Tbg972.8.2770 | metallo-peptidase, Clan MF, Family M17, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.8.2770OTHER0.5971310.0012560.401612
No Results

  • Fasta :-

    >Tbg972.8.2770 MLKRVIARASLPKSLDVLPLFSFSKKGKGGIEKVAGDSQVKTLVSHPKCVSAHFCNPKDH SETLREDDDGGDVDKHDAVDVPFGFRDAPGNILLDLERRRLFAGIGEKPTVRDYRLAVTA AVREASKLKASALVMRSLPNVLYSVGDLFQPASALPAEDVAEKTVTYAVAAAYRYDRFLS KAKGGLPPPRRGRRNKAVAEGSHEQLNLIIDCGDKTSIASGNIIGHCINDARNLGNLRED EGIPQFYCEWIHQELAPLGIKVQNVLHGEQLEKAGLNLIYNVGKGSKHTPYLVVFEYVGD KRSNKATALVGKGVTFDCGGLNIKPFGSMETMHMDMMGAATVMATMKAIAELQLPVNVVA AVGLAENAIGPSSYHPSCILTSRKGLSVEVLNTDAEGRLVLADTLTYLQKDAKLVKKADT IIDIATLTGAIVVGLGSRRAGLFGNDIALVQQLMASGRSSGEEVWPMPIGDEHQRAIKGN IADLVNVPSVREGGSCTAAAFLSNFVEKDVKWAHLDIAGSGMGTDKPKGFQPAGAPGFGV ELLVDYFRQHVMASSKGVSTGKDGSHGDAEESTQEEGANAEVSKENTKRSKTSAGGKKLT KNAEPKEGKGKEAKPNVKGTKGDRKVGEKGTEGKGKAASPAEKKRVKKAPAAKQGRRAVK GNPKGKKRSGN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/34 Sequence name : 34 Sequence length : 671 VALUES OF COMPUTED PARAMETERS Coef20 : 4.489 CoefTot : -0.449 ChDiff : 20 ZoneTo : 31 KR : 7 DE : 1 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.812 0.296 0.684 MesoH : 0.265 0.633 -0.196 0.334 MuHd_075 : 39.443 22.471 10.647 9.181 MuHd_095 : 35.553 18.647 8.103 6.674 MuHd_100 : 24.627 13.314 5.517 4.787 MuHd_105 : 24.294 15.840 6.916 4.017 Hmax_075 : 17.850 17.700 2.991 5.740 Hmax_095 : 15.200 13.800 2.869 5.060 Hmax_100 : 15.000 15.500 2.771 5.060 Hmax_105 : 13.700 12.200 2.037 3.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0463 0.9537 DFMC : 0.1475 0.8525 This protein is probably imported in mitochondria. f(Ser) = 0.1290 f(Arg) = 0.0645 CMi = 0.80483 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 671 Tbg972.8.2770 MLKRVIARASLPKSLDVLPLFSFSKKGKGGIEKVAGDSQVKTLVSHPKCVSAHFCNPKDHSETLREDDDGGDVDKHDAVD 80 VPFGFRDAPGNILLDLERRRLFAGIGEKPTVRDYRLAVTAAVREASKLKASALVMRSLPNVLYSVGDLFQPASALPAEDV 160 AEKTVTYAVAAAYRYDRFLSKAKGGLPPPRRGRRNKAVAEGSHEQLNLIIDCGDKTSIASGNIIGHCINDARNLGNLRED 240 EGIPQFYCEWIHQELAPLGIKVQNVLHGEQLEKAGLNLIYNVGKGSKHTPYLVVFEYVGDKRSNKATALVGKGVTFDCGG 320 LNIKPFGSMETMHMDMMGAATVMATMKAIAELQLPVNVVAAVGLAENAIGPSSYHPSCILTSRKGLSVEVLNTDAEGRLV 