Tbg972.8.5740 | proteasome 26S non-ATPase subunit 9, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.8.5740OTHER0.9998580.0000990.000043
No Results

  • Fasta :-

    >Tbg972.8.5740 MSGTLLKEELLQLDNKRRSIMRDIEEAMTFLNSTPVGLRGSLVDSEGFPRDDCDLYAVRR ARHTVNCGHNDLKSIEATIHEKLSQLHEECRGEAEEQMQRDKMKKKSEDDQRRRDELKQV MSSKEPFVRVVDVATGSPAEEGGLICGHLIVQYGDVDAEKVLEGGFGEMARVTSSYEGQM LRVWVRSPSDDDCGGARELFIVPQRWRGEGLLGCTFEPMKLN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/196 Sequence name : 196 Sequence length : 222 VALUES OF COMPUTED PARAMETERS Coef20 : 3.990 CoefTot : -0.007 ChDiff : -9 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.624 0.759 -0.065 0.426 MesoH : -1.119 0.065 -0.455 0.138 MuHd_075 : 33.015 20.193 7.499 7.138 MuHd_095 : 7.237 10.382 2.919 1.844 MuHd_100 : 13.137 9.798 3.565 2.906 MuHd_105 : 14.319 8.822 3.965 3.211 Hmax_075 : 11.433 15.867 0.747 4.970 Hmax_095 : -4.638 7.262 -2.347 1.418 Hmax_100 : -6.900 2.200 -3.142 0.420 Hmax_105 : -7.000 3.033 -3.528 1.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8649 0.1351 DFMC : 0.7958 0.2042
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 222 Tbg972.8.5740 MSGTLLKEELLQLDNKRRSIMRDIEEAMTFLNSTPVGLRGSLVDSEGFPRDDCDLYAVRRARHTVNCGHNDLKSIEATIH 80 EKLSQLHEECRGEAEEQMQRDKMKKKSEDDQRRRDELKQVMSSKEPFVRVVDVATGSPAEEGGLICGHLIVQYGDVDAEK 160 VLEGGFGEMARVTSSYEGQMLRVWVRSPSDDDCGGARELFIVPQRWRGEGLLGCTFEPMKLN 240 ................................................................................ 80 ................................................................................ 160 .............................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.8.5740 7 MSGTLLK|EE 0.057 . Tbg972.8.5740 16 LLQLDNK|RR 0.063 . Tbg972.8.5740 17 LQLDNKR|RS 0.103 . Tbg972.8.5740 18 QLDNKRR|SI 0.245 . Tbg972.8.5740 22 KRRSIMR|DI 0.208 . Tbg972.8.5740 39 STPVGLR|GS 0.067 . Tbg972.8.5740 50 DSEGFPR|DD 0.102 . Tbg972.8.5740 59 CDLYAVR|RA 0.076 . Tbg972.8.5740 60 DLYAVRR|AR 0.142 . Tbg972.8.5740 62 YAVRRAR|HT 0.299 . Tbg972.8.5740 73 CGHNDLK|SI 0.104 . Tbg972.8.5740 82 EATIHEK|LS 0.059 . Tbg972.8.5740 91 QLHEECR|GE 0.102 . Tbg972.8.5740 100 AEEQMQR|DK 0.084 . Tbg972.8.5740 102 EQMQRDK|MK 0.072 . Tbg972.8.5740 104 MQRDKMK|KK 0.082 . Tbg972.8.5740 105 QRDKMKK|KS 0.128 . Tbg972.8.5740 106 RDKMKKK|SE 0.291 . Tbg972.8.5740 112 KSEDDQR|RR 0.079 . Tbg972.8.5740 113 SEDDQRR|RD 0.148 . Tbg972.8.5740 114 EDDQRRR|DE 0.147 . Tbg972.8.5740 118 RRRDELK|QV 0.091 . Tbg972.8.5740 124 KQVMSSK|EP 0.066 . Tbg972.8.5740 129 SKEPFVR|VV 0.156 . Tbg972.8.5740 160 GDVDAEK|VL 0.075 . Tbg972.8.5740 171 GFGEMAR|VT 0.139 . Tbg972.8.5740 182 YEGQMLR|VW 0.071 . Tbg972.8.5740 186 MLRVWVR|SP 0.151 . Tbg972.8.5740 197 DDCGGAR|EL 0.091 . Tbg972.8.5740 205 LFIVPQR|WR 0.109 . Tbg972.8.5740 207 IVPQRWR|GE 0.091 . Tbg972.8.5740 220 CTFEPMK|LN 0.060 . ____________________________^_________________

  • Fasta :-

    >Tbg972.8.5740 ATGTCTGGAACTTTACTCAAGGAAGAGCTGCTACAGTTGGACAACAAACGGCGATCCATA ATGAGGGATATCGAGGAAGCCATGACATTCCTCAACTCCACACCAGTAGGGCTTCGCGGC AGTCTTGTGGACAGCGAGGGGTTCCCGCGTGATGATTGCGACCTCTACGCCGTACGTCGT GCACGGCATACTGTAAACTGCGGGCACAATGATCTTAAGTCTATCGAGGCTACCATTCAC GAGAAGCTTTCGCAGCTGCATGAGGAATGCCGCGGGGAGGCGGAGGAGCAGATGCAGCGG GACAAAATGAAGAAGAAATCGGAGGACGATCAACGAAGGCGGGACGAACTAAAGCAGGTG ATGTCCAGCAAAGAGCCATTCGTGCGTGTGGTAGACGTCGCGACTGGCAGCCCAGCTGAG GAAGGAGGCCTTATATGTGGTCACCTCATAGTCCAGTACGGTGACGTAGATGCGGAAAAG GTGTTGGAAGGAGGTTTCGGCGAAATGGCGCGAGTTACATCGAGTTATGAGGGGCAGATG TTGCGAGTGTGGGTACGTTCTCCCAGTGATGATGACTGTGGTGGGGCACGAGAGCTTTTT ATCGTTCCACAGAGATGGAGGGGTGAGGGTCTTTTAGGATGCACATTTGAGCCAATGAAA TTGAATTAG
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  • Fasta :-

    MSGTLLKEELLQLDNKRRSIMRDIEEAMTFLNSTPVGLRGSLVDSEGFPRDDCDLYAVRR ARHTVNCGHNDLKSIEATIHEKLSQLHEECRGEAEEQMQRDKMKKKSEDDQRRRDELKQV MSSKEPFVRVVDVATGSPAEEGGLICGHLIVQYGDVDAEKVLEGGFGEMARVTSSYEGQM LRVWVRSPSDDDCGGARELFIVPQRWRGEGLLGCTFEPMKLN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.8.5740107 SMKKKSEDDQ0.998unspTbg972.8.5740107 SMKKKSEDDQ0.998unspTbg972.8.5740107 SMKKKSEDDQ0.998unspTbg972.8.5740122 SKQVMSSKEP0.994unspTbg972.8.5740174 SARVTSSYEG0.995unspTbg972.8.5740187 SVWVRSPSDD0.997unspTbg972.8.574019 SNKRRSIMRD0.996unspTbg972.8.574041 SGLRGSLVDS0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India