Tbg972.8.1230 | metallopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.8.1230OTHER0.6781750.3149250.006900
No Results

  • Fasta :-

    >Tbg972.8.1230 MFNTVTDVTLLFSLFPLFLPCMKRKRLMVLPACVIPMHGALKLAILLMLVWCCSLCLAKS GGRCMFDEIAAKAGRPRVLALRRTKAGMENVKYDRTGSVDPEWQHIRIVVFAEDMKDRSR YCTSAGQERPTFFGETATCSQEDILTAAKRDIAVTKLLPSAVQMHMDRLLVDPITEPLVF PSFDGSVCSEFKVPSSHFSEGVPDADMVMYAAAGPTPEGVAAWATGCITLDDGRAVAGVT NLGPGSISLSETSIRTAAHEIAHALGFDFEAMNDAGMVQRIPGVRGKVDVTLISSPRTLQ KAREHYNCPDAPGMELEDEGGSGTALSHWERRNAKDEIMSGISSPGRYTALTMAAFEDLG YYRGAWGSEEPMGWGNNSGCELLNESCLVNGVTAHPDMFCNETVSKLVCNSERDGLGRCN VIKHENPLPPQYHYFSDPSRGAPSHLLMDYCPSIDAFSNTPCADGETKFMRGSLIGPSSM CLKAEGLRDSQGVIGDVCADVRCDGGEVSIRYLGDDAWHPCPEGSHIKPTTTFTDGVIVC PTYSEVCIKATVVVRPSSASYRSSVPQSLLLTLFAIVYAAC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/421 Sequence name : 421 Sequence length : 581 VALUES OF COMPUTED PARAMETERS Coef20 : 4.349 CoefTot : 0.188 ChDiff : -15 ZoneTo : 66 KR : 7 DE : 1 CleavSite : 28 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.765 2.406 0.464 0.689 MesoH : 0.263 1.111 -0.058 0.338 MuHd_075 : 24.274 15.835 7.371 5.533 MuHd_095 : 26.417 18.026 9.413 5.921 MuHd_100 : 21.917 19.364 6.808 6.309 MuHd_105 : 29.328 20.566 7.425 6.441 Hmax_075 : 16.800 21.350 5.421 4.944 Hmax_095 : 15.400 22.700 7.447 5.049 Hmax_100 : 14.800 22.100 4.799 7.540 Hmax_105 : 23.217 22.100 4.799 7.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8024 0.1976 DFMC : 0.6315 0.3685
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 581 Tbg972.8.1230 MFNTVTDVTLLFSLFPLFLPCMKRKRLMVLPACVIPMHGALKLAILLMLVWCCSLCLAKSGGRCMFDEIAAKAGRPRVLA 80 LRRTKAGMENVKYDRTGSVDPEWQHIRIVVFAEDMKDRSRYCTSAGQERPTFFGETATCSQEDILTAAKRDIAVTKLLPS 160 AVQMHMDRLLVDPITEPLVFPSFDGSVCSEFKVPSSHFSEGVPDADMVMYAAAGPTPEGVAAWATGCITLDDGRAVAGVT 240 NLGPGSISLSETSIRTAAHEIAHALGFDFEAMNDAGMVQRIPGVRGKVDVTLISSPRTLQKAREHYNCPDAPGMELEDEG 320 GSGTALSHWERRNAKDEIMSGISSPGRYTALTMAAFEDLGYYRGAWGSEEPMGWGNNSGCELLNESCLVNGVTAHPDMFC 400 NETVSKLVCNSERDGLGRCNVIKHENPLPPQYHYFSDPSRGAPSHLLMDYCPSIDAFSNTPCADGETKFMRGSLIGPSSM 480 CLKAEGLRDSQGVIGDVCADVRCDGGEVSIRYLGDDAWHPCPEGSHIKPTTTFTDGVIVCPTYSEVCIKATVVVRPSSAS 