400 LADTLTYLQKDAKLVKKADTIIDIATLTGAIVVGLGSRRAGLFGNDIALVQQLMASGRSSGEEVWPMPIGDEHQRAIKGN 480 IADLVNVPSVREGGSCTAAAFLSNFVEKDVKWAHLDIAGSGMGTDKPKGFQPAGAPGFGVELLVDYFRQHVMASSKGVST 560 GKDGSHGDAEESTQEEGANAEVSKENTKRSKTSAGGKKLTKNAEPKEGKGKEAKPNVKGTKGDRKVGEKGTEGKGKAASP 640 AEKKRVKKAPAAKQGRRAVKGNPKGKKRSGN 720 ................................................................................ 80 ................................................................................ 160 .................................P.............................................. 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.8.2770 3 ----MLK|RV 0.064 . Tbg972.8.2770 4 ---MLKR|VI 0.122 . Tbg972.8.2770 8 LKRVIAR|AS 0.109 . Tbg972.8.2770 13 ARASLPK|SL 0.097 . Tbg972.8.2770 25 PLFSFSK|KG 0.060 . Tbg972.8.2770 26 LFSFSKK|GK 0.239 . Tbg972.8.2770 28 SFSKKGK|GG 0.087 . Tbg972.8.2770 33 GKGGIEK|VA 0.087 . Tbg972.8.2770 41 AGDSQVK|TL 0.056 . Tbg972.8.2770 48 TLVSHPK|CV 0.127 . Tbg972.8.2770 58 AHFCNPK|DH 0.078 . Tbg972.8.2770 65 DHSETLR|ED 0.132 . Tbg972.8.2770 75 DGGDVDK|HD 0.061 . Tbg972.8.2770 86 DVPFGFR|DA 0.085 . Tbg972.8.2770 98 ILLDLER|RR 0.067 . Tbg972.8.2770 99 LLDLERR|RL 0.128 . Tbg972.8.2770 100 LDLERRR|LF 0.106 . Tbg972.8.2770 108 FAGIGEK|PT 0.054 . Tbg972.8.2770 112 GEKPTVR|DY 0.098 . Tbg972.8.2770 115 PTVRDYR|LA 0.266 . Tbg972.8.2770 123 AVTAAVR|EA 0.090 . Tbg972.8.2770 127 AVREASK|LK 0.062 . Tbg972.8.2770 129 REASKLK|AS 0.070 . Tbg972.8.2770 136 ASALVMR|SL 0.178 . Tbg972.8.2770 163 AEDVAEK|TV 0.069 . Tbg972.8.2770 174 AVAAAYR|YD 0.078 . Tbg972.8.2770 177 AAYRYDR|FL 0.391 . Tbg972.8.2770 181 YDRFLSK|AK 0.069 . Tbg972.8.2770 183 RFLSKAK|GG 0.058 . Tbg972.8.2770 190 GGLPPPR|RG 0.075 . Tbg972.8.2770 191 GLPPPRR|GR 0.123 . Tbg972.8.2770 193 PPPRRGR|RN 0.243 . Tbg972.8.2770 194 PPRRGRR|NK 0.521 *ProP* Tbg972.8.2770 196 RRGRRNK|AV 0.427 . Tbg972.8.2770 215 IIDCGDK|TS 0.058 . Tbg972.8.2770 232 HCINDAR|NL 0.111 . Tbg972.8.2770 238 RNLGNLR|ED 0.076 . Tbg972.8.2770 261 LAPLGIK|VQ 0.050 . Tbg972.8.2770 273 HGEQLEK|AG 0.056 . Tbg972.8.2770 284 LIYNVGK|GS 0.068 . Tbg972.8.2770 287 NVGKGSK|HT 0.058 . Tbg972.8.2770 301 FEYVGDK|RS 