVAHEDFAEGVTAVQARKKSSLNYYA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.7.2860 7 MTQDTAR|AT 0.150 . Tbg972.7.2860 17 GAAEGDR|GG 0.076 . Tbg972.7.2860 46 LTNQQLR|NR 0.106 . Tbg972.7.2860 48 NQQLRNR|ST 0.127 . Tbg972.7.2860 54 RSTQLQR|EI 0.097 . Tbg972.7.2860 60 REIHQLK|NE 0.065 . Tbg972.7.2860 64 QLKNEER|TM 0.107 . Tbg972.7.2860 74 SELAGLR|RE 0.057 . Tbg972.7.2860 75 ELAGLRR|EV 0.306 . Tbg972.7.2860 82 EVEESQK|RV 0.067 . Tbg972.7.2860 83 VEESQKR|VR 0.096 . Tbg972.7.2860 85 ESQKRVR|DS 0.115 . Tbg972.7.2860 89 RVRDSNK|LP 0.061 . Tbg972.7.2860 117 EELNVGK|KK 0.061 . Tbg972.7.2860 118 ELNVGKK|KS 0.092 . Tbg972.7.2860 119 LNVGKKK|SR 0.207 . Tbg972.7.2860 121 VGKKKSR|HP 0.092 . Tbg972.7.2860 125 KSRHPQK|SA 0.146 . Tbg972.7.2860 130 QKSAIIK|TS 0.084 . Tbg972.7.2860 134 IIKTSSR|QT 0.075 . Tbg972.7.2860 149 GLVDANK|LS 0.065 . Tbg972.7.2860 160 DLVGVNK|DT 0.079 . Tbg972.7.2860 176 PPEYDSR|VK 0.081 . Tbg972.7.2860 178 EYDSRVK|AM 0.066 . Tbg972.7.2860 185 AMEIVEK|PK 0.072 . Tbg972.7.2860 187 EIVEKPK|EK 0.068 . Tbg972.7.2860 189 VEKPKEK|YT 0.093 . Tbg972.7.2860 198 DVGGLDK|QI 0.064 . Tbg972.7.2860 214 VLPITEK|EK 0.056 . Tbg972.7.2860 216 PITEKEK|YV 0.083 . Tbg972.7.2860 219 EKEKYVR|IG 0.083 . Tbg972.7.2860 223 YVRIGIK|PP 0.065 . Tbg972.7.2860 226 IGIKPPK|GV 0.081 . Tbg972.7.2860 238 GSPGTGK|TM 0.054 . Tbg972.7.2860 243 GKTMLAR|AC 0.108 . Tbg972.7.2860 255 TDACFLR|LA 0.215 . Tbg972.7.2860 271 YIGEGAR|IL 0.093 . Tbg972.7.2860 274 EGARILR|DA 0.340 . Tbg972.7.2860 281 DAFALAK|KR 0.057 . Tbg972.7.2860 282 AFALAKK|RA 0.094 . Tbg972.7.2860 283 FALAKKR|AP 0.157 . Tbg972.7.2860 299 LDAIGSR|RS 0.083 . Tbg972.7.2860 300 DAIGSRR|SD 0.320 . Tbg972.7.2860 306 RSDEGSK|HG 0.063 . Tbg972.7.2860 310 GSKHGSR|EV 0.102 . Tbg972.7.2860 314 GSREVQR|TM 0.089 . Tbg972.7.2860 333 GSTDDVK|VI 0.058 . Tbg972.7.2860 340 VIAATNR|ID 0.071 . Tbg972.7.2860 350 LDPALLR|SG 0.087 . Tbg972.7.2860 353 ALLRSGR|ID 0.324 . Tbg972.7.2860 356 RSGRIDR|KV 0.472 . Tbg972.7.2860 357 SGRIDRK|VE 0.074 . Tbg972.7.2860 368 LPDEEAR|AH 0.098 . Tbg972.7.2860 377 ILQIHSR|RM 0.085 . Tbg972.7.2860 378 LQIHSRR|MA 0.231 . Tbg972.7.2860 392 NFEEISR|MT 0.090 . Tbg972.7.2860 403 MNGAQLK|AV 0.107 . Tbg972.7.2860 415 AGMLALR|NE 0.074 . Tbg972.7.2860 418 LALRNER|VY 0.157 . Tbg972.7.2860 436 VTAVQAR|KK 0.108 . Tbg972.7.2860 437 TAVQARK|KS 0.073 . Tbg972.7.2860 438 AVQARKK|SS 0.125 . ____________________________^_________________