560 YRSSVPQSLLLTLFAIVYAAC 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.8.1230 23 LFLPCMK|RK 0.052 . Tbg972.8.1230 24 FLPCMKR|KR 0.133 . Tbg972.8.1230 25 LPCMKRK|RL 0.097 . Tbg972.8.1230 26 PCMKRKR|LM 0.098 . Tbg972.8.1230 42 PMHGALK|LA 0.059 . Tbg972.8.1230 59 CSLCLAK|SG 0.086 . Tbg972.8.1230 63 LAKSGGR|CM 0.083 . Tbg972.8.1230 72 FDEIAAK|AG 0.059 . Tbg972.8.1230 75 IAAKAGR|PR 0.077 . Tbg972.8.1230 77 AKAGRPR|VL 0.082 . Tbg972.8.1230 82 PRVLALR|RT 0.093 . Tbg972.8.1230 83 RVLALRR|TK 0.118 . Tbg972.8.1230 85 LALRRTK|AG 0.102 . Tbg972.8.1230 92 AGMENVK|YD 0.065 . Tbg972.8.1230 95 ENVKYDR|TG 0.078 . Tbg972.8.1230 107 PEWQHIR|IV 0.146 . Tbg972.8.1230 116 VFAEDMK|DR 0.064 . Tbg972.8.1230 118 AEDMKDR|SR 0.100 . Tbg972.8.1230 120 DMKDRSR|YC 0.088 . Tbg972.8.1230 129 TSAGQER|PT 0.143 . Tbg972.8.1230 149 DILTAAK|RD 0.057 . Tbg972.8.1230 150 ILTAAKR|DI 0.179 . Tbg972.8.1230 156 RDIAVTK|LL 0.075 . Tbg972.8.1230 168 VQMHMDR|LL 0.081 . Tbg972.8.1230 192 SVCSEFK|VP 0.059 . Tbg972.8.1230 234 ITLDDGR|AV 0.097 . Tbg972.8.1230 255 LSETSIR|TA 0.114 . Tbg972.8.1230 280 DAGMVQR|IP 0.096 . Tbg972.8.1230 285 QRIPGVR|GK 0.093 . Tbg972.8.1230 287 IPGVRGK|VD 0.065 . Tbg972.8.1230 297 TLISSPR|TL 0.109 . Tbg972.8.1230 301 SPRTLQK|AR 0.070 . Tbg972.8.1230 303 RTLQKAR|EH 0.092 . Tbg972.8.1230 331 ALSHWER|RN 0.106 . Tbg972.8.1230 332 LSHWERR|NA 0.312 . Tbg972.8.1230 335 WERRNAK|DE 0.195 . Tbg972.8.1230 347 GISSPGR|YT 0.108 . Tbg972.8.1230 363 EDLGYYR|GA 0.116 . Tbg972.8.1230 406 CNETVSK|LV 0.082 . Tbg972.8.1230 413 LVCNSER|DG 0.084 . Tbg972.8.1230 418 ERDGLGR|CN 0.087 . Tbg972.8.1230 423 GRCNVIK|HE 0.085 . Tbg972.8.1230 440 YFSDPSR|GA 0.118 . Tbg972.8.1230 468 CADGETK|FM 0.068 . Tbg972.8.1230 471 GETKFMR|GS 0.122 . Tbg972.8.1230 483 PSSMCLK|AE 0.069 . Tbg972.8.1230 488 LKAEGLR|DS 0.107 . Tbg972.8.1230 502 DVCADVR|CD 0.085 . Tbg972.8.1230 511 GGEVSIR|YL 0.130 . Tbg972.8.1230 528 PEGSHIK|PT 0.072 . Tbg972.8.1230 549 YSEVCIK|AT 0.076 . Tbg972.8.1230 555 KATVVVR|PS 0.106 . Tbg972.8.1230 562 PSSASYR|SS 0.213 . ____________________________^_________________

  • Fasta :-

    >Tbg972.8.1230 ATGTTCAATACAGTAACTGATGTAACGTTATTGTTCTCTCTCTTCCCCTTGTTCCTCCCA TGTATGAAAAGGAAGCGGTTGATGGTGCTACCGGCGTGTGTAATCCCGATGCATGGCGCA TTGAAACTCGCCATACTGCTGATGTTGGTATGGTGCTGTTCCTTGTGTCTCGCGAAGTCA GGTGGCCGCTGCATGTTCGATGAAATTGCGGCGAAAGCTGGACGTCCACGGGTTTTGGCG CTGCGAAGGACTAAAGCAGGCATGGAGAATGTAAAGTATGACAGGACAGGTTCCGTTGAC CCTGAGTGGCAGCACATCCGTATTGTTGTTTTCGCAGAAGACATGAAGGACCGGTCGCGA TATTGCACGTCTGCAGGGCAGGAACGACCAACGTTTTTCGGAGAAACAGCGACATGTTCA CAAGAAGACATTTTGACAGCCGCTAAGAGAGATATTGCTGTCACTAAGCTTCTTCCTTCA GCTGTCCAGATGCATATGGATAGGTTACTCGTCGACCCTATAACTGAACCCCTTGTCTTT CCTTCATTTGATGGTTCGGTGTGCTCTGAGTTCAAAGTACCGTCAAGTCATTTCTCAGAG GGCGTACCTGACGCTGATATGGTAATGTATGCTGCAGCGGGTCCAACGCCGGAGGGTGTG GCTGCCTGGGCTACGGGTTGCATAACTCTTGACGATGGGCGTGCTGTGGCTGGCGTAACT AACCTTGGCCCCGGTTCCATTAGCCTGTCGGAGACCAGCATTCGCACAGCTGCTCATGAG ATTGCCCACGCCCTTGGGTTCGATTTCGAAGCGATGAACGATGCCGGTATGGTGCAAAGA ATCCCCGGTGTTCGTGGAAAGGTTGATGTGACACTCATTTCGTCACCCAGGACACTGCAG AAGGCCCGCGAACACTACAATTGTCCCGATGCCCCTGGAATGGAACTGGAGGACGAAGGT GGTAGTGGCACCGCATTATCACACTGGGAGCGGCGCAATGCGAAGGATGAGATCATGTCT GGTATTTCTTCACCTGGTCGATACACAGCGCTAACGATGGCGGCGTTTGAGGATCTGGGA TATTACCGTGGTGCCTGGGGGAGCGAAGAACCTATGGGTTGGGGAAACAACTCTGGTTGT GAGCTACTCAACGAGAGCTGTTTGGTGAACGGTGTGACAGCGCACCCGGATATGTTCTGC AACGAAACCGTGAGCAAGCTGGTTTGTAACTCGGAGCGAGATGGTCTTGGAAGGTGTAAT GTAATTAAGCATGAAAATCCACTTCCACCGCAATACCATTACTTTTCCGATCCTTCACGT GGTGCCCCCTCCCATCTCTTGATGGACTACTGCCCGTCCATTGACGCGTTCTCCAACACG CCTTGTGCCGACGGCGAAACGAAATTCATGCGTGGAAGTTTGATAGGACCATCGTCAATG TGTCTGAAGGCCGAGGGACTCCGTGACAGTCAGGGCGTCATTGGCGATGTTTGTGCGGAT GTGCGGTGTGATGGTGGTGAAGTAAGCATTCGTTATCTTGGGGATGATGCATGGCATCCG TGCCCAGAAGGCAGTCACATCAAACCGACTACAACATTCACGGATGGCGTCATTGTTTGC CCGACTTACAGTGAGGTTTGTATCAAAGCAACAGTGGTTGTACGCCCTTCTTCAGCCAGC TACCGTTCTTCAGTGCCACAATCGCTGCTTCTCACCCTATTCGCTATAGTTTATGCTGCC TGTTAA
  • Download Fasta

  • Fasta :-

    MFNTVTDVTLLFSLFPLFLPCMKRKRLMVLPACVIPMHGALKLAILLMLVWCCSLCLAKS GGRCMFDEIAAKAGRPRVLALRRTKAGMENVKYDRTGSVDPEWQHIRIVVFAEDMKDRSR YCTSAGQERPTFFGETATCSQEDILTAAKRDIAVTKLLPSAVQMHMDRLLVDPITEPLVF PSFDGSVCSEFKVPSSHFSEGVPDADMVMYAAAGPTPEGVAAWATGCITLDDGRAVAGVT NLGPGSISLSETSIRTAAHEIAHALGFDFEAMNDAGMVQRIPGVRGKVDVTLISSPRTLQ KAREHYNCPDAPGMELEDEGGSGTALSHWERRNAKDEIMSGISSPGRYTALTMAAFEDLG YYRGAWGSEEPMGWGNNSGCELLNESCLVNGVTAHPDMFCNETVSKLVCNSERDGLGRCN VIKHENPLPPQYHYFSDPSRGAPSHLLMDYCPSIDAFSNTPCADGETKFMRGSLIGPSSM CLKAEGLRDSQGVIGDVCADVRCDGGEVSIRYLGDDAWHPCPEGSHIKPTTTFTDGVIVC PTYSEVCIKATVVVRPSSASYRSSVPQSLLLTLFAIVYAAC

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.8.1230411 SLVCNSERDG0.993unspTbg972.8.1230560 SPSSASYRSS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India