0.056 . Tbg972.8.2770 302 EYVGDKR|SN 0.168 . Tbg972.8.2770 305 GDKRSNK|AT 0.175 . Tbg972.8.2770 312 ATALVGK|GV 0.082 . Tbg972.8.2770 324 CGGLNIK|PF 0.071 . Tbg972.8.2770 347 TVMATMK|AI 0.069 . Tbg972.8.2770 383 SCILTSR|KG 0.079 . Tbg972.8.2770 384 CILTSRK|GL 0.091 . Tbg972.8.2770 398 NTDAEGR|LV 0.091 . Tbg972.8.2770 410 TLTYLQK|DA 0.075 . Tbg972.8.2770 413 YLQKDAK|LV 0.081 . Tbg972.8.2770 416 KDAKLVK|KA 0.085 . Tbg972.8.2770 417 DAKLVKK|AD 0.102 . Tbg972.8.2770 438 VVGLGSR|RA 0.082 . Tbg972.8.2770 439 VGLGSRR|AG 0.092 . Tbg972.8.2770 458 QLMASGR|SS 0.220 . Tbg972.8.2770 475 IGDEHQR|AI 0.104 . Tbg972.8.2770 478 EHQRAIK|GN 0.128 . Tbg972.8.2770 491 VNVPSVR|EG 0.088 . Tbg972.8.2770 508 LSNFVEK|DV 0.128 . Tbg972.8.2770 511 FVEKDVK|WA 0.062 . Tbg972.8.2770 526 SGMGTDK|PK 0.073 . Tbg972.8.2770 528 MGTDKPK|GF 0.077 . Tbg972.8.2770 548 LLVDYFR|QH 0.070 . Tbg972.8.2770 556 HVMASSK|GV 0.116 . Tbg972.8.2770 562 KGVSTGK|DG 0.079 . Tbg972.8.2770 584 ANAEVSK|EN 0.071 . Tbg972.8.2770 588 VSKENTK|RS 0.059 . Tbg972.8.2770 589 SKENTKR|SK 0.356 . Tbg972.8.2770 591 ENTKRSK|TS 0.064 . Tbg972.8.2770 597 KTSAGGK|KL 0.067 . Tbg972.8.2770 598 TSAGGKK|LT 0.130 . Tbg972.8.2770 601 GGKKLTK|NA 0.084 . Tbg972.8.2770 606 TKNAEPK|EG 0.077 . Tbg972.8.2770 609 AEPKEGK|GK 0.073 . Tbg972.8.2770 611 PKEGKGK|EA 0.080 . Tbg972.8.2770 614 GKGKEAK|PN 0.080 . Tbg972.8.2770 618 EAKPNVK|GT 0.064 . Tbg972.8.2770 621 PNVKGTK|GD 0.075 . Tbg972.8.2770 624 KGTKGDR|KV 0.135 . Tbg972.8.2770 625 GTKGDRK|VG 0.093 . Tbg972.8.2770 629 DRKVGEK|GT 0.083 . Tbg972.8.2770 634 EKGTEGK|GK 0.072 . Tbg972.8.2770 636 GTEGKGK|AA 0.130 . Tbg972.8.2770 643 AASPAEK|KR 0.062 . Tbg972.8.2770 644 ASPAEKK|RV 0.129 . Tbg972.8.2770 645 SPAEKKR|VK 0.210 . Tbg972.8.2770 647 AEKKRVK|KA 0.073 . Tbg972.8.2770 648 EKKRVKK|AP 0.355 . Tbg972.8.2770 653 KKAPAAK|QG 0.074 . Tbg972.8.2770 656 PAAKQGR|RA 0.129 . Tbg972.8.2770 657 AAKQGRR|AV 0.209 . Tbg972.8.2770 660 QGRRAVK|GN 0.166 . Tbg972.8.2770 664 AVKGNPK|GK 0.065 . Tbg972.8.2770 666 KGNPKGK|KR 0.076 . Tbg972.8.2770 667 GNPKGKK|RS 0.112 . Tbg972.8.2770 668 NPKGKKR|SG 0.342 . ____________________________^_________________

  • Fasta :-

    >Tbg972.8.2770 ATGCTCAAGAGAGTTATCGCGAGGGCAAGCCTCCCCAAGTCGTTGGATGTACTGCCACTT TTTTCCTTTTCGAAGAAGGGCAAGGGTGGTATCGAGAAGGTTGCTGGTGACAGCCAAGTA AAAACCCTTGTGTCCCACCCAAAATGCGTGTCGGCACATTTTTGCAATCCTAAGGACCAC TCTGAAACTTTACGTGAAGACGACGATGGAGGTGATGTGGATAAACACGACGCAGTGGAT GTGCCTTTTGGTTTCCGTGATGCACCGGGGAATATTTTGTTGGATCTGGAGCGGCGGCGC CTCTTTGCTGGCATTGGTGAGAAACCAACGGTGCGGGACTATCGCCTAGCCGTGACGGCT GCTGTACGCGAAGCGTCTAAGTTAAAAGCATCAGCACTGGTTATGCGTTCTCTTCCAAAT GTGCTGTATTCAGTTGGAGACTTGTTTCAGCCTGCGAGCGCTCTCCCGGCGGAGGATGTA GCTGAAAAAACGGTTACTTATGCCGTCGCGGCGGCGTATCGGTACGACCGATTTCTATCG AAAGCTAAAGGTGGCTTGCCCCCTCCGCGCCGTGGTAGGCGAAATAAGGCGGTTGCAGAA GGGAGTCATGAGCAGTTGAATTTAATTATTGACTGCGGGGACAAGACTTCTATTGCCAGT GGAAATATCATTGGACATTGCATAAATGACGCACGAAACCTGGGTAATCTTCGTGAGGAT GAGGGCATCCCGCAGTTTTACTGTGAGTGGATTCATCAGGAACTGGCCCCACTTGGCATT AAGGTGCAGAACGTGTTGCACGGAGAGCAGCTTGAGAAGGCGGGGTTGAACCTCATATAC AACGTTGGAAAGGGGTCAAAACACACGCCTTATTTGGTTGTGTTTGAGTACGTCGGTGAC AAGAGGAGCAATAAGGCAACTGCCCTCGTGGGCAAGGGTGTTACATTTGATTGCGGTGGT CTTAACATTAAACCATTCGGGTCGATGGAGACGATGCACATGGATATGATGGGTGCAGCC ACGGTTATGGCTACGATGAAGGCTATCGCCGAACTTCAACTACCAGTTAACGTTGTGGCC GCCGTTGGGCTCGCGGAAAACGCGATCGGTCCAAGCAGCTACCACCCATCATGCATTTTG ACTAGCCGCAAAGGACTAAGTGTTGAGGTGTTGAACACGGATGCCGAGGGGAGGCTTGTA CTTGCTGACACACTGACTTACCTTCAGAAGGACGCTAAACTAGTGAAGAAGGCCGATACG ATCATTGACATTGCGACCCTCACAGGCGCAATTGTTGTCGGCCTTGGGAGCCGGCGTGCA GGTCTCTTTGGCAACGACATCGCGCTGGTGCAGCAGCTTATGGCTAGCGGGCGAAGCAGT GGGGAGGAGGTTTGGCCGATGCCCATCGGGGATGAACACCAGAGGGCGATCAAAGGGAAT ATTGCCGACCTTGTTAACGTACCGAGCGTGCGTGAGGGCGGTTCCTGCACTGCAGCGGCT TTCCTAAGCAACTTTGTGGAGAAAGATGTGAAATGGGCGCATCTTGATATTGCAGGTTCG GGGATGGGGACCGACAAGCCAAAGGGATTCCAACCAGCGGGGGCACCCGGATTTGGTGTT GAGCTTCTGGTGGACTACTTTCGCCAGCACGTCATGGCTTCTTCAAAGGGAGTGTCGACG GGTAAGGATGGAAGCCACGGTGATGCGGAAGAGTCTACTCAAGAAGAGGGTGCTAATGCT GAAGTGAGTAAGGAAAATACCAAAAGATCTAAGACCAGCGCAGGTGGAAAGAAGTTAACG AAAAATGCCGAACCGAAGGAAGGAAAGGGCAAAGAAGCAAAACCCAACGTGAAGGGTACG AAAGGTGACAGAAAGGTTGGAGAAAAAGGCACGGAAGGCAAAGGAAAAGCGGCCAGCCCG GCTGAAAAGAAGAGGGTGAAAAAGGCACCTGCGGCCAAGCAGGGTCGCCGGGCAGTGAAG GGGAACCCGAAAGGAAAGAAAAGGTCTGGCAATTGA
  • Download Fasta

  • Fasta :-

    MLKRVIARASLPKSLDVLPLFSFSKKGKGGIEKVAGDSQVKTLVSHPKCVSAHFCNPKDH SETLREDDDGGDVDKHDAVDVPFGFRDAPGNILLDLERRRLFAGIGEKPTVRDYRLAVTA AVREASKLKASALVMRSLPNVLYSVGDLFQPASALPAEDVAEKTVTYAVAAAYRYDRFLS KAKGGLPPPRRGRRNKAVAEGSHEQLNLIIDCGDKTSIASGNIIGHCINDARNLGNLRED EGIPQFYCEWIHQELAPLGIKVQNVLHGEQLEKAGLNLIYNVGKGSKHTPYLVVFEYVGD KRSNKATALVGKGVTFDCGGLNIKPFGSMETMHMDMMGAATVMATMKAIAELQLPVNVVA AVGLAENAIGPSSYHPSCILTSRKGLSVEVLNTDAEGRLVLADTLTYLQKDAKLVKKADT IIDIATLTGAIVVGLGSRRAGLFGNDIALVQQLMASGRSSGEEVWPMPIGDEHQRAIKGN IADLVNVPSVREGGSCTAAAFLSNFVEKDVKWAHLDIAGSGMGTDKPKGFQPAGAPGFGV ELLVDYFRQHVMASSKGVSTGKDGSHGDAEESTQEEGANAEVSKENTKRSKTSAGGKKLT KNAEPKEGKGKEAKPNVKGTKGDRKVGEKGTEGKGKAASPAEKKRVKKAPAAKQGRRAVK GNPKGKKRSGN

    No Results
  • title: Substrate-binding/catalytic site
  • coordinates: K312,D317,K324,D335,D394,E396,R398,L427
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.8.2770565 SGKDGSHGDA0.997unspTbg972.8.2770565 SGKDGSHGDA0.997unspTbg972.8.2770565 SGKDGSHGDA0.997unspTbg972.8.2770583 SNAEVSKENT0.995unspTbg972.8.2770639 SGKAASPAEK0.994unspTbg972.8.2770459 SASGRSSGEE0.99unspTbg972.8.2770460 SSGRSSGEEV0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India