  • Fasta :-

    >Tbg972.7.2860 ATGACGCAGGACACCGCAAGGGCAACCGGTGGGGCAGCGGAGGGCGACAGGGGGGGCACC AGTGACGCGTCAGCGGCGGCGCAGTTGTCACCGGAGGAATTGGAGAACATCGACTCACTC ACCAACCAGCAGCTTCGCAACCGCTCAACGCAGCTTCAGCGTGAAATACATCAGTTGAAG AATGAGGAGCGAACCATGTCTTCGGAATTGGCGGGGTTGAGAAGGGAGGTGGAAGAGAGC CAGAAACGTGTGCGCGATAGCAACAAGCTTCCATATCTCGTTGCCAGCATCGCAGAGGTA CTGGATCTTGAGGCAGACGACCAGGATGTGGAGGAGTTGAATGTTGGAAAGAAAAAGTCT CGACATCCACAAAAGAGCGCTATAATAAAGACATCAAGCCGGCAGACGGTTTTTCTTCCT GTTGTTGGCCTTGTTGACGCAAACAAACTTTCCCCACAGGACCTCGTTGGTGTAAACAAG GATACCTTCCTTGTGCTCGAAGAACTTCCACCGGAGTACGACAGCCGTGTGAAGGCGATG GAGATTGTAGAGAAACCCAAAGAAAAGTATACCGATGTGGGAGGACTCGATAAACAGATT AATGAAATGATTGAGGCCGTCGTGCTTCCCATTACGGAAAAGGAAAAATATGTGCGTATT GGTATTAAACCACCGAAGGGCGTGCTGCTCTATGGTTCTCCGGGTACTGGAAAGACCATG CTGGCCCGTGCGTGTGCAGCCGCAACTGATGCCTGCTTCTTGCGCCTCGCTGGACCGCAG CTCGTACAAATGTACATTGGGGAGGGAGCGCGTATCCTTCGAGACGCCTTTGCTCTTGCG AAGAAGAGAGCACCAACTATTATTTTTATTGATGAGCTCGATGCTATCGGCTCGCGCCGT TCGGACGAGGGAAGTAAACACGGGTCACGGGAAGTGCAGCGCACGATGTTGGAGCTCCTT TCGCTGCTTGATGGCTTTGGAAGCACCGACGACGTGAAGGTTATTGCGGCAACGAATCGT ATCGATGTCCTTGATCCCGCTTTGTTGCGTAGCGGGCGCATTGACAGAAAGGTGGAGTTC ACTCTTCCGGATGAGGAGGCCCGCGCTCACATTCTTCAAATTCATTCCCGTCGCATGGCA CTTCATGGGGATGTGAATTTTGAAGAGATTTCCCGCATGACGGAGGATATGAATGGGGCA CAACTCAAAGCTGTGTGTGTCGAGGCCGGTATGTTGGCACTCCGCAACGAGCGGGTTTAT GTGGCTCACGAGGACTTCGCGGAGGGGGTTACGGCTGTGCAAGCACGCAAAAAATCTAGC TTGAACTATTACGCATAG
  • Download Fasta

  • Fasta :-

    MTQDTARATGGAAEGDRGGTSDASAAAQLSPEELENIDSLTNQQLRNRSTQLQREIHQLK NEERTMSSELAGLRREVEESQKRVRDSNKLPYLVASIAEVLDLEADDQDVEELNVGKKKS RHPQKSAIIKTSSRQTVFLPVVGLVDANKLSPQDLVGVNKDTFLVLEELPPEYDSRVKAM EIVEKPKEKYTDVGGLDKQINEMIEAVVLPITEKEKYVRIGIKPPKGVLLYGSPGTGKTM LARACAAATDACFLRLAGPQLVQMYIGEGARILRDAFALAKKRAPTIIFIDELDAIGSRR SDEGSKHGSREVQRTMLELLSLLDGFGSTDDVKVIAATNRIDVLDPALLRSGRIDRKVEF TLPDEEARAHILQIHSRRMALHGDVNFEEISRMTEDMNGAQLKAVCVEAGMLALRNERVY VAHEDFAEGVTAVQARKKSSLNYYA

    No Results
  • title: ATP binding site
  • coordinates: S233,P234,G235,T236,G237,K238,T239,M240,D291,N339
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.7.286087 SRVRDSNKLP0.995unspTbg972.7.286087 SRVRDSNKLP0.995unspTbg972.7.286087 SRVRDSNKLP0.995unspTbg972.7.2860190 YPKEKYTDVG0.992unspTbg972.7.2860217 YEKEKYVRIG0.993unspTbg972.7.2860301 SGSRRSDEGS0.998unspTbg972.7.286030 SAAQLSPEEL0.997unspTbg972.7.286080 SEVEESQKRV